; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g03400 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g03400
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Genome locationchr3:2551139..2553433
RNA-Seq ExpressionMoc03g03400
SyntenyMoc03g03400
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
VFQ67221.1 unnamed protein product [Cuscuta campestris]6.2e-0636.14Show/hide
Query:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN
        FR++    + G +  +WKMQ+ DLL  K +   LGD+L +M+D DW+ +D +A++ IR+SL+ NV   ++KE   K +++  +
Subjt:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN

VFQ91176.1 unnamed protein product [Cuscuta campestris]6.2e-0637.35Show/hide
Query:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN
        FR++    + G N  +WKMQ+ DLL  K +   LGD+  +M+D DW+ +D +A++ IR+SL+ NV   ++KE   K +L+  +
Subjt:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN

VFQ97324.1 unnamed protein product [Cuscuta campestris]8.1e-0634.94Show/hide
Query:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN
        FR++    + G +  +W+MQ+ DLL  K +   LGD+L +M++ DW+ +D +A++ IR+SL+ NV   ++KET  K +++  +
Subjt:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN

XP_022152155.1 cinnamoyl-CoA reductase-like SNL6 [Momordica charantia]1.5e-1253.92Show/hide
Query:  VVAIGHKRFSVYVSEFEVARGSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRE
        VVA GHKR  VYVSEFEVA+GS RQ MHKV A  S R L+  A L  +TD KNLPS QV+QL S  KG  N +       R     VR   +L+K HRR 
Subjt:  VVAIGHKRFSVYVSEFEVARGSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRE

Query:  SA
        SA
Subjt:  SA

XP_022157059.1 uncharacterized protein LOC111023870 [Momordica charantia]1.9e-0748.81Show/hide
Query:  GSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRESAWR
        GS RQ MH+VA D SGRDLK    L  RTD KNLPS  V+QL S  KG  N +       +     VRR+ +L+K HRR SA++
Subjt:  GSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRESAWR

TrEMBL top hitse value%identityAlignment
A0A484KML8 Uncharacterized protein3.0e-0636.14Show/hide
Query:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN
        FR++    + G +  +WKMQ+ DLL  K +   LGD+L +M+D DW+ +D +A++ IR+SL+ NV   ++KE   K +++  +
Subjt:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN

A0A484MST0 CCHC-type domain-containing protein3.0e-0637.35Show/hide
Query:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN
        FR++    + G N  +WKMQ+ DLL  K +   LGD+  +M+D DW+ +D +A++ IR+SL+ NV   ++KE   K +L+  +
Subjt:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN

A0A484NBU0 CCHC-type domain-containing protein3.9e-0634.94Show/hide
Query:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN
        FR++    + G +  +W+MQ+ DLL  K +   LGD+L +M++ DW+ +D +A++ IR+SL+ NV   ++KET  K +++  +
Subjt:  FRVDHDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFN

A0A6J1DD48 cinnamoyl-CoA reductase-like SNL67.4e-1353.92Show/hide
Query:  VVAIGHKRFSVYVSEFEVARGSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRE
        VVA GHKR  VYVSEFEVA+GS RQ MHKV A  S R L+  A L  +TD KNLPS QV+QL S  KG  N +       R     VR   +L+K HRR 
Subjt:  VVAIGHKRFSVYVSEFEVARGSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRE

Query:  SA
        SA
Subjt:  SA

A0A6J1DVE9 uncharacterized protein LOC1110238709.3e-0848.81Show/hide
Query:  GSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRESAWR
        GS RQ MH+VA D SGRDLK    L  RTD KNLPS  V+QL S  KG  N +       +     VRR+ +L+K HRR SA++
Subjt:  GSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRESAWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCCCAAAGTCTCCGAATTCTAATGCAAATGCCTTGGCACGGCTCATTGGAGTATACGAAACCAACTTGCCACGAGTAGTCACTGGTGGGATTGGTGGAGCCAA
AACGACGTCGAATCAAGCTTGGACGCGTCGGGGTCGAAACGAGGATGAAAAACAGGGGAAGCGATCGCTGCAAGCCAGGAGAACTGAAGCTGCAGTGTCGTGGCACTATA
GAGGGCGTCGTGGCGCTGTCAAAGGGGGCGCGGGCGCGCCGATTTTGAGTGGGTTTTGGCAGCAAATTAGTGACAGTGGCTCGGGCATTGGCAGAGGCTTTAGGGTTGAT
CATGATCGACATTATCGGGGAGAGAATGTCAGGTTTTGGAAGATGCAGGTAAATGATCTTCTTACATGCAAGAAGATACACAAGACTTTGGGGGATAGACTAGCGGAGAT
GACAGATAAGGATTGGAGTGAGATGGATGAGCAGGCCGTTGCAAACATCAGAATGTCTTTGTCGATGAATGTTTGCAGTTTGGTGGTGAAAGAGACTATAACAAAGGTAC
TATTGAAGACTTTTAATGAGTTCGTTGGGAGTTGCTGGAAGCTCAAGATGGAATCCAGGGTGGTGGCAATAGGCCACAAGAGATTTTCTGTTTATGTGTCTGAGTTTGAG
GTTGCCAGAGGATCTGAGAGACAGAAGATGCACAAAGTAGCTGCAGATGATTCAGGACGAGACTTAAAAGAATCAGCAGTATTGACAACTAGGACAGATCATAAGAATTT
GCCATCAGTTCAAGTACAACAGTTGGGAAGTAGAGGAAAGGGTAAGAGGAACAACTTAGTGAGGTGTTCGACAAGTTGTCGGTTTCAAGCCCTAGTTGTTAGACGAAATA
GCAAGCTGATGAAGTTGCATAGGCGAGAGAGTGCATGGAGGGAGAAGACTAGAGTTGATACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCCCAAAGTCTCCGAATTCTAATGCAAATGCCTTGGCACGGCTCATTGGAGTATACGAAACCAACTTGCCACGAGTAGTCACTGGTGGGATTGGTGGAGCCAA
AACGACGTCGAATCAAGCTTGGACGCGTCGGGGTCGAAACGAGGATGAAAAACAGGGGAAGCGATCGCTGCAAGCCAGGAGAACTGAAGCTGCAGTGTCGTGGCACTATA
GAGGGCGTCGTGGCGCTGTCAAAGGGGGCGCGGGCGCGCCGATTTTGAGTGGGTTTTGGCAGCAAATTAGTGACAGTGGCTCGGGCATTGGCAGAGGCTTTAGGGTTGAT
CATGATCGACATTATCGGGGAGAGAATGTCAGGTTTTGGAAGATGCAGGTAAATGATCTTCTTACATGCAAGAAGATACACAAGACTTTGGGGGATAGACTAGCGGAGAT
GACAGATAAGGATTGGAGTGAGATGGATGAGCAGGCCGTTGCAAACATCAGAATGTCTTTGTCGATGAATGTTTGCAGTTTGGTGGTGAAAGAGACTATAACAAAGGTAC
TATTGAAGACTTTTAATGAGTTCGTTGGGAGTTGCTGGAAGCTCAAGATGGAATCCAGGGTGGTGGCAATAGGCCACAAGAGATTTTCTGTTTATGTGTCTGAGTTTGAG
GTTGCCAGAGGATCTGAGAGACAGAAGATGCACAAAGTAGCTGCAGATGATTCAGGACGAGACTTAAAAGAATCAGCAGTATTGACAACTAGGACAGATCATAAGAATTT
GCCATCAGTTCAAGTACAACAGTTGGGAAGTAGAGGAAAGGGTAAGAGGAACAACTTAGTGAGGTGTTCGACAAGTTGTCGGTTTCAAGCCCTAGTTGTTAGACGAAATA
GCAAGCTGATGAAGTTGCATAGGCGAGAGAGTGCATGGAGGGAGAAGACTAGAGTTGATACTTAA
Protein sequenceShow/hide protein sequence
MSIPKSPNSNANALARLIGVYETNLPRVVTGGIGGAKTTSNQAWTRRGRNEDEKQGKRSLQARRTEAAVSWHYRGRRGAVKGGAGAPILSGFWQQISDSGSGIGRGFRVD
HDRHYRGENVRFWKMQVNDLLTCKKIHKTLGDRLAEMTDKDWSEMDEQAVANIRMSLSMNVCSLVVKETITKVLLKTFNEFVGSCWKLKMESRVVAIGHKRFSVYVSEFE
VARGSERQKMHKVAADDSGRDLKESAVLTTRTDHKNLPSVQVQQLGSRGKGKRNNLVRCSTSCRFQALVVRRNSKLMKLHRRESAWREKTRVDT