; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04140 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04140
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:3054607..3055515
RNA-Seq ExpressionMoc03g04140
SyntenyMoc03g04140
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144033.1 uncharacterized protein LOC111013825 [Momordica charantia]2.2e-3986Show/hide
Query:  KNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF
        K+SNQQAESSYNP+  EGVITREEFDQLKSKFDAQVEALKARCE K S FDDGDLGESPFTSDI EA IP KFKTPTM PYDGSKDPKDYVEV E LM+F
Subjt:  KNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF

XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]6.0e-6170.59Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYI------------------------PCSHKNSNQQAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSE+R AR+++ EQ   HL PV + HP G EDEEY                          CSH+NSNQQAESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYI------------------------PCSHKNSNQQAESSYNP

Query:  VVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF
        +  EGVITREEFDQLKSKFDAQVEALKA+CE K S+FDDGDLGESPFTSDI EALIP KFKTPTMKPYDGSKDPKDYVEVFEGLMDF
Subjt:  VVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]9.9e-5653.26Show/hide
Query:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR
        MVQPANSTNTADRRALAAN GHQREVG EV EGQ HE LGTEPL RSARITTPVLPPAHPKPSK                                    
Subjt:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL
                                                                           AESSYNP+   GVITREEFDQLKSKFDAQVEAL
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL

Query:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF
        KARCE K S+FDDGDLGE  F+SDI EALIP KFKTPTMKPYDGSKDPKDYVEVFE LMDF
Subjt:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]2.4e-6271.5Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGD-------------EDEEYIPCSHKNSNQQAESSYNPVVHEGVIT
        MEAMRTQMRTMEEMYN+MVQ AGA SRS D+   ++V EQGDLH DPVDEEH GGD               E      HKNSNQQAESSYNP+  EGVIT
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGD-------------EDEEYIPCSHKNSNQQAESSYNPVVHEGVIT

Query:  REEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV
        REEF+QLKSKFDAQVEALK RCE K SAFDDGDLGESPFTSDI EA IP KFKTPTMK YDGSKDPKDYVEVFEGLMDF     A + RAF +
Subjt:  REEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]7.7e-10980.36Show/hide
Query:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR
        MVQP +STNT DRRAL ANDGHQREVG EV EGQIHEGLGTEP  RSARITTP L PAHPKP KANRGRGGASRRTT GAAPAP+RENFDALQKEMEAMR
Subjt:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL
        TQM TMEEMYNEMVQA GAGSRSEDRAARD   E+GDL  D +  +            CSHKNSNQQAESSYNPVV EGVITREEFDQLKSKFDAQVE L
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL

Query:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV
        KARCEVK S FDDGDLGESPFTSDI EALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLM F     A + RAF +
Subjt:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV

TrEMBL top hitse value%identityAlignment
A0A6J1CS66 uncharacterized protein LOC1110138251.1e-3986Show/hide
Query:  KNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF
        K+SNQQAESSYNP+  EGVITREEFDQLKSKFDAQVEALKARCE K S FDDGDLGESPFTSDI EA IP KFKTPTM PYDGSKDPKDYVEV E LM+F
Subjt:  KNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF

A0A6J1DDW5 uncharacterized protein LOC1110196342.9e-6170.59Show/hide
Query:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYI------------------------PCSHKNSNQQAESSYNP
        MRTQM TME+MY+EMVQAAGA SRSE+R AR+++ EQ   HL PV + HP G EDEEY                          CSH+NSNQQAESSYNP
Subjt:  MRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYI------------------------PCSHKNSNQQAESSYNP

Query:  VVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF
        +  EGVITREEFDQLKSKFDAQVEALKA+CE K S+FDDGDLGESPFTSDI EALIP KFKTPTMKPYDGSKDPKDYVEVFEGLMDF
Subjt:  VVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF

A0A6J1DHB3 uncharacterized protein LOC1110204794.8e-5653.26Show/hide
Query:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR
        MVQPANSTNTADRRALAAN GHQREVG EV EGQ HE LGTEPL RSARITTPVLPPAHPKPSK                                    
Subjt:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL
                                                                           AESSYNP+   GVITREEFDQLKSKFDAQVEAL
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL

Query:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF
        KARCE K S+FDDGDLGE  F+SDI EALIP KFKTPTMKPYDGSKDPKDYVEVFE LMDF
Subjt:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF

A0A6J1DPN4 uncharacterized protein LOC1110230601.2e-6271.5Show/hide
Query:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGD-------------EDEEYIPCSHKNSNQQAESSYNPVVHEGVIT
        MEAMRTQMRTMEEMYN+MVQ AGA SRS D+   ++V EQGDLH DPVDEEH GGD               E      HKNSNQQAESSYNP+  EGVIT
Subjt:  MEAMRTQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGD-------------EDEEYIPCSHKNSNQQAESSYNPVVHEGVIT

Query:  REEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV
        REEF+QLKSKFDAQVEALK RCE K SAFDDGDLGESPFTSDI EA IP KFKTPTMK YDGSKDPKDYVEVFEGLMDF     A + RAF +
Subjt:  REEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV

A0A6J1DZJ1 uncharacterized protein LOC1110257383.7e-10980.36Show/hide
Query:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR
        MVQP +STNT DRRAL ANDGHQREVG EV EGQIHEGLGTEP  RSARITTP L PAHPKP KANRGRGGASRRTT GAAPAP+RENFDALQKEMEAMR
Subjt:  MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMR

Query:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL
        TQM TMEEMYNEMVQA GAGSRSEDRAARD   E+GDL  D +  +            CSHKNSNQQAESSYNPVV EGVITREEFDQLKSKFDAQVE L
Subjt:  TQMRTMEEMYNEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEAL

Query:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV
        KARCEVK S FDDGDLGESPFTSDI EALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLM F     A + RAF +
Subjt:  KARCEVKWSAFDDGDLGESPFTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDF--PDRAFRQRAFVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAACCAGCAAACTCAACCAACACAGCAGACCGAAGAGCTCTGGCTGCCAACGATGGTCACCAGAGGGAGGTCGGGGTAGAAGTGGCAGAGGGCCAGATTCATGA
AGGCCTTGGGACCGAGCCGCTCCGTAGGTCGGCACGCATCACCACGCCCGTTCTGCCACCGGCACATCCAAAACCGTCCAAGGCCAATCGCGGCCGAGGTGGTGCCTCGA
GAAGAACCACTCGAGGAGCAGCCCCAGCTCCTACTAGGGAGAACTTTGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACCCAGATGCGCACCATGGAAGAGATGTAC
AACGAAATGGTGCAAGCTGCGGGTGCCGGGTCTCGATCTGAAGACCGAGCGGCGCGCGACGAGGTGTGTGAACAAGGAGATCTTCACCTCGACCCAGTCGATGAAGAGCA
CCCTGGAGGAGATGAAGATGAGGAGTACATTCCTTGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCTTCTTACAACCCAGTAGTTCATGAGGGAGTGATTACAAGGG
AAGAGTTCGACCAGCTTAAAAGCAAATTCGACGCTCAGGTTGAAGCCTTAAAGGCAAGGTGCGAGGTCAAATGGAGCGCATTTGATGATGGCGACTTGGGAGAGTCACCA
TTCACCTCGGATATCTTTGAGGCTCTCATCCCCTCAAAGTTCAAGACTCCCACTATGAAACCGTATGACGGGTCTAAGGACCCAAAAGACTATGTTGAGGTCTTCGAAGG
CCTCATGGATTTTCCAGATCGCGCTTTCCGGCAGCGCGCGTTTGTGGTACAGAAGATTGTCGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCAACCAGCAAACTCAACCAACACAGCAGACCGAAGAGCTCTGGCTGCCAACGATGGTCACCAGAGGGAGGTCGGGGTAGAAGTGGCAGAGGGCCAGATTCATGA
AGGCCTTGGGACCGAGCCGCTCCGTAGGTCGGCACGCATCACCACGCCCGTTCTGCCACCGGCACATCCAAAACCGTCCAAGGCCAATCGCGGCCGAGGTGGTGCCTCGA
GAAGAACCACTCGAGGAGCAGCCCCAGCTCCTACTAGGGAGAACTTTGATGCACTCCAGAAAGAAATGGAGGCAATGCGCACCCAGATGCGCACCATGGAAGAGATGTAC
AACGAAATGGTGCAAGCTGCGGGTGCCGGGTCTCGATCTGAAGACCGAGCGGCGCGCGACGAGGTGTGTGAACAAGGAGATCTTCACCTCGACCCAGTCGATGAAGAGCA
CCCTGGAGGAGATGAAGATGAGGAGTACATTCCTTGCTCGCACAAGAACTCCAACCAGCAGGCCGAATCTTCTTACAACCCAGTAGTTCATGAGGGAGTGATTACAAGGG
AAGAGTTCGACCAGCTTAAAAGCAAATTCGACGCTCAGGTTGAAGCCTTAAAGGCAAGGTGCGAGGTCAAATGGAGCGCATTTGATGATGGCGACTTGGGAGAGTCACCA
TTCACCTCGGATATCTTTGAGGCTCTCATCCCCTCAAAGTTCAAGACTCCCACTATGAAACCGTATGACGGGTCTAAGGACCCAAAAGACTATGTTGAGGTCTTCGAAGG
CCTCATGGATTTTCCAGATCGCGCTTTCCGGCAGCGCGCGTTTGTGGTACAGAAGATTGTCGGCTAG
Protein sequenceShow/hide protein sequence
MVQPANSTNTADRRALAANDGHQREVGVEVAEGQIHEGLGTEPLRRSARITTPVLPPAHPKPSKANRGRGGASRRTTRGAAPAPTRENFDALQKEMEAMRTQMRTMEEMY
NEMVQAAGAGSRSEDRAARDEVCEQGDLHLDPVDEEHPGGDEDEEYIPCSHKNSNQQAESSYNPVVHEGVITREEFDQLKSKFDAQVEALKARCEVKWSAFDDGDLGESP
FTSDIFEALIPSKFKTPTMKPYDGSKDPKDYVEVFEGLMDFPDRAFRQRAFVVQKIVG