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Moc03g04680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag-pro-like protein
Genome locationchr3:3524887..3525540
RNA-Seq ExpressionMoc03g04680
SyntenyMoc03g04680
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]4.2e-5476.43Show/hide
Query:  MPQYTTYNSLCDVSIGQYLHPFVKGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSEL
        MPQYTTYN L DV +GQYLHPFVKGAQQIP NIIFREPEQMMSP  VLN+  L AKTDPV Q+  SNEKF+VL+ERLRA+E T+VFGN DASQLC VS L
Subjt:  MPQYTTYNSLCDVSIGQYLHPFVKGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSEL

Query:  VLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI
        V+PPK KVPEFEKY+GSSCP N+  MY RKM AYVQNDK+
Subjt:  VLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]2.2e-7473.4Show/hide
Query:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN
        +DQK EQEK RKDIEELREKLD ILLALEKGK   +P TSSNP H+ QE PPYP G+ PPLR VAEGFM Q TTYN L D+ +GQY  PFVKG QQIP N
Subjt:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN

Query:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME
        IIFREPEQMM P  VLN+ GL  KTDPV QS  SNEKF+VLEERL AVEGT+VFGN DASQLCL+S LV+  KFKVPEFEKYDGSSCP N+ IMY + M 
Subjt:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME

Query:  AYV
        AYV
Subjt:  AYV

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]7.4e-6764.06Show/hide
Query:  MKEDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGH-------GPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFV
        M++D+K EQEKTRKDIEELREKLDAILLALEKGK     A +SNP HE   TP +PPG        GP  RP+ EGFM QYTTYN L D+  GQ+  P V
Subjt:  MKEDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGH-------GPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFV

Query:  KGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNY
        +G  Q P  IIF+EPEQ+++P  VLN+ G  A  DP RQ   S+EK +VLEERLRAVEGT+VFGN DASQLCL S LV+PPKFK+PEFEKY+GSSCP N+
Subjt:  KGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNY

Query:  FIMYYRKMEAYVQNDKI
         IMY RKM AY+QNDK+
Subjt:  FIMYYRKMEAYVQNDKI

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]1.0e-8780.29Show/hide
Query:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN
        EDQK EQEKTRKDIEELREKLD I L LEKGKA  +PATSSNP HE QETPPYPPG+GPPLRPVAEGFMPQYTTYN L DV IGQY H FVKGAQQIP N
Subjt:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN

Query:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME
        IIFREPEQMMSP  V N+ G PAKTDPV Q+  S EK +VLEERLRA+EGT+VFGN DASQLCLVS LV+PPKFKVPEFEKYDGSSCP N+ IMY RKM 
Subjt:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME

Query:  AYVQNDKI
        AYVQN K+
Subjt:  AYVQNDKI

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]3.0e-3679Show/hide
Query:  MMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI
        MMSP  VLN+ GLPAKTD V Q+  SNEKF+VLEERLRA+EGT VFGN DASQLCLVS LV+PPKFKVPEFEKYDGSSCP N+ IMY RKM AYVQNDK+
Subjt:  MMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI

TrEMBL top hitse value%identityAlignment
A0A6J1D099 Ribonuclease H2.0e-5476.43Show/hide
Query:  MPQYTTYNSLCDVSIGQYLHPFVKGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSEL
        MPQYTTYN L DV +GQYLHPFVKGAQQIP NIIFREPEQMMSP  VLN+  L AKTDPV Q+  SNEKF+VL+ERLRA+E T+VFGN DASQLC VS L
Subjt:  MPQYTTYNSLCDVSIGQYLHPFVKGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSEL

Query:  VLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI
        V+PPK KVPEFEKY+GSSCP N+  MY RKM AYVQNDK+
Subjt:  VLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI

A0A6J1D7T3 uncharacterized protein LOC1110178121.0e-7473.4Show/hide
Query:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN
        +DQK EQEK RKDIEELREKLD ILLALEKGK   +P TSSNP H+ QE PPYP G+ PPLR VAEGFM Q TTYN L D+ +GQY  PFVKG QQIP N
Subjt:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN

Query:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME
        IIFREPEQMM P  VLN+ GL  KTDPV QS  SNEKF+VLEERL AVEGT+VFGN DASQLCL+S LV+  KFKVPEFEKYDGSSCP N+ IMY + M 
Subjt:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME

Query:  AYV
        AYV
Subjt:  AYV

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222312.1e-6764.52Show/hide
Query:  MKEDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGH-------GPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFV
        M++D+K EQEKTRKDIEELREKLDAILLALEKGK     A +SNP HE   TP +PPG        GP  RP+ EGFM QYTTYN L D+  GQ+  P V
Subjt:  MKEDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGH-------GPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFV

Query:  KGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNY
        +G  Q P  IIF+EPEQ+++P  VLN+ G  A  DP RQ   S+EK +VLEERLRAVEGT+VFGN DASQLCL S LV+PPKFK+PEFEKYDGSSCP N+
Subjt:  KGAQQIPINIIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNY

Query:  FIMYYRKMEAYVQNDKI
         IMY RKM AY+QNDK+
Subjt:  FIMYYRKMEAYVQNDKI

A0A6J1DZ90 Ribonuclease H4.8e-8880.29Show/hide
Query:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN
        EDQK EQEKTRKDIEELREKLD I L LEKGKA  +PATSSNP HE QETPPYPPG+GPPLRPVAEGFMPQYTTYN L DV IGQY H FVKGAQQIP N
Subjt:  EDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPIN

Query:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME
        IIFREPEQMMSP  V N+ G PAKTDPV Q+  S EK +VLEERLRA+EGT+VFGN DASQLCLVS LV+PPKFKVPEFEKYDGSSCP N+ IMY RKM 
Subjt:  IIFREPEQMMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKME

Query:  AYVQNDKI
        AYVQN K+
Subjt:  AYVQNDKI

A0A6J1E2J7 Ribonuclease H1.5e-3679Show/hide
Query:  MMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI
        MMSP  VLN+ GLPAKTD V Q+  SNEKF+VLEERLRA+EGT VFGN DASQLCLVS LV+PPKFKVPEFEKYDGSSCP N+ IMY RKM AYVQNDK+
Subjt:  MMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAAGATCAAAAAGTTGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGCGAAAAGTTAGATGCCATCCTCCTCGCGTTAGAAAAAGGCAAGGCAGCTGT
GAATCCTGCTACATCTAGCAACCCCGCCCATGAGCTGCAAGAAACCCCGCCTTATCCACCTGGGCACGGTCCACCTCTTAGACCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTACAACTCTCTGTGTGACGTCTCGATTGGTCAATATCTACATCCCTTTGTTAAGGGAGCTCAGCAAATCCCAATTAACATCATTTTTCGAGAGCCTGAGCAA
ATGATGTCACCTCTTCCAGTCCTTAATATAAGTGGTCTCCCAGCCAAGACAGACCCAGTCAGACAAAGTGTCACCAGTAACGAGAAGTTCAAAGTTCTGGAAGAAAGATT
AAGAGCAGTAGAGGGGACGAATGTTTTTGGCAATTTTGATGCCTCTCAATTATGTTTGGTATCTGAATTAGTCCTCCCTCCGAAATTTAAGGTGCCAGAATTCGAGAAAT
ATGATGGTTCTTCTTGTCCTACGAACTACTTTATAATGTACTACAGGAAGATGGAAGCATACGTCCAAAATGACAAAATTTTTGATACACTGTTTTCAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAAGATCAAAAAGTTGAGCAGGAGAAAACAAGGAAAGATATTGAGGAGTTGCGCGAAAAGTTAGATGCCATCCTCCTCGCGTTAGAAAAAGGCAAGGCAGCTGT
GAATCCTGCTACATCTAGCAACCCCGCCCATGAGCTGCAAGAAACCCCGCCTTATCCACCTGGGCACGGTCCACCTCTTAGACCAGTGGCAGAGGGTTTCATGCCACAAT
ATACAACGTACAACTCTCTGTGTGACGTCTCGATTGGTCAATATCTACATCCCTTTGTTAAGGGAGCTCAGCAAATCCCAATTAACATCATTTTTCGAGAGCCTGAGCAA
ATGATGTCACCTCTTCCAGTCCTTAATATAAGTGGTCTCCCAGCCAAGACAGACCCAGTCAGACAAAGTGTCACCAGTAACGAGAAGTTCAAAGTTCTGGAAGAAAGATT
AAGAGCAGTAGAGGGGACGAATGTTTTTGGCAATTTTGATGCCTCTCAATTATGTTTGGTATCTGAATTAGTCCTCCCTCCGAAATTTAAGGTGCCAGAATTCGAGAAAT
ATGATGGTTCTTCTTGTCCTACGAACTACTTTATAATGTACTACAGGAAGATGGAAGCATACGTCCAAAATGACAAAATTTTTGATACACTGTTTTCAGGATAG
Protein sequenceShow/hide protein sequence
MKEDQKVEQEKTRKDIEELREKLDAILLALEKGKAAVNPATSSNPAHELQETPPYPPGHGPPLRPVAEGFMPQYTTYNSLCDVSIGQYLHPFVKGAQQIPINIIFREPEQ
MMSPLPVLNISGLPAKTDPVRQSVTSNEKFKVLEERLRAVEGTNVFGNFDASQLCLVSELVLPPKFKVPEFEKYDGSSCPTNYFIMYYRKMEAYVQNDKIFDTLFSG