; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04690 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04690
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr3:3525756..3527548
RNA-Seq ExpressionMoc03g04690
SyntenyMoc03g04690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]3.3e-2228.03Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        MY+ V +  LRA++   DPAY CFTF   ++  TIEEY  +L +P +E+  VY ++   T KR +S  +  + A EI+K +K KG   ++  +Y++ + Q
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK-------------------------------------------------------FSRS
         +++E++ L+LLALC++  V+FPK  G+ + +V+KLF +++                                                       FS  
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK-------------------------------------------------------FSRS

Query:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGLRGKTVV
        W+ ++N+I EF        +  KE W +FF  L  + V+
Subjt:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGLRGKTVV

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.6e-2325.19Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        +Y  +    L+AL    DP  +CFTF+  D+T TIEEY  L+ +P+     +Y YD   TL+R++S  +  I A E++K +K K     + I Y+++L +
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK--------------FSRSWSRLQ-----------------NSILEFNQGELSQIHLEKE
          +  +  LSL+ALC++  V+FP++ G+ EE VVK+FV ++               S +  R+Q                 + + + ++ +  ++ LEKE
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK--------------FSRSWSRLQ-----------------NSILEFNQGELSQIHLEKE

Query:  --EWNTFFVGLRGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKVRRIEYEPQGGNPTRAKILSLREKEVQLAQYAQENQRLRETVQELMSHLDKT
            NT  + +R K   LL       + E+ A++          T + +  +++             S+ E + QL +   +N  L++ V    S L   
Subjt:  --EWNTFFVGLRGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKVRRIEYEPQGGNPTRAKILSLREKEVQLAQYAQENQRLRETVQELMSHLDKT

Query:  QNVADGLMQDYAHIKEQYNQVGYELDLVRCDNTLLRHNSKHVL-------TQVRQAACRADGLVEEARALMSAIAPTHPNGKSRLNFLGKLRQ
        +     +  DYA + E+Y ++  +  + + +   LR      +        ++RQ A  AD    +AR L   + PT    K   +FLG + Q
Subjt:  QNVADGLMQDYAHIKEQYNQVGYELDLVRCDNTLLRHNSKHVL-------TQVRQAACRADGLVEEARALMSAIAPTHPNGKSRLNFLGKLRQ

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]1.0e-2329.71Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        MY+ V +  LRA++   DPAY CFTF   D+  TIEEY  +L +P +E+  VY ++   T KR +S  +  + A EI+K +K KG   ++  +Y++ + Q
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK-------------------------------------------------------FSRS
         +V+E++ L+LLALC++  V+FPK  G+ + +V+KLF +++                                                       FS  
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK-------------------------------------------------------FSRS

Query:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGLRGKTVV
        W+ ++N+I EF        +  KE W +FF  L  K VV
Subjt:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGLRGKTVV

XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]1.2e-6943.61Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        +YVRV F VLRALV+H DP YRCFTFS MDIT TIEEYHTLLQIPLQEKIEVYSYD GFTLKRAVSLLV KISA EIEK VKRKGENT L IEYI SLQ 
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVK-------------------------------------------------------VKFSRS
        RFVNEERELSLLALCLFNLVLFP VS + EE VVKLFVK                                                       VKFSRS
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVK-------------------------------------------------------VKFSRS

Query:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGL-------------------------------------------------------------------
        WSRLQN +LEFNQ + SQIH  KEEW+ FF GL                                                                   
Subjt:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGL-------------------------------------------------------------------

Query:  ----------------------------------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQ----LKVRRIEYEPQGGNPTRAKIL
                                                RGKTVVLLPTDKGKGKLEVP RRIL EMSPNQSTQ     K+ R     +     R   L
Subjt:  ----------------------------------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQ----LKVRRIEYEPQGGNPTRAKIL

Query:  SLREKEVQLAQYAQENQRLRETVQELMSHLDKTQNVAD
         + +++ +  +  ++ + LRE +  ++  L+K ++ AD
Subjt:  SLREKEVQLAQYAQENQRLRETVQELMSHLDKTQNVAD

XP_022150759.1 uncharacterized protein LOC111018820 [Momordica charantia]6.3e-5846.29Show/hide
Query:  MDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGH
        M+IT TI+EYHTLLQIPLQEKIEVYSYD GFTLKRAVSLLV KISAGEIEK VKRKGENT L IEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSG+
Subjt:  MDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGH

Query:  SEERVVKLFVK-------------------------------------------------------VKFSRSWSRLQNSILEFNQGELSQIHLEKEEWNT
         EER+VKLFVK                                                       VKFSRSWSRLQN ILEFNQ + SQIH  KEEW+ 
Subjt:  SEERVVKLFVK-------------------------------------------------------VKFSRSWSRLQNSILEFNQGELSQIHLEKEEWNT

Query:  FFVGL-----------------------------------------------------------------------------------------------
        FF GL                                                                                               
Subjt:  FFVGL-----------------------------------------------------------------------------------------------

Query:  ------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKV
                    RGKTVVLL TDKGKGKLEVP   IL EMSPNQSTQ KV
Subjt:  ------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKV

TrEMBL top hitse value%identityAlignment
A0A5A7T6E2 Girdin-like1.6e-2238.3Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        MY+ V +  LRA++   DPAY CFTF   D+  TIEEY  +L +P +E+  VY ++   T KR +S  +  + A EI+K +K KG   ++  +Y++ + Q
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK
         +++E++ L+LLALC++  V+FPK  G+ + +V+KLF +++
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK

A0A5A7TXA1 Glial fibrillary acidic protein-like4.2e-2325.19Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        +Y  +    L+AL    DP  +CFTF+  D+T TIEEY  L+ +P+     +Y YD   TL+R++S  +  I A E++K +K K     + I Y+++L +
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK--------------FSRSWSRLQ-----------------NSILEFNQGELSQIHLEKE
          +  +  LSL+ALC++  V+FP++ G+ EE VVK+FV ++               S +  R+Q                 + + + ++ +  ++ LEKE
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK--------------FSRSWSRLQ-----------------NSILEFNQGELSQIHLEKE

Query:  --EWNTFFVGLRGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKVRRIEYEPQGGNPTRAKILSLREKEVQLAQYAQENQRLRETVQELMSHLDKT
            NT  + +R K   LL       + E+ A++          T + +  +++             S+ E + QL +   +N  L++ V    S L   
Subjt:  --EWNTFFVGLRGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKVRRIEYEPQGGNPTRAKILSLREKEVQLAQYAQENQRLRETVQELMSHLDKT

Query:  QNVADGLMQDYAHIKEQYNQVGYELDLVRCDNTLLRHNSKHVL-------TQVRQAACRADGLVEEARALMSAIAPTHPNGKSRLNFLGKLRQ
        +     +  DYA + E+Y ++  +  + + +   LR      +        ++RQ A  AD    +AR L   + PT    K   +FLG + Q
Subjt:  QNVADGLMQDYAHIKEQYNQVGYELDLVRCDNTLLRHNSKHVL-------TQVRQAACRADGLVEEARALMSAIAPTHPNGKSRLNFLGKLRQ

A0A5A7UWQ6 Uncharacterized protein4.9e-2429.71Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        MY+ V +  LRA++   DPAY CFTF   D+  TIEEY  +L +P +E+  VY ++   T KR +S  +  + A EI+K +K KG   ++  +Y++ + Q
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK-------------------------------------------------------FSRS
         +V+E++ L+LLALC++  V+FPK  G+ + +V+KLF +++                                                       FS  
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVKVK-------------------------------------------------------FSRS

Query:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGLRGKTVV
        W+ ++N+I EF        +  KE W +FF  L  K VV
Subjt:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGLRGKTVV

A0A6J1CZG4 uncharacterized protein LOC1110162015.9e-7043.61Show/hide
Query:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ
        +YVRV F VLRALV+H DP YRCFTFS MDIT TIEEYHTLLQIPLQEKIEVYSYD GFTLKRAVSLLV KISA EIEK VKRKGENT L IEYI SLQ 
Subjt:  MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQ

Query:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVK-------------------------------------------------------VKFSRS
        RFVNEERELSLLALCLFNLVLFP VS + EE VVKLFVK                                                       VKFSRS
Subjt:  RFVNEERELSLLALCLFNLVLFPKVSGHSEERVVKLFVK-------------------------------------------------------VKFSRS

Query:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGL-------------------------------------------------------------------
        WSRLQN +LEFNQ + SQIH  KEEW+ FF GL                                                                   
Subjt:  WSRLQNSILEFNQGELSQIHLEKEEWNTFFVGL-------------------------------------------------------------------

Query:  ----------------------------------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQ----LKVRRIEYEPQGGNPTRAKIL
                                                RGKTVVLLPTDKGKGKLEVP RRIL EMSPNQSTQ     K+ R     +     R   L
Subjt:  ----------------------------------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQ----LKVRRIEYEPQGGNPTRAKIL

Query:  SLREKEVQLAQYAQENQRLRETVQELMSHLDKTQNVAD
         + +++ +  +  ++ + LRE +  ++  L+K ++ AD
Subjt:  SLREKEVQLAQYAQENQRLRETVQELMSHLDKTQNVAD

A0A6J1DB13 uncharacterized protein LOC1110188203.1e-5846.29Show/hide
Query:  MDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGH
        M+IT TI+EYHTLLQIPLQEKIEVYSYD GFTLKRAVSLLV KISAGEIEK VKRKGENT L IEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSG+
Subjt:  MDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQRFVNEERELSLLALCLFNLVLFPKVSGH

Query:  SEERVVKLFVK-------------------------------------------------------VKFSRSWSRLQNSILEFNQGELSQIHLEKEEWNT
         EER+VKLFVK                                                       VKFSRSWSRLQN ILEFNQ + SQIH  KEEW+ 
Subjt:  SEERVVKLFVK-------------------------------------------------------VKFSRSWSRLQNSILEFNQGELSQIHLEKEEWNT

Query:  FFVGL-----------------------------------------------------------------------------------------------
        FF GL                                                                                               
Subjt:  FFVGL-----------------------------------------------------------------------------------------------

Query:  ------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKV
                    RGKTVVLL TDKGKGKLEVP   IL EMSPNQSTQ KV
Subjt:  ------------RGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGTACGAGTCAAATTCTTAGTGTTGAGAGCATTAGTTCGACATTTGGATCCGGCCTATAGATGCTTCACTTTTAGCTTAATGGATATAACCCTAACTATTGAGGA
ATACCACACTCTATTACAAATACCACTGCAAGAGAAAATTGAGGTTTATTCCTATGATAATGGGTTTACATTGAAAAGGGCGGTATCGTTGCTTGTACGAAAGATATCTG
CTGGTGAGATTGAAAAAGACGTGAAAAGGAAGGGAGAAAACACAAGCTTGCAGATAGAATATATCCTGAGTCTTCAACAGAGATTCGTTAATGAAGAAAGGGAGCTATCA
CTGTTAGCTCTGTGCTTATTCAACTTGGTTTTATTCCCTAAAGTTAGTGGGCACAGTGAAGAGCGAGTGGTCAAGCTATTTGTTAAGGTCAAATTTTCAAGATCATGGAG
TAGATTGCAGAATTCCATCCTTGAATTCAACCAAGGGGAGTTGAGTCAAATCCACCTAGAGAAAGAGGAGTGGAACACTTTCTTCGTAGGACTAAGGGGAAAAACTGTGG
TTCTTCTACCAACCGACAAAGGCAAAGGGAAGCTAGAGGTTCCCGCCAGGAGAATTCTTGTCGAAATGAGCCCAAATCAGTCTACTCAACTGAAGGTTCGCAGGATAGAG
TACGAGCCGCAAGGAGGGAACCCCACAAGAGCAAAAATCTTGTCACTTCGTGAAAAAGAGGTACAATTAGCTCAATATGCCCAAGAAAATCAACGATTGAGGGAAACTGT
TCAGGAGCTTATGAGTCATCTCGATAAAACCCAGAATGTTGCTGATGGGTTAATGCAGGATTATGCCCATATCAAGGAACAATACAACCAAGTGGGGTATGAATTAGACC
TTGTGAGGTGCGATAACACATTGTTACGTCATAATTCAAAACATGTTCTCACCCAAGTTAGACAGGCAGCATGTAGGGCAGATGGTTTAGTTGAAGAGGCACGAGCTCTC
ATGTCTGCCATTGCCCCTACACACCCGAATGGCAAAAGCAGACTAAATTTCCTGGGCAAACTTCGGCAAGATGTAAAGCATTGGGGACAGTTAACACTCTACTTTAATGT
ACTTTCAATTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTACGTACGAGTCAAATTCTTAGTGTTGAGAGCATTAGTTCGACATTTGGATCCGGCCTATAGATGCTTCACTTTTAGCTTAATGGATATAACCCTAACTATTGAGGA
ATACCACACTCTATTACAAATACCACTGCAAGAGAAAATTGAGGTTTATTCCTATGATAATGGGTTTACATTGAAAAGGGCGGTATCGTTGCTTGTACGAAAGATATCTG
CTGGTGAGATTGAAAAAGACGTGAAAAGGAAGGGAGAAAACACAAGCTTGCAGATAGAATATATCCTGAGTCTTCAACAGAGATTCGTTAATGAAGAAAGGGAGCTATCA
CTGTTAGCTCTGTGCTTATTCAACTTGGTTTTATTCCCTAAAGTTAGTGGGCACAGTGAAGAGCGAGTGGTCAAGCTATTTGTTAAGGTCAAATTTTCAAGATCATGGAG
TAGATTGCAGAATTCCATCCTTGAATTCAACCAAGGGGAGTTGAGTCAAATCCACCTAGAGAAAGAGGAGTGGAACACTTTCTTCGTAGGACTAAGGGGAAAAACTGTGG
TTCTTCTACCAACCGACAAAGGCAAAGGGAAGCTAGAGGTTCCCGCCAGGAGAATTCTTGTCGAAATGAGCCCAAATCAGTCTACTCAACTGAAGGTTCGCAGGATAGAG
TACGAGCCGCAAGGAGGGAACCCCACAAGAGCAAAAATCTTGTCACTTCGTGAAAAAGAGGTACAATTAGCTCAATATGCCCAAGAAAATCAACGATTGAGGGAAACTGT
TCAGGAGCTTATGAGTCATCTCGATAAAACCCAGAATGTTGCTGATGGGTTAATGCAGGATTATGCCCATATCAAGGAACAATACAACCAAGTGGGGTATGAATTAGACC
TTGTGAGGTGCGATAACACATTGTTACGTCATAATTCAAAACATGTTCTCACCCAAGTTAGACAGGCAGCATGTAGGGCAGATGGTTTAGTTGAAGAGGCACGAGCTCTC
ATGTCTGCCATTGCCCCTACACACCCGAATGGCAAAAGCAGACTAAATTTCCTGGGCAAACTTCGGCAAGATGTAAAGCATTGGGGACAGTTAACACTCTACTTTAATGT
ACTTTCAATTTCATGA
Protein sequenceShow/hide protein sequence
MYVRVKFLVLRALVRHLDPAYRCFTFSLMDITLTIEEYHTLLQIPLQEKIEVYSYDNGFTLKRAVSLLVRKISAGEIEKDVKRKGENTSLQIEYILSLQQRFVNEERELS
LLALCLFNLVLFPKVSGHSEERVVKLFVKVKFSRSWSRLQNSILEFNQGELSQIHLEKEEWNTFFVGLRGKTVVLLPTDKGKGKLEVPARRILVEMSPNQSTQLKVRRIE
YEPQGGNPTRAKILSLREKEVQLAQYAQENQRLRETVQELMSHLDKTQNVADGLMQDYAHIKEQYNQVGYELDLVRCDNTLLRHNSKHVLTQVRQAACRADGLVEEARAL
MSAIAPTHPNGKSRLNFLGKLRQDVKHWGQLTLYFNVLSIS