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Moc03g03890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g03890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:2874108..2877439
RNA-Seq ExpressionMoc03g03890
SyntenyMoc03g03890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143639.1 uncharacterized protein LOC111013500 [Momordica charantia]7.8e-2275.95Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLK
        MKVNDE +TFNVLD  RLPDEVE+CS +GAIMEELQ+M+VEDLEADLEAAEKE+    G ILP FE FE  QPTIADLK
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLK

XP_022150857.1 uncharacterized protein LOC111018901 [Momordica charantia]1.0e-1881.43Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEF
        MKVNDE VTFNVLDAMRLPD+VEECST+GAIMEELQQM+VEDLEADLE AEKES     AILPQFE   F
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEF

XP_030479560.1 uncharacterized protein LOC115696816 [Cannabis sativa]9.5e-2047.92Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAE-KESKIAPGAILPQFER-FEFLQPTIADLKTLQPSI
        M+VND+ +TFNV +AMR PDE+++CS +  I              +E     +EDLEA  E  E + + +AP    P+F+R FE L+   ++ K  +PSI
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAE-KESKIAPGAILPQFER-FEFLQPTIADLKTLQPSI

Query:  IEPSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ
         EP ELE KPLPSHLKYAYLG N+TLPVIIS+ L  E E LLL+
Subjt:  IEPSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ

XP_030485610.1 uncharacterized protein LOC115702304 [Cannabis sativa]3.1e-1846.53Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKE-SKIAPGAILPQFER-FEFLQPTIADLKTLQPSI
        M+VND+ VTFNV +AMR  DE+EECS +  I              +E     +EDLEA  E  E + + + P    P+F+R FE L+   ++ K  +PSI
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKE-SKIAPGAILPQFER-FEFLQPTIADLKTLQPSI

Query:  IEPSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ
         EP +LE KPLPSHLKYAYLG N+ LP+IIS+ L  E E LLL+
Subjt:  IEPSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ

XP_030504461.1 uncharacterized protein LOC115719521 [Cannabis sativa]5.9e-2250Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKE-SKIAPGAILPQFER-FEFLQPTIADLKTLQPSI
        M+VND+ VTFNV +AMR PDE+EECS +  I              +E     +EDLEA  E  E + S + P    P+F+R FE L+   ++ K L+PSI
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKE-SKIAPGAILPQFER-FEFLQPTIADLKTLQPSI

Query:  IEPSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ
         EP +LE KPLPSHLKYAYLG N+TLPVIIS++L  E E LLL+
Subjt:  IEPSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ

TrEMBL top hitse value%identityAlignment
A0A2G9HWF8 Reverse transcriptase2.7e-1239.44Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLKTLQPSIIE
        M+V D+ +TFNV  AM+ P+E +EC ++                ++ L++ + + L+ D E   +  K    +   +    E L+ T A  K L+PSI E
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLKTLQPSIIE

Query:  PSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ
        P  LE KPLPSHL YAYLG +DTLPVIISS LS+     LL+
Subjt:  PSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ

A0A2G9HYA0 Reverse transcriptase4.6e-1238.03Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLKTLQPSIIE
        M+V D+ +TFNV  AM+ P+E +EC  +                ++ L++ +++ L+ + E   +  K    +   +  R E L+ T    K L+PSI +
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAI-------------MEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLKTLQPSIIE

Query:  PSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ
        P  LE KPLPSHL YAYLG +DTLPVIISS LS+     LL+
Subjt:  PSELEKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ

A0A2G9IA86 DNA-directed DNA polymerase3.2e-1341.3Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMG---------AIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLKTLQPSIIEPSEL
        M+V D+ +TFNV  AM+ P+E +EC T+          +I + L++ +++ L+ D E   +  K   G+   +    E L+ T A  K L+PSI E   L
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMG---------AIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLKTLQPSIIEPSEL

Query:  EKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ
        E KPLPSHL Y YLG +DTLPVIISS LS+     LL+
Subjt:  EKKPLPSHLKYAYLGLNDTLPVIISSYLSNEHESLLLQ

A0A6J1CPX1 uncharacterized protein LOC1110135003.8e-2275.95Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLK
        MKVNDE +TFNVLD  RLPDEVE+CS +GAIMEELQ+M+VEDLEADLEAAEKE+    G ILP FE FE  QPTIADLK
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLK

A0A6J1DBX0 uncharacterized protein LOC1110189015.1e-1981.43Show/hide
Query:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEF
        MKVNDE VTFNVLDAMRLPD+VEECST+GAIMEELQQM+VEDLEADLE AEKES     AILPQFE   F
Subjt:  MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTCAATGATGAGCTGGTAACCTTCAATGTCCTCGATGCGATGCGTCTCCCAGATGAAGTCGAGGAGTGCTCTACAATGGGGGCAATCATGGAGGAACTC
CAGCAAATGATGGTGGAAGACTTAGAAGCAGATTTGGAGGCCGCAGAAAAAGAATCCAAAATTGCGCCTGGCGCAATTTTGCCTCAATTTGAGCGTTTTGAGTTT
TTGCAACCAACAATAGCAGATTTGAAGACCTTGCAACCTTCCATCATTGAACCTTCAGAATTGGAAAAGAAACCCCTACCTTCTCATTTAAAATATGCTTATTTG
GGTTTAAACGATACTTTGCCTGTTATTATTTCTTCATATTTGTCTAATGAACATGAATCTTTGCTTTTACAGGATCAAGATTCGACCTCGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTCAATGATGAGCTGGTAACCTTCAATGTCCTCGATGCGATGCGTCTCCCAGATGAAGTCGAGGAGTGCTCTACAATGGGGGCAATCATGGAGGAACTC
CAGCAAATGATGGTGGAAGACTTAGAAGCAGATTTGGAGGCCGCAGAAAAAGAATCCAAAATTGCGCCTGGCGCAATTTTGCCTCAATTTGAGCGTTTTGAGTTT
TTGCAACCAACAATAGCAGATTTGAAGACCTTGCAACCTTCCATCATTGAACCTTCAGAATTGGAAAAGAAACCCCTACCTTCTCATTTAAAATATGCTTATTTG
GGTTTAAACGATACTTTGCCTGTTATTATTTCTTCATATTTGTCTAATGAACATGAATCTTTGCTTTTACAGGATCAAGATTCGACCTCGTCATAA
Protein sequenceShow/hide protein sequence
MKVNDELVTFNVLDAMRLPDEVEECSTMGAIMEELQQMMVEDLEADLEAAEKESKIAPGAILPQFERFEFLQPTIADLKTLQPSIIEPSELEKKPLPSHLKYAYL
GLNDTLPVIISSYLSNEHESLLLQDQDSTSS