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Moc03g04100 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04100
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr3:3032812..3033277
RNA-Seq ExpressionMoc03g04100
SyntenyMoc03g04100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150317.1 uncharacterized protein LOC111018514 [Momordica charantia]1.3e-1247.06Show/hide
Query:  YKQSYTPLGF--------------PNQTT--LPSHN------TISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSR
        YKQ Y P  F               NQ T   P+HN       + KE  A  + L+QSQN  IQ+QAA  RNLEVQMGQ   +LK   QG+ P H E  +
Subjt:  YKQSYTPLGF--------------PNQTT--LPSHN------TISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSR

Query:  HDGKEQCKTVTTRSGLSYE
         DG EQCK VT RSGLSYE
Subjt:  HDGKEQCKTVTTRSGLSYE

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]6.1e-1036.67Show/hide
Query:  PYKQSYTP---LGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSY
        P  Q Y P     +  +T  P     +     ++   +   + +IQSQAAS RN E Q+GQL  ELK   QG+ P H E  + +GKEQCK VT RSGL+Y
Subjt:  PYKQSYTP---LGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSY

Query:  EELVLTNEGIDASTSLPTLE
        +E  +    +   ++ PT++
Subjt:  EELVLTNEGIDASTSLPTLE

XP_030505184.1 uncharacterized protein LOC115720166 [Cannabis sativa]2.3e-0945.74Show/hide
Query:  KQSYTPLGFPNQTTLPSH--NTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSG
        +Q+Y P GF  Q   P H  N+      +L+   +   + +IQSQAA  RNLE+Q+G L  ELK   QG+LP   EN R DGKEQCK++  RSG
Subjt:  KQSYTPLGFPNQTTLPSH--NTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSG

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]4.7e-1045.71Show/hide
Query:  KQSYTPLGFPNQTTLPSHNTISKEPRALINVL---IQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEE
        KQS+ P GF  Q    SH     +  +L +++   +   + +IQSQAAS RNLEVQ+GQL  +LK   QG LP   EN R DGKE CK +T RSG   E 
Subjt:  KQSYTPLGFPNQTTLPSHNTISKEPRALINVL---IQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEE

Query:  LVLTN
         V+ N
Subjt:  LVLTN

XP_030510138.1 uncharacterized protein LOC115724905 [Cannabis sativa]1.2e-1047.62Show/hide
Query:  KQSYTPLGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVL
        KQS+ P GF  Q   P  +  S    +L+   +   + +IQSQAAS RNLEVQ+GQL  +LK   QG LP   EN R D KE CK VT RSG   E  V+
Subjt:  KQSYTPLGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVL

Query:  TNEGI
        T E I
Subjt:  TNEGI

TrEMBL top hitse value%identityAlignment
A0A5B6UVX9 Serine/threonine-protein kinase atg1-like3.6e-0841.41Show/hide
Query:  PLGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVLTNEG
        PL +  Q   P     S     L+ V I   +MLIQS+A    NL  Q+GQL  EL+   QG LP + +N R  GKE CK +T RSG + E  V+  EG
Subjt:  PLGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVLTNEG

A0A6J1DAE9 uncharacterized protein LOC1110185146.4e-1347.06Show/hide
Query:  YKQSYTPLGF--------------PNQTT--LPSHN------TISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSR
        YKQ Y P  F               NQ T   P+HN       + KE  A  + L+QSQN  IQ+QAA  RNLEVQMGQ   +LK   QG+ P H E  +
Subjt:  YKQSYTPLGF--------------PNQTT--LPSHN------TISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSR

Query:  HDGKEQCKTVTTRSGLSYE
         DG EQCK VT RSGLSYE
Subjt:  HDGKEQCKTVTTRSGLSYE

A0A6J1DW02 uncharacterized protein LOC1110248975.6e-0946.75Show/hide
Query:  LIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVLTNEGIDASTSLPTLE
        +IQSQAAS RN   Q+G L  ELK   QG+ P H E  R +GKEQCK VT RSGL+Y+   +    +   ++ PT++
Subjt:  LIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVLTNEGIDASTSLPTLE

A0A6J1DYG0 uncharacterized protein LOC1110257643.0e-1036.67Show/hide
Query:  PYKQSYTP---LGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSY
        P  Q Y P     +  +T  P     +     ++   +   + +IQSQAAS RN E Q+GQL  ELK   QG+ P H E  + +GKEQCK VT RSGL+Y
Subjt:  PYKQSYTP---LGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSY

Query:  EELVLTNEGIDASTSLPTLE
        +E  +    +   ++ PT++
Subjt:  EELVLTNEGIDASTSLPTLE

A0A6J1DZC3 uncharacterized protein LOC1110244495.6e-0952.05Show/hide
Query:  ASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVLTNEGIDASTSLPTLESE
        A+ RNLE QMGQL  ELK   +G LP   E  + +G+E CKT+TTRSGL+YEE  +  EG    +S PT E E
Subjt:  ASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVLTNEGIDASTSLPTLESE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCATACAAACAAAGCTACACTCCACTTGGATTTCCTAATCAAACGACATTACCATCGCACAATACAATCAGCAAAGAACCTCGAGCGCTAATAAACGTGCTGAT
ACAAAGCCAGAACATGCTGATTCAAAGCCAAGCAGCCTCTTCAAGAAATCTTGAGGTGCAGATGGGCCAGCTTGTTAAAGAACTCAAGACCATATCGCAAGGTGCTTTAC
CAGAGCATATGGAGAACTCTAGGCATGACGGTAAAGAACAATGCAAGACGGTGACAACGCGGAGTGGATTGTCCTATGAGGAGCTAGTGTTAACAAATGAGGGAATTGAT
GCTTCTACATCCTTACCTACATTAGAGTCAGAAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACCATACAAACAAAGCTACACTCCACTTGGATTTCCTAATCAAACGACATTACCATCGCACAATACAATCAGCAAAGAACCTCGAGCGCTAATAAACGTGCTGAT
ACAAAGCCAGAACATGCTGATTCAAAGCCAAGCAGCCTCTTCAAGAAATCTTGAGGTGCAGATGGGCCAGCTTGTTAAAGAACTCAAGACCATATCGCAAGGTGCTTTAC
CAGAGCATATGGAGAACTCTAGGCATGACGGTAAAGAACAATGCAAGACGGTGACAACGCGGAGTGGATTGTCCTATGAGGAGCTAGTGTTAACAAATGAGGGAATTGAT
GCTTCTACATCCTTACCTACATTAGAGTCAGAAATTTAG
Protein sequenceShow/hide protein sequence
MKPYKQSYTPLGFPNQTTLPSHNTISKEPRALINVLIQSQNMLIQSQAASSRNLEVQMGQLVKELKTISQGALPEHMENSRHDGKEQCKTVTTRSGLSYEELVLTNEGID
ASTSLPTLESEI