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Moc03g04230 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04230
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRab5-interacting
Genome locationchr3:3127867..3129787
RNA-Seq ExpressionMoc03g04230
SyntenyMoc03g04230
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010742 - Rab5-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64888.1 hypothetical protein VITISV_021079, partial [Vitis vinifera]1.6e-1547.86Show/hide
Query:  KGSTRRCLALDAPIGCACMWAAMGFHTSNWRHMVHLLHPYNRGYGQPPDTITDTTELVPEWGKPGYV--SAREGFLVILTTMVYGYYAIILKVDEEEFGG
        +GS  R  ALD+    + +W  MGFHT  W HM HL     RG  Q      D         K  ++  +    FL+I + ++YGYYAIILK+DEE+FGG
Subjt:  KGSTRRCLALDAPIGCACMWAAMGFHTSNWRHMVHLLHPYNRGYGQPPDTITDTTELVPEWGKPGYV--SAREGFLVILTTMVYGYYAIILKVDEEEFGG

Query:  HGLLLQEGLFASITLFL
        HG LLQEGLFASITLFL
Subjt:  HGLLLQEGLFASITLFL

KAG6605452.1 hypothetical protein SDJN03_02769, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1750.88Show/hide
Query:  GSTRRCLALDAPIGCACMWAAMGFHTSNWRHMVHLLHPYNRGYGQPPDTITDTTELVPEWGKPGYVSAREGFLVILTTMVYGYYAIILKVDEEEFGGHGL
        GS RRC ALD+     C  AA+G HT  WRHMV  +   +  +     +IT    +         ++    FL I T++VYGYYA+ILKVDEEEFGGHG 
Subjt:  GSTRRCLALDAPIGCACMWAAMGFHTSNWRHMVHLLHPYNRGYGQPPDTITDTTELVPEWGKPGYVSAREGFLVILTTMVYGYYAIILKVDEEEFGGHGL

Query:  LLQEGLFASITLFL
        LLQEGLFASITLFL
Subjt:  LLQEGLFASITLFL

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]2.8e-1293.02Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL
        FLVI TTMVYGYYA+ILKVDEEEFGGHG+LLQEGLFASITLFL
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL

XP_038895583.1 respirasome Complex Assembly Factor 1-like isoform X1 [Benincasa hispida]2.8e-1293.02Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL
        FLVI TTMVYGYYA+ILKVDEEEFGGHG+LLQEGLFASITLFL
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]2.8e-1293.02Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL
        FLVI TTMVYGYYA+ILKVDEEEFGGHG+LLQEGLFASITLFL
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL

TrEMBL top hitse value%identityAlignment
A0A0A0LY22 Uncharacterized protein1.7e-1290.7Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL
        FLVI TTM+YGYYA+ILKVDEEEFGGHG+LLQEGLFASITLFL
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL

A0A5A7VQ84 Rab5-interacting2.3e-1288.37Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL
        FLVI TTM+YGYYA+ILKVDEEEFGGHG+LLQEGLFAS+TLFL
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL

A0A6J1G9S8 uncharacterized protein C20orf24 homolog1.3e-1293.02Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL
        FLVI TTMVYGYYA+ILKVDEEEFGGHG+LLQEGLFASITLFL
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL

A0A6J1KGG2 uncharacterized protein C20orf24 homolog1.3e-1293.02Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL
        FLVI TTMVYGYYA+ILKVDEEEFGGHG+LLQEGLFASITLFL
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFL

A5ATD3 Uncharacterized protein (Fragment)7.6e-1647.86Show/hide
Query:  KGSTRRCLALDAPIGCACMWAAMGFHTSNWRHMVHLLHPYNRGYGQPPDTITDTTELVPEWGKPGYV--SAREGFLVILTTMVYGYYAIILKVDEEEFGG
        +GS  R  ALD+    + +W  MGFHT  W HM HL     RG  Q      D         K  ++  +    FL+I + ++YGYYAIILK+DEE+FGG
Subjt:  KGSTRRCLALDAPIGCACMWAAMGFHTSNWRHMVHLLHPYNRGYGQPPDTITDTTELVPEWGKPGYV--SAREGFLVILTTMVYGYYAIILKVDEEEFGG

Query:  HGLLLQEGLFASITLFL
        HG LLQEGLFASITLFL
Subjt:  HGLLLQEGLFASITLFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29020.1 Rab5-interacting family protein6.6e-1265.96Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFLFTAW
        FL I + +VYGYYA++LK+DEE+FGGH  LLQ+GLFAS++LFL  AW
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFLFTAW

AT5G59410.1 Rab5-interacting family protein7.7e-1374.47Show/hide
Query:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFLFTAW
        FL I + +VYGYYA+ILKVDEE+FGGH  LLQEGLFAS+TLFL  AW
Subjt:  FLVILTTMVYGYYAIILKVDEEEFGGHGLLLQEGLFASITLFLFTAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCACATGTCGAAGGCTGCAATGCCATCGAAGCAAGAAAAGGATCAACTAGGAGATGTCTTGCATTGGATGCGCCAATCGGTTGCGCTTGTATGTGGGCTGC
TATGGGGTTCCATACCTCTAATTGGCGGCATATGGTTCATCTTTTGCATCCCTATAATCGGGGGTACGGACAGCCTCCTGACACTATAACCGACACCACAGAACTCGTCC
CTGAATGGGGAAAACCCGGTTACGTGTCCGCCAGGGAGGGATTCTTGGTGATATTGACCACGATGGTATACGGATACTACGCAATTATTTTGAAAGTCGACGAAGAAGAA
TTCGGGGGTCACGGACTTCTCCTTCAGGAAGGGCTTTTTGCTTCCATAACTCTGTTTCTGTTTACAGCTTGGGACATTTCTGATAATGGTTTCGTCATCGTTCTCGACAT
CGATGTCGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCACATGTCGAAGGCTGCAATGCCATCGAAGCAAGAAAAGGATCAACTAGGAGATGTCTTGCATTGGATGCGCCAATCGGTTGCGCTTGTATGTGGGCTGC
TATGGGGTTCCATACCTCTAATTGGCGGCATATGGTTCATCTTTTGCATCCCTATAATCGGGGGTACGGACAGCCTCCTGACACTATAACCGACACCACAGAACTCGTCC
CTGAATGGGGAAAACCCGGTTACGTGTCCGCCAGGGAGGGATTCTTGGTGATATTGACCACGATGGTATACGGATACTACGCAATTATTTTGAAAGTCGACGAAGAAGAA
TTCGGGGGTCACGGACTTCTCCTTCAGGAAGGGCTTTTTGCTTCCATAACTCTGTTTCTGTTTACAGCTTGGGACATTTCTGATAATGGTTTCGTCATCGTTCTCGACAT
CGATGTCGGGTGA
Protein sequenceShow/hide protein sequence
MAMAHVEGCNAIEARKGSTRRCLALDAPIGCACMWAAMGFHTSNWRHMVHLLHPYNRGYGQPPDTITDTTELVPEWGKPGYVSAREGFLVILTTMVYGYYAIILKVDEEE
FGGHGLLLQEGLFASITLFLFTAWDISDNGFVIVLDIDVG