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Moc03g04620 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04620
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr3:3458260..3460267
RNA-Seq ExpressionMoc03g04620
SyntenyMoc03g04620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141216.1 uncharacterized protein LOC111011669 [Momordica charantia]1.6e-1148.39Show/hide
Query:  MEFEPSINRAFSFVAQEAQQR-----AISLPQPLISSAALMARSFASNSSSSNFQEKKKER-RCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSP
        ME E +INRAFS VAQE +QR     A S     I +A L   S +SN++ ++ Q ++KER  CTHC L GHT DRCYKLHGYP  +R T  S N S   
Subjt:  MEFEPSINRAFSFVAQEAQQR-----AISLPQPLISSAALMARSFASNSSSSNFQEKKKER-RCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSP

Query:  PSKTVDTSSKSSSV-SSTVPDSLT
        P    + S+ +SSV SS+  DSL+
Subjt:  PSKTVDTSSKSSSV-SSTVPDSLT

XP_022148562.1 uncharacterized protein LOC111017196 [Momordica charantia]8.5e-1343.51Show/hide
Query:  PSINRAFSFVAQEAQQRAISLPQPLISSAA----------------LMARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRN
        P+IN AF  +AQE QQR IS      SSA+                L   S +SN S SN  ++K++  CTHC L  HT DRCYKLHGYP  YR   +R 
Subjt:  PSINRAFSFVAQEAQQRAISLPQPLISSAA----------------LMARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRN

Query:  FSPSP-PSKTVDTSSKSSSVSSTVPDSLTGI
          PSP P+K+ D +SK+   ++ +PDSL+ I
Subjt:  FSPSP-PSKTVDTSSKSSSVSSTVPDSLTGI

XP_022150305.1 uncharacterized protein LOC111018505 [Momordica charantia]2.7e-1155.7Show/hide
Query:  FASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRNFSPSPPSKTVDTSSKSSSVSSTVPDSLTGI
        + S S+SS+  +KK +  CTHCGL GHT DRCYKLHGYP  YRT GSRN S    S T  +    SS SS +PDSLT +
Subjt:  FASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRNFSPSPPSKTVDTSSKSSSVSSTVPDSLTGI

XP_022154919.1 uncharacterized protein LOC111022065 [Momordica charantia]2.5e-1245.08Show/hide
Query:  MEFEPSINRAFSFVAQEAQQRAISLP---QPLISSAALMARSFAS--NSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSPP
        ME  P+INRAF+ VAQE QQR+ISLP    P  S+    + S  S  NSSS++  ++K +  CTHCG++GHT D+CYKLH YP  YR ++     S +  
Subjt:  MEFEPSINRAFSFVAQEAQQRAISLP---QPLISSAALMARSFAS--NSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSPP

Query:  SKTVDTSSKS-SSVSSTVPDSL
        S++ +  SKS S+  S + +SL
Subjt:  SKTVDTSSKS-SSVSSTVPDSL

XP_022158788.1 uncharacterized protein LOC111025254 [Momordica charantia]1.1e-1248.39Show/hide
Query:  MEFEPSINRAFSFVAQEAQQRAISLPQPLISSAALM-------ARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSR-NFSPS
        ME EPSINR  S VAQEAQQRAI+   P   +  L+       +RS  S +SS +   KK +  CTHCG+ GHT+D+CY+LHGYP  +R  G + +FS S
Subjt:  MEFEPSINRAFSFVAQEAQQRAISLPQPLISSAALM-------ARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSR-NFSPS

Query:  PPSKTVDTSSKS-SSVSSTVPDSL
          S++   S KS SS+SS   DSL
Subjt:  PPSKTVDTSSKS-SSVSSTVPDSL

TrEMBL top hitse value%identityAlignment
A0A2N9I811 Integrase catalytic domain-containing protein5.9e-1246.81Show/hide
Query:  MEFEPSINRAFSFVAQEAQQRAI-----SLPQPLISSAALMARSFASNSSSSNFQEKKKER-RCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRN
        M+  P IN+ FS + QE +QR+I     SL  P + S ALM +S    +  S    +KKER +CTHCGL GHT D+CYKLHG+P  Y+T G  +
Subjt:  MEFEPSINRAFSFVAQEAQQRAI-----SLPQPLISSAALMARSFASNSSSSNFQEKKKER-RCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRN

A0A6J1CIG1 uncharacterized protein LOC1110116697.7e-1248.39Show/hide
Query:  MEFEPSINRAFSFVAQEAQQR-----AISLPQPLISSAALMARSFASNSSSSNFQEKKKER-RCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSP
        ME E +INRAFS VAQE +QR     A S     I +A L   S +SN++ ++ Q ++KER  CTHC L GHT DRCYKLHGYP  +R T  S N S   
Subjt:  MEFEPSINRAFSFVAQEAQQR-----AISLPQPLISSAALMARSFASNSSSSNFQEKKKER-RCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSP

Query:  PSKTVDTSSKSSSV-SSTVPDSLT
        P    + S+ +SSV SS+  DSL+
Subjt:  PSKTVDTSSKSSSV-SSTVPDSLT

A0A6J1D5E3 uncharacterized protein LOC1110171964.1e-1343.51Show/hide
Query:  PSINRAFSFVAQEAQQRAISLPQPLISSAA----------------LMARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRN
        P+IN AF  +AQE QQR IS      SSA+                L   S +SN S SN  ++K++  CTHC L  HT DRCYKLHGYP  YR   +R 
Subjt:  PSINRAFSFVAQEAQQRAISLPQPLISSAA----------------LMARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRN

Query:  FSPSP-PSKTVDTSSKSSSVSSTVPDSLTGI
          PSP P+K+ D +SK+   ++ +PDSL+ I
Subjt:  FSPSP-PSKTVDTSSKSSSVSSTVPDSLTGI

A0A6J1DNP7 uncharacterized protein LOC1110220651.2e-1245.08Show/hide
Query:  MEFEPSINRAFSFVAQEAQQRAISLP---QPLISSAALMARSFAS--NSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSPP
        ME  P+INRAF+ VAQE QQR+ISLP    P  S+    + S  S  NSSS++  ++K +  CTHCG++GHT D+CYKLH YP  YR ++     S +  
Subjt:  MEFEPSINRAFSFVAQEAQQRAISLP---QPLISSAALMARSFAS--NSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYR-TIGSRNFSPSPP

Query:  SKTVDTSSKS-SSVSSTVPDSL
        S++ +  SKS S+  S + +SL
Subjt:  SKTVDTSSKS-SSVSSTVPDSL

A0A6J1DX32 uncharacterized protein LOC1110252545.4e-1348.39Show/hide
Query:  MEFEPSINRAFSFVAQEAQQRAISLPQPLISSAALM-------ARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSR-NFSPS
        ME EPSINR  S VAQEAQQRAI+   P   +  L+       +RS  S +SS +   KK +  CTHCG+ GHT+D+CY+LHGYP  +R  G + +FS S
Subjt:  MEFEPSINRAFSFVAQEAQQRAISLPQPLISSAALM-------ARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSR-NFSPS

Query:  PPSKTVDTSSKS-SSVSSTVPDSL
          S++   S KS SS+SS   DSL
Subjt:  PPSKTVDTSSKS-SSVSSTVPDSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGAGCCCTCAATTAATCGAGCATTCTCGTTTGTTGCCCAAGAAGCTCAACAACGTGCGATTTCCTTGCCGCAGCCTCTAATTTCTTCAGCTGCACTTATGGC
GCGTTCTTTTGCTTCTAATTCTTCTTCTTCCAACTTTCAGGAAAAGAAGAAGGAACGCCGCTGCACTCATTGTGGACTTCATGGCCACACGTCGGATCGTTGTTACAAAC
TTCATGGGTATCCTCTTTGCTATCGAACTATTGGAAGTCGCAATTTCTCCCCATCGCCTCCTTCCAAAACAGTCGATACTTCTTCCAAGTCTTCATCTGTTTCTTCAACT
GTTCCTGATTCTTTGACTGGTATCTGCTACTTCCCTCCTTCAATTCCTGTTGAAACTTGGTCATCTTTGAAGACGATTGGCAGGCGTAATCTGTGGCATGGTCTCTACAT
TCTTGACATGGCTCGTTCATCCCTTGTTGCTTCCCGTAATGTTTGCAATGTTAAGTTGGTTTGGGTGAAGAACCACTACCTGTTGATCACAATGATTTTCCCCACTGATG
TAACTACGTCACCTAAGGAAATATTGGCTGCGTCCTCTCCTAATGCATCTATTTTGGCCCATGATGATTCTATACATATTTCTGATCCACCTACTAATATTCATTCGACC
TCTACTGATACATCAGTTGGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTGAGCCCTCAATTAATCGAGCATTCTCGTTTGTTGCCCAAGAAGCTCAACAACGTGCGATTTCCTTGCCGCAGCCTCTAATTTCTTCAGCTGCACTTATGGC
GCGTTCTTTTGCTTCTAATTCTTCTTCTTCCAACTTTCAGGAAAAGAAGAAGGAACGCCGCTGCACTCATTGTGGACTTCATGGCCACACGTCGGATCGTTGTTACAAAC
TTCATGGGTATCCTCTTTGCTATCGAACTATTGGAAGTCGCAATTTCTCCCCATCGCCTCCTTCCAAAACAGTCGATACTTCTTCCAAGTCTTCATCTGTTTCTTCAACT
GTTCCTGATTCTTTGACTGGTATCTGCTACTTCCCTCCTTCAATTCCTGTTGAAACTTGGTCATCTTTGAAGACGATTGGCAGGCGTAATCTGTGGCATGGTCTCTACAT
TCTTGACATGGCTCGTTCATCCCTTGTTGCTTCCCGTAATGTTTGCAATGTTAAGTTGGTTTGGGTGAAGAACCACTACCTGTTGATCACAATGATTTTCCCCACTGATG
TAACTACGTCACCTAAGGAAATATTGGCTGCGTCCTCTCCTAATGCATCTATTTTGGCCCATGATGATTCTATACATATTTCTGATCCACCTACTAATATTCATTCGACC
TCTACTGATACATCAGTTGGTGTTTGA
Protein sequenceShow/hide protein sequence
MEFEPSINRAFSFVAQEAQQRAISLPQPLISSAALMARSFASNSSSSNFQEKKKERRCTHCGLHGHTSDRCYKLHGYPLCYRTIGSRNFSPSPPSKTVDTSSKSSSVSST
VPDSLTGICYFPPSIPVETWSSLKTIGRRNLWHGLYILDMARSSLVASRNVCNVKLVWVKNHYLLITMIFPTDVTTSPKEILAASSPNASILAHDDSIHISDPPTNIHST
STDTSVGV