; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04430 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04430
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr3:3320048..3320798
RNA-Seq ExpressionMoc03g04430
SyntenyMoc03g04430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]3.9e-0928.74Show/hide
Query:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA
        VR  +G+G  C VW D WL GG I    G+ ++YDAA+               W W +V+              P L+V   D  +W+P     FS++SA
Subjt:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA

Query:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL
        W             G+LW                +  V   + SSHRI +   EL+W+ H   GK   R++WR+
Subjt:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL

KAA0037110.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.6e-1031.97Show/hide
Query:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA
        VR  +GDG  C VW D WL  G I    G  ++YDAA+               W W +V+              P L+V   D  +W+P     F ++SA
Subjt:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA

Query:  WGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL
        W         V   + SSHRI +   EL+W+CH   GK   R++WR+
Subjt:  WGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.0e-0929.31Show/hide
Query:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA
        VR  +G+G  C VW D WL GG I    G+ ++YDAA+               W W +V+              P LNV   D  +W+P     FS++SA
Subjt:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA

Query:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL
        W             G+LW                +  V   + SSHRI +   EL+W+ H   GK   R++WR+
Subjt:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL

XP_022158199.1 uncharacterized protein LOC111024737 [Momordica charantia]2.7e-1038.94Show/hide
Query:  LNVGRVDVPIWIPVPSSVFSVSSAWGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL------------------GDVGQSPFVLL
        +N+G+   P       SV    +AW ++           CSSHR+SY STEL W+CH+SAG  + R VWRL                  G  G+   VLL
Subjt:  LNVGRVDVPIWIPVPSSVFSVSSAWGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL------------------GDVGQSPFVLL

Query:  RALKAEVYYRCTT
        R +KAEVY+RCTT
Subjt:  RALKAEVYYRCTT

XP_022158861.1 uncharacterized protein LOC111025324 [Momordica charantia]1.2e-1830.65Show/hide
Query:  TIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAANWSWAKVAYF---------PFLN----------------VGRVDVPIWIPVPSSVFSVSSAWGVLW
        + GDG+ CFVWHD WL GGPI+   GD +IYD A+ S AKV  F         P ++                VG+ D  +W P  S +FSVSS WG+L 
Subjt:  TIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAANWSWAKVAYF---------PFLN----------------VGRVDVPIWIPVPSSVFSVSSAWGVLW

Query:  PTRPSVPLF------------------------------------------LC----------------------------SSHRISYSSTELAWVCHIS
        P RP V  F                                           C                            SSHR+SY STEL W+CH++
Subjt:  PTRPSVPLF------------------------------------------LC----------------------------SSHRISYSSTELAWVCHIS

Query:  AGKFACRRVWRLG------------------DVGQSPFVLLRALKAEV
         G  + R VWRL                     G+S  VLLR +KAEV
Subjt:  AGKFACRRVWRLG------------------DVGQSPFVLLRALKAEV

TrEMBL top hitse value%identityAlignment
A0A5A7T172 Zf-RVT domain-containing protein7.6e-1131.97Show/hide
Query:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA
        VR  +GDG  C VW D WL  G I    G  ++YDAA+               W W +V+              P L+V   D  +W+P     F ++SA
Subjt:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA

Query:  WGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL
        W         V   + SSHRI +   EL+W+CH   GK   R++WR+
Subjt:  WGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL

A0A5A7T440 Zf-RVT domain-containing protein1.9e-0928.74Show/hide
Query:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA
        VR  +G+G  C VW D WL GG I    G+ ++YDAA+               W W +V+              P L+V   D  +W+P     FS++SA
Subjt:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA

Query:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL
        W             G+LW                +  V   + SSHRI +   EL+W+ H   GK   R++WR+
Subjt:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL

A0A5D3BDZ6 Zf-RVT domain-containing protein4.9e-1029.31Show/hide
Query:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA
        VR  +G+G  C VW D WL GG I    G+ ++YDAA+               W W +V+              P LNV   D  +W+P     FS++SA
Subjt:  VRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAAN---------------WSWAKVA------------YFPFLNVGRVDVPIWIPVPSSVFSVSSA

Query:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL
        W             G+LW                +  V   + SSHRI +   EL+W+ H   GK   R++WR+
Subjt:  W-------------GVLW--------------PTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL

A0A6J1DYP6 uncharacterized protein LOC1110247371.3e-1038.94Show/hide
Query:  LNVGRVDVPIWIPVPSSVFSVSSAWGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL------------------GDVGQSPFVLL
        +N+G+   P       SV    +AW ++           CSSHR+SY STEL W+CH+SAG  + R VWRL                  G  G+   VLL
Subjt:  LNVGRVDVPIWIPVPSSVFSVSSAWGVLWPTRPSVPLFLCSSHRISYSSTELAWVCHISAGKFACRRVWRL------------------GDVGQSPFVLL

Query:  RALKAEVYYRCTT
        R +KAEVY+RCTT
Subjt:  RALKAEVYYRCTT

A0A6J1E271 uncharacterized protein LOC1110253245.8e-1930.65Show/hide
Query:  TIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAANWSWAKVAYF---------PFLN----------------VGRVDVPIWIPVPSSVFSVSSAWGVLW
        + GDG+ CFVWHD WL GGPI+   GD +IYD A+ S AKV  F         P ++                VG+ D  +W P  S +FSVSS WG+L 
Subjt:  TIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAANWSWAKVAYF---------PFLN----------------VGRVDVPIWIPVPSSVFSVSSAWGVLW

Query:  PTRPSVPLF------------------------------------------LC----------------------------SSHRISYSSTELAWVCHIS
        P RP V  F                                           C                            SSHR+SY STEL W+CH++
Subjt:  PTRPSVPLF------------------------------------------LC----------------------------SSHRISYSSTELAWVCHIS

Query:  AGKFACRRVWRLG------------------DVGQSPFVLLRALKAEV
         G  + R VWRL                     G+S  VLLR +KAEV
Subjt:  AGKFACRRVWRLG------------------DVGQSPFVLLRALKAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTGTTCGGGATGCTTTTTGGCCTCTGGTTCGGTTTACTATTGGAGATGGTCAGTGTTGTTTTGTGTGGCATGATGCTTGGCTTCCGGGGGGTCCGATTTATCT
GTGGTTTGGTGATCATATTATCTATGATGCTGCAAACTGGTCCTGGGCAAAGGTTGCTTATTTTCCATTTCTTAATGTTGGGAGGGTTGATGTGCCCATTTGGATTCCGG
TGCCGTCGAGTGTCTTCTCGGTGTCGAGTGCGTGGGGTGTGTTGTGGCCAACTCGACCTTCTGTTCCTTTGTTTCTTTGTTCTTCTCATCGGATTTCATATTCGTCTACT
GAGCTTGCTTGGGTTTGTCACATTAGTGCCGGGAAGTTTGCTTGTCGTCGTGTGTGGCGCTTGGGTGATGTTGGCCAATCGCCTTTTGTCCTCTTGCGTGCTTTGAAAGC
TGAGGTCTATTATCGTTGTACTACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTGTTCGGGATGCTTTTTGGCCTCTGGTTCGGTTTACTATTGGAGATGGTCAGTGTTGTTTTGTGTGGCATGATGCTTGGCTTCCGGGGGGTCCGATTTATCT
GTGGTTTGGTGATCATATTATCTATGATGCTGCAAACTGGTCCTGGGCAAAGGTTGCTTATTTTCCATTTCTTAATGTTGGGAGGGTTGATGTGCCCATTTGGATTCCGG
TGCCGTCGAGTGTCTTCTCGGTGTCGAGTGCGTGGGGTGTGTTGTGGCCAACTCGACCTTCTGTTCCTTTGTTTCTTTGTTCTTCTCATCGGATTTCATATTCGTCTACT
GAGCTTGCTTGGGTTTGTCACATTAGTGCCGGGAAGTTTGCTTGTCGTCGTGTGTGGCGCTTGGGTGATGTTGGCCAATCGCCTTTTGTCCTCTTGCGTGCTTTGAAAGC
TGAGGTCTATTATCGTTGTACTACCTGA
Protein sequenceShow/hide protein sequence
MPSVRDAFWPLVRFTIGDGQCCFVWHDAWLPGGPIYLWFGDHIIYDAANWSWAKVAYFPFLNVGRVDVPIWIPVPSSVFSVSSAWGVLWPTRPSVPLFLCSSHRISYSST
ELAWVCHISAGKFACRRVWRLGDVGQSPFVLLRALKAEVYYRCTT