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Moc03g03330 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g03330
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:2525679..2528173
RNA-Seq ExpressionMoc03g03330
SyntenyMoc03g03330
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146110.1 uncharacterized protein LOC111015405 [Momordica charantia]5.5e-1663.64Show/hide
Query:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCA------------LEADLRR---KEFAAPTEELELVPLLSPGKQGQLTTRPQG
        + LKY TPNGVGTVRGEQ  SRECYASALKGSS CA            LEADL R   +EF+APTEELELVPLLS  KQ  L   P G
Subjt:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCA------------LEADLRR---KEFAAPTEELELVPLLSPGKQGQLTTRPQG

XP_022152110.1 uncharacterized protein LOC111019899 [Momordica charantia]1.1e-1664.13Show/hide
Query:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL------------EADLRRKEFAAPTEELELVPLLSPGKQGQL
        RA P++ H     +VLKY TPNGVGTVRGEQ ASRECYAS LKG+SVCAL            EADL  +EFAAP EELELVPLLS  KQ QL
Subjt:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL------------EADLRRKEFAAPTEELELVPLLSPGKQGQL

XP_022155866.1 uncharacterized protein LOC111022880 [Momordica charantia]1.1e-1971.26Show/hide
Query:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL----------EADLRRKEFAAPTEELELVPLLSPGKQ
        RA P++ H     +VLKYPTPNGVGTVRGEQAASRECYA+ALKG SVCAL          EA+L RKEFAAPTEELELVPLLSP KQ
Subjt:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL----------EADLRRKEFAAPTEELELVPLLSPGKQ

XP_022157676.1 uncharacterized protein LOC111024332 [Momordica charantia]5.3e-1977.03Show/hide
Query:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCA----------LEADLRRKEFAAPTEELELVPLLSPGKQ
        +VLKY TPNGVGTVRGEQ  SRECYA+ALKGSSVCA          LEADL RKEFAAPTEELELVPLLSP KQ
Subjt:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCA----------LEADLRRKEFAAPTEELELVPLLSPGKQ

XP_022158219.1 protein NYNRIN-like [Momordica charantia]9.9e-1873.68Show/hide
Query:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCALE------------ADLRRKEFAAPTEELELVPLLSPGKQ
        +VLKY TPNGVGTVRGEQ ASRECYASALKGSSVCALE            ADL R+EF+APTEELELVPLLS  KQ
Subjt:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCALE------------ADLRRKEFAAPTEELELVPLLSPGKQ

TrEMBL top hitse value%identityAlignment
A0A6J1DD03 uncharacterized protein LOC1110198995.3e-1764.13Show/hide
Query:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL------------EADLRRKEFAAPTEELELVPLLSPGKQGQL
        RA P++ H     +VLKY TPNGVGTVRGEQ ASRECYAS LKG+SVCAL            EADL  +EFAAP EELELVPLLS  KQ QL
Subjt:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL------------EADLRRKEFAAPTEELELVPLLSPGKQGQL

A0A6J1DT04 uncharacterized protein LOC1110228805.1e-2071.26Show/hide
Query:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL----------EADLRRKEFAAPTEELELVPLLSPGKQ
        RA P++ H     +VLKYPTPNGVGTVRGEQAASRECYA+ALKG SVCAL          EA+L RKEFAAPTEELELVPLLSP KQ
Subjt:  RAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL----------EADLRRKEFAAPTEELELVPLLSPGKQ

A0A6J1DXB1 uncharacterized protein LOC1110254122.6e-1670.51Show/hide
Query:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL------------EADLRR---KEFAAPTEELELVPLLSPGK
        +VLKY TPNGVGTVRGEQ ASRECYASALKGS VCAL            EADL R   +EF+APTEELELVPLLSP K
Subjt:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCAL------------EADLRR---KEFAAPTEELELVPLLSPGK

A0A6J1DYS0 Ribonuclease H4.8e-1873.68Show/hide
Query:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCALE------------ADLRRKEFAAPTEELELVPLLSPGKQ
        +VLKY TPNGVGTVRGEQ ASRECYASALKGSSVCALE            ADL R+EF+APTEELELVPLLS  KQ
Subjt:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCALE------------ADLRRKEFAAPTEELELVPLLSPGKQ

A0A6J1DYW5 uncharacterized protein LOC1110243322.6e-1977.03Show/hide
Query:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCA----------LEADLRRKEFAAPTEELELVPLLSPGKQ
        +VLKY TPNGVGTVRGEQ  SRECYA+ALKGSSVCA          LEADL RKEFAAPTEELELVPLLSP KQ
Subjt:  RVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCA----------LEADLRRKEFAAPTEELELVPLLSPGKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGGTCGCAATTGAAGAGGAGCCCGACACCGCTGGTCGGGTTCTCTGGAGAATCGGTCATCCCAGAGGGTTGCATCGACTTGCCGGTCACGTAAGGGCAGGACC
AAACTCGGGTCACTCAAATGGCCGAGTTCGTGTTTTGAAGTATCCCACCCCCAATGGCGTGGGCACGGTCCGAGGAGAACAGGCCGCTTCGAGGGAGTGTTATGCCTCCG
CACTCAAAGGCTCATCGGTCTGCGCCCTCGAGGCCGACCTGCGGAGGAAGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGGGAAGCAG
GGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGCTCGGTTCGTGGTCCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTAT
TGAGATGCCTAACCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGGTCGCAATTGAAGAGGAGCCCGACACCGCTGGTCGGGTTCTCTGGAGAATCGGTCATCCCAGAGGGTTGCATCGACTTGCCGGTCACGTAAGGGCAGGACC
AAACTCGGGTCACTCAAATGGCCGAGTTCGTGTTTTGAAGTATCCCACCCCCAATGGCGTGGGCACGGTCCGAGGAGAACAGGCCGCTTCGAGGGAGTGTTATGCCTCCG
CACTCAAAGGCTCATCGGTCTGCGCCCTCGAGGCCGACCTGCGGAGGAAGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGGGAAGCAG
GGGCAACTCACCACAAGACCCCAAGGAGCGCAGAAAGTTGGCAAGGCGGGCAGCTCGGTTCGTGGTCCGAGATGGGGCATTGTACCGACGTGGCTTTTCCCTGCCTCTAT
TGAGATGCCTAACCCCTGA
Protein sequenceShow/hide protein sequence
MDEVAIEEEPDTAGRVLWRIGHPRGLHRLAGHVRAGPNSGHSNGRVRVLKYPTPNGVGTVRGEQAASRECYASALKGSSVCALEADLRRKEFAAPTEELELVPLLSPGKQ
GQLTTRPQGAQKVGKAGSSVRGPRWGIVPTWLFPASIEMPNP