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Moc03g04320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr3:3216716..3217102
RNA-Seq ExpressionMoc03g04320
SyntenyMoc03g04320
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]7.1e-0936.22Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN
        MFSIAL  P +  L V V +M++  ++L V  + +   + +D++PE   PP+ + +E   + A N + + RT TDDEF+E+D +  E+++ S TF D+D 
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN

Query:  DMVNSTAEHDSIFQLVATENDILYKGV
        + V++  EHD I   + T+N  LY G+
Subjt:  DMVNSTAEHDSIFQLVATENDILYKGV

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-0836.22Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN
        MFSIAL  P +  L V V +M++  ++L V  + +   + +D++PE   PP+ + +E   + A N + + RT TDDEF+E+D +  E+++ S TF D+D 
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN

Query:  DMVNSTAEHDSIFQLVATENDILYKGV
        + V+   EHD I   + T+N  LY G+
Subjt:  DMVNSTAEHDSIFQLVATENDILYKGV

XP_022143566.1 uncharacterized protein LOC111013435 [Momordica charantia]1.3e-4275.81Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND
        MF+IALSCP+L EL VNVRNM+NV LD E P+QCL HSQCLDL+PELVVPP+T+LDEDMDL AD+ FI+LRT TDDEFDELDLE EHDI S TFNDI ND
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND

Query:  MVNSTAEHDSIFQLVATENDILYK
        MVN  AEHDSI Q +  END+LYK
Subjt:  MVNSTAEHDSIFQLVATENDILYK

XP_022152034.1 disease resistance protein RGA2-like [Momordica charantia]1.1e-1448.28Show/hide
Query:  LAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDNDMVNSTAEHD
        + EL V VRN++N     + P+QCLN     DL+PE +V    N+DE++DL  +N+ ++LRT TDDEFD+LD E  E++I S  FND+  +++NST EHD
Subjt:  LAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDNDMVNSTAEHD

Query:  SIFQLVATENDILYKG
         I + VA E+D+LYKG
Subjt:  SIFQLVATENDILYKG

XP_022156564.1 uncharacterized protein LOC111023439 [Momordica charantia]2.9e-4276.8Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND
        MFSIAL CP+LAEL VNVRNMMNV L+LEVP++CL+HSQCL  + ELVVPPMTNLDEDMDLTADN FIDL+T  DDEFDELDLE EHDI+SQTF    ND
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND

Query:  MVNSTAEHDSIFQLVATENDILYKG
        MVN+ AEHDSIFQ VA +N++LYKG
Subjt:  MVNSTAEHDSIFQLVATENDILYKG

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein3.4e-0936.22Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN
        MFSIAL  P +  L V V +M++  ++L V  + +   + +D++PE   PP+ + +E   + A N + + RT TDDEF+E+D +  E+++ S TF D+D 
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN

Query:  DMVNSTAEHDSIFQLVATENDILYKGV
        + V++  EHD I   + T+N  LY G+
Subjt:  DMVNSTAEHDSIFQLVATENDILYKGV

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein7.7e-0936.22Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN
        MFSIAL  P +  L V V +M++  ++L V  + +   + +D++PE   PP+ + +E   + A N + + RT TDDEF+E+D +  E+++ S TF D+D 
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDN

Query:  DMVNSTAEHDSIFQLVATENDILYKGV
        + V+   EHD I   + T+N  LY G+
Subjt:  DMVNSTAEHDSIFQLVATENDILYKGV

A0A6J1CQN0 uncharacterized protein LOC1110134356.2e-4375.81Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND
        MF+IALSCP+L EL VNVRNM+NV LD E P+QCL HSQCLDL+PELVVPP+T+LDEDMDL AD+ FI+LRT TDDEFDELDLE EHDI S TFNDI ND
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND

Query:  MVNSTAEHDSIFQLVATENDILYK
        MVN  AEHDSI Q +  END+LYK
Subjt:  MVNSTAEHDSIFQLVATENDILYK

A0A6J1DEU3 disease resistance protein RGA2-like5.5e-1548.28Show/hide
Query:  LAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDNDMVNSTAEHD
        + EL V VRN++N     + P+QCLN     DL+PE +V    N+DE++DL  +N+ ++LRT TDDEFD+LD E  E++I S  FND+  +++NST EHD
Subjt:  LAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLE-VEHDIHSQTFNDIDNDMVNSTAEHD

Query:  SIFQLVATENDILYKG
         I + VA E+D+LYKG
Subjt:  SIFQLVATENDILYKG

A0A6J1DTV0 uncharacterized protein LOC1110234391.4e-4276.8Show/hide
Query:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND
        MFSIAL CP+LAEL VNVRNMMNV L+LEVP++CL+HSQCL  + ELVVPPMTNLDEDMDLTADN FIDL+T  DDEFDELDLE EHDI+SQTF    ND
Subjt:  MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDND

Query:  MVNSTAEHDSIFQLVATENDILYKG
        MVN+ AEHDSIFQ VA +N++LYKG
Subjt:  MVNSTAEHDSIFQLVATENDILYKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCAATTGCACTGTCATGTCCAAAATTAGCGGAATTGTCTGTGAATGTTAGAAATATGATGAATGTCCCATTGGACCTCGAGGTACCCAACCAATGTCTTAACCA
TAGTCAATGTCTTGATCTTAAACCTGAGTTAGTTGTGCCTCCAATGACTAATTTAGATGAAGATATGGATTTAACTGCTGACAATACGTTTATAGACCTCAGGACAGCAA
CAGATGATGAGTTTGATGAATTGGACCTCGAGGTTGAACACGATATCCATTCACAAACATTTAATGACATAGACAATGACATGGTTAATAGTACTGCAGAACACGATTCT
ATTTTTCAACTTGTGGCTACTGAAAATGATATACTGTACAAGGGGGTTCAAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCAATTGCACTGTCATGTCCAAAATTAGCGGAATTGTCTGTGAATGTTAGAAATATGATGAATGTCCCATTGGACCTCGAGGTACCCAACCAATGTCTTAACCA
TAGTCAATGTCTTGATCTTAAACCTGAGTTAGTTGTGCCTCCAATGACTAATTTAGATGAAGATATGGATTTAACTGCTGACAATACGTTTATAGACCTCAGGACAGCAA
CAGATGATGAGTTTGATGAATTGGACCTCGAGGTTGAACACGATATCCATTCACAAACATTTAATGACATAGACAATGACATGGTTAATAGTACTGCAGAACACGATTCT
ATTTTTCAACTTGTGGCTACTGAAAATGATATACTGTACAAGGGGGTTCAAGTGTAG
Protein sequenceShow/hide protein sequence
MFSIALSCPKLAELSVNVRNMMNVPLDLEVPNQCLNHSQCLDLKPELVVPPMTNLDEDMDLTADNTFIDLRTATDDEFDELDLEVEHDIHSQTFNDIDNDMVNSTAEHDS
IFQLVATENDILYKGVQV