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Moc03g04200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr3:3106697..3107485
RNA-Seq ExpressionMoc03g04200
SyntenyMoc03g04200
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008456454.1 PREDICTED: uncharacterized protein LOC103496397 [Cucumis melo]5.3e-2144.36Show/hide
Query:  IDYDGPSSGVVPPTTNLDEDTDLTADNRFIELRTATDKG---------EHEIPSQTF---DMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHI
        +D D  S    PP  + +E   + A N + E RT TD           E+E+PS TF   DMD+V+ I EH+ ++ P+ I+N  LY G +C +K  +QH+
Subjt:  IDYDGPSSGVVPPTTNLDEDTDLTADNRFIELRTATDKG---------EHEIPSQTF---DMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHI

Query:  VKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGC
        VK FA+KSH PYEVVESTP+ W +RCKK   GC
Subjt:  VKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGC

XP_022143566.1 uncharacterized protein LOC111013435 [Momordica charantia]2.4e-3765.04Show/hide
Query:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFD---MDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHH
        VVPP T+LDED DL AD+RFIELRT TD        +GEH+IPS TF+    D VN  AEH+S+++P+  ENDMLYK FMCNDK TMQHIVK FA++SHH
Subjt:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFD---MDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHH

Query:  PYEVVESTPSIWAVRCKKWQDGC
        PY++VES PS W +RCKKWQDGC
Subjt:  PYEVVESTPSIWAVRCKKWQDGC

XP_022143642.1 uncharacterized protein LOC111013502 [Momordica charantia]2.6e-2896.72Show/hide
Query:  MLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN
        MLRPV +ENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN
Subjt:  MLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN

XP_022151714.1 uncharacterized protein LOC111019626 [Momordica charantia]6.7e-2489.47Show/hide
Query:  VAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN
        + +ENDMLYKGFMCNDK+TMQHIVKRFAVKSHHPY+VVE TPSIWAVRCKKWQDGCN
Subjt:  VAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN

XP_022156564.1 uncharacterized protein LOC111023439 [Momordica charantia]1.1e-3765.83Show/hide
Query:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFDMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYE
        VVPP TNLDED DLTADNRFI+L+T  D        +GEH+I SQTF+ D VN+IAEH+S+ +PVA +N+MLYKGF C+DK TMQHIVK F V +HH YE
Subjt:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFDMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYE

Query:  VVESTPSIWAVRCKKWQDGC
        V+ES PS W +RCKKWQDGC
Subjt:  VVESTPSIWAVRCKKWQDGC

TrEMBL top hitse value%identityAlignment
A0A1S3C4J7 uncharacterized protein LOC1034963972.6e-2144.36Show/hide
Query:  IDYDGPSSGVVPPTTNLDEDTDLTADNRFIELRTATDKG---------EHEIPSQTF---DMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHI
        +D D  S    PP  + +E   + A N + E RT TD           E+E+PS TF   DMD+V+ I EH+ ++ P+ I+N  LY G +C +K  +QH+
Subjt:  IDYDGPSSGVVPPTTNLDEDTDLTADNRFIELRTATDKG---------EHEIPSQTF---DMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHI

Query:  VKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGC
        VK FA+KSH PYEVVESTP+ W +RCKK   GC
Subjt:  VKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGC

A0A6J1CQN0 uncharacterized protein LOC1110134351.2e-3765.04Show/hide
Query:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFD---MDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHH
        VVPP T+LDED DL AD+RFIELRT TD        +GEH+IPS TF+    D VN  AEH+S+++P+  ENDMLYK FMCNDK TMQHIVK FA++SHH
Subjt:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFD---MDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHH

Query:  PYEVVESTPSIWAVRCKKWQDGC
        PY++VES PS W +RCKKWQDGC
Subjt:  PYEVVESTPSIWAVRCKKWQDGC

A0A6J1CRF1 uncharacterized protein LOC1110135021.3e-2896.72Show/hide
Query:  MLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN
        MLRPV +ENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN
Subjt:  MLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN

A0A6J1DDV8 uncharacterized protein LOC1110196263.3e-2489.47Show/hide
Query:  VAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN
        + +ENDMLYKGFMCNDK+TMQHIVKRFAVKSHHPY+VVE TPSIWAVRCKKWQDGCN
Subjt:  VAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN

A0A6J1DTV0 uncharacterized protein LOC1110234395.2e-3865.83Show/hide
Query:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFDMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYE
        VVPP TNLDED DLTADNRFI+L+T  D        +GEH+I SQTF+ D VN+IAEH+S+ +PVA +N+MLYKGF C+DK TMQHIVK F V +HH YE
Subjt:  VVPPTTNLDEDTDLTADNRFIELRTATD--------KGEHEIPSQTFDMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHIVKRFAVKSHHPYE

Query:  VVESTPSIWAVRCKKWQDGC
        V+ES PS W +RCKKWQDGC
Subjt:  VVESTPSIWAVRCKKWQDGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCTAAATGTTTGGCGATTGTACTGTATATGAATGGAGGTACTGTTGATGGTGTAAATGAAATTGATTACGATGGACCGTCAAGTGGAGTTGTACCTCCAACGAC
TAATTTAGATGAAGATACAGACTTAACTGCTGATAATAGATTTATAGAACTCAGGACAGCGACAGATAAGGGTGAACATGAGATCCCTTCTCAAACATTTGACATGGACA
GTGTTAACAGTATTGCAGAACACGAGTCCATGTTGCGACCAGTGGCAATTGAAAATGATATGTTATACAAGGGGTTCATGTGTAATGATAAAAGAACTATGCAACATATC
GTCAAACGTTTTGCTGTAAAGAGTCATCACCCTTACGAAGTTGTAGAGTCGACACCATCTATATGGGCAGTTAGATGTAAGAAGTGGCAAGATGGATGCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCTAAATGTTTGGCGATTGTACTGTATATGAATGGAGGTACTGTTGATGGTGTAAATGAAATTGATTACGATGGACCGTCAAGTGGAGTTGTACCTCCAACGAC
TAATTTAGATGAAGATACAGACTTAACTGCTGATAATAGATTTATAGAACTCAGGACAGCGACAGATAAGGGTGAACATGAGATCCCTTCTCAAACATTTGACATGGACA
GTGTTAACAGTATTGCAGAACACGAGTCCATGTTGCGACCAGTGGCAATTGAAAATGATATGTTATACAAGGGGTTCATGTGTAATGATAAAAGAACTATGCAACATATC
GTCAAACGTTTTGCTGTAAAGAGTCATCACCCTTACGAAGTTGTAGAGTCGACACCATCTATATGGGCAGTTAGATGTAAGAAGTGGCAAGATGGATGCAATTAG
Protein sequenceShow/hide protein sequence
MVAKCLAIVLYMNGGTVDGVNEIDYDGPSSGVVPPTTNLDEDTDLTADNRFIELRTATDKGEHEIPSQTFDMDSVNSIAEHESMLRPVAIENDMLYKGFMCNDKRTMQHI
VKRFAVKSHHPYEVVESTPSIWAVRCKKWQDGCN