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Moc03g04700 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04700
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-H2 finger protein ATL14-like
Genome locationchr3:3534178..3534600
RNA-Seq ExpressionMoc03g04700
SyntenyMoc03g04700
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067736.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]2.0e-1739.86Show/hide
Query:  GFMFVAVVCAFSISLMFVFHYY-------KTRVHDTESRSQPQTAEQIPAS-----------------------------AVAYREEIRDCGGR---CAI
        GF+FV+VVC   I ++F+FH Y       +TR  D E R       Q+ A                               VAY+ +  + GG    CAI
Subjt:  GFMFVAVVCAFSISLMFVFHYY-------KTRVHDTESRSQPQTAEQIPAS-----------------------------AVAYREEIRDCGGR---CAI

Query:  CIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        CIE F +EE CGV+E+CGH FH+DC+D+WL+IESRCPLCRC +
Subjt:  CIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

TYJ97407.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]2.7e-1738.3Show/hide
Query:  GFMFVAVVCAFSISLMFVFHYYKTRVHDTE-------------------------------SRSQPQTAEQIPASA---VAYREEIRDCGGR---CAICI
        GF+FV+VVC   I  +F  ++Y+ R++ T                                ++S   T  +  +SA   VAY+ +  + GG    CAICI
Subjt:  GFMFVAVVCAFSISLMFVFHYYKTRVHDTE-------------------------------SRSQPQTAEQIPASA---VAYREEIRDCGGR---CAICI

Query:  EGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        E F +EE CGV+E+CGH FH+DC+D+WL+IESRCPLCRC +
Subjt:  EGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

XP_022158249.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]2.6e-2040.23Show/hide
Query:  MLISPSPPPQ---------TTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYY-------KTRVH-DTESRSQ-------------------
        M   P+PPP          T    HR+TF          GF FV  +C   I L F+ + Y       +TRV+ D ESR Q                   
Subjt:  MLISPSPPPQ---------TTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYY-------KTRVH-DTESRSQ-------------------

Query:  -PQTAEQIPASAVAY--REEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIV
         PQT E+  A+AVA    EEI D    CAIC EGF E++ C VIE CGHFFHKDC+D+WL +E  CPLCRC ++
Subjt:  -PQTAEQIPASAVAY--REEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIV

XP_022158253.1 RING-H2 finger protein ATL14-like [Momordica charantia]2.3e-77100Show/hide
Query:  MLISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYYKTRVHDTESRSQPQTAEQIPASAVAYREEIRDCGGRCAICIEGFAEEE
        MLISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYYKTRVHDTESRSQPQTAEQIPASAVAYREEIRDCGGRCAICIEGFAEEE
Subjt:  MLISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYYKTRVHDTESRSQPQTAEQIPASAVAYREEIRDCGGRCAICIEGFAEEE

Query:  KCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP
        KCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP
Subjt:  KCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP

XP_031742489.1 RING-H2 finger protein ATL1-like [Cucumis sativus]3.1e-3457.05Show/hide
Query:  SPSPPP---QTT------AAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHY-YKTR---VHDTESRSQ------PQTAEQIPASA-VAYRE---
        SPSPPP    TT        IH + FHLT RL +ASG M VAV+CA  I  MF+FHY Y  R   VH     SQ       +T+E+IPAS  + +RE   
Subjt:  SPSPPP---QTT------AAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHY-YKTR---VHDTESRSQ------PQTAEQIPASA-VAYRE---

Query:  -EIRDCGGR-CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
         EI DC GR CAICIEGF EEE CGVIENCGHFFH+DCI+RWL+IE RCPLCRC +
Subjt:  -EIRDCGGR-CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

TrEMBL top hitse value%identityAlignment
A0A1S4E1K2 RING-type E3 ubiquitin transferase5.4e-1651.16Show/hide
Query:  RVHDTESRSQPQTAEQIPASA---VAYREEIRDCGGR---CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        R   T ++S   T  +  +SA   VAY+ +  + GG    CAICIE F +EE CGV+E+CGH FH+DC+D+WL+IESRCPLCRC +
Subjt:  RVHDTESRSQPQTAEQIPASA---VAYREEIRDCGGR---CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

A0A5A7VMH1 RING-H2 finger protein ATL52-like9.9e-1839.86Show/hide
Query:  GFMFVAVVCAFSISLMFVFHYY-------KTRVHDTESRSQPQTAEQIPAS-----------------------------AVAYREEIRDCGGR---CAI
        GF+FV+VVC   I ++F+FH Y       +TR  D E R       Q+ A                               VAY+ +  + GG    CAI
Subjt:  GFMFVAVVCAFSISLMFVFHYY-------KTRVHDTESRSQPQTAEQIPAS-----------------------------AVAYREEIRDCGGR---CAI

Query:  CIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        CIE F +EE CGV+E+CGH FH+DC+D+WL+IESRCPLCRC +
Subjt:  CIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

A0A5D3BE50 RING-type E3 ubiquitin transferase1.3e-1738.3Show/hide
Query:  GFMFVAVVCAFSISLMFVFHYYKTRVHDTE-------------------------------SRSQPQTAEQIPASA---VAYREEIRDCGGR---CAICI
        GF+FV+VVC   I  +F  ++Y+ R++ T                                ++S   T  +  +SA   VAY+ +  + GG    CAICI
Subjt:  GFMFVAVVCAFSISLMFVFHYYKTRVHDTE-------------------------------SRSQPQTAEQIPASA---VAYREEIRDCGGR---CAICI

Query:  EGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        E F +EE CGV+E+CGH FH+DC+D+WL+IESRCPLCRC +
Subjt:  EGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

A0A6J1DVK4 RING-H2 finger protein ATL14-like1.1e-77100Show/hide
Query:  MLISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYYKTRVHDTESRSQPQTAEQIPASAVAYREEIRDCGGRCAICIEGFAEEE
        MLISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYYKTRVHDTESRSQPQTAEQIPASAVAYREEIRDCGGRCAICIEGFAEEE
Subjt:  MLISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYYKTRVHDTESRSQPQTAEQIPASAVAYREEIRDCGGRCAICIEGFAEEE

Query:  KCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP
        KCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP
Subjt:  KCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP

A0A6J1DYV0 E3 ubiquitin-protein ligase RING1-like1.2e-2040.23Show/hide
Query:  MLISPSPPPQ---------TTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYY-------KTRVH-DTESRSQ-------------------
        M   P+PPP          T    HR+TF          GF FV  +C   I L F+ + Y       +TRV+ D ESR Q                   
Subjt:  MLISPSPPPQ---------TTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYY-------KTRVH-DTESRSQ-------------------

Query:  -PQTAEQIPASAVAY--REEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIV
         PQT E+  A+AVA    EEI D    CAIC EGF E++ C VIE CGHFFHKDC+D+WL +E  CPLCRC ++
Subjt:  -PQTAEQIPASAVAY--REEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIV

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL19.5e-1045.76Show/hide
Query:  VAYREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        VA  E+       C++C+  F E+EK  +I NC H FH DCID WL+  + CPLCR S+
Subjt:  VAYREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

Q9LF64 RING-H2 finger protein ATL522.1e-0943.64Show/hide
Query:  GGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP
        G  C++C+  F E E   ++  C H FH  CID WLK  S CPLCR  +   N P
Subjt:  GGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP

Q9LRB7 E3 ubiquitin-protein ligase EL55.6e-1038.27Show/hide
Query:  RSQPQT--AEQIPASAVAYREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP
        RS P T  +    A+A    EE  D G  CA+C+    + E+   +  CGH FH +C+D WL   S CPLCR ++V    P
Subjt:  RSQPQT--AEQIPASAVAYREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP

Q9LSW9 RING-H2 finger protein ATL161.6e-0945.45Show/hide
Query:  EEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        EE       C++C+  F +EEK  +I NC H FH DCID WL+  + CPLCR  +
Subjt:  EEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

Q9SRM0 RING-H2 finger protein ATL661.1e-1058.7Show/hide
Query:  CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        C IC+ GF E EK  V+  C H +H +C+DRWLK ES CPLCR SI
Subjt:  CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein6.8e-1145.76Show/hide
Query:  VAYREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        VA  E+       C++C+  F E+EK  +I NC H FH DCID WL+  + CPLCR S+
Subjt:  VAYREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

AT2G27940.1 RING/U-box superfamily protein2.0e-1026.35Show/hide
Query:  ISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVF--HYYKTRVHDTESRSQPQT------AEQIPASAVA-----------------
        ++P+PPPQ  +A+  +T  LT         +F+ +V  F +    V+  H+  +     +  S P+T        ++  S V                  
Subjt:  ISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVF--HYYKTRVHDTESRSQPQT------AEQIPASAVA-----------------

Query:  -----YREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNR
             Y +  +     C IC+  F E E   VI +CGH FH DC+D WL     CPLCR + +F ++
Subjt:  -----YREEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNR

AT3G11110.1 RING/U-box superfamily protein8.0e-1258.7Show/hide
Query:  CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        C IC+ GF E EK  V+  C H +H +C+DRWLK ES CPLCR SI
Subjt:  CAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI

AT5G17600.1 RING/U-box superfamily protein1.5e-1043.64Show/hide
Query:  GGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP
        G  C++C+  F E E   ++  C H FH  CID WLK  S CPLCR  +   N P
Subjt:  GGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP

AT5G43420.1 RING/U-box superfamily protein1.2e-1045.45Show/hide
Query:  EEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI
        EE       C++C+  F +EEK  +I NC H FH DCID WL+  + CPLCR  +
Subjt:  EEIRDCGGRCAICIEGFAEEEKCGVIENCGHFFHKDCIDRWLKIESRCPLCRCSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATTTCCCCGTCTCCTCCGCCGCAGACGACGGCGGCCATCCACCGGAATACTTTTCACCTGACACGCAGATTATGGGTCGCCAGCGGATTCATGTTCGTG
GCGGTGGTTTGTGCTTTTTCAATTTCGTTAATGTTCGTTTTCCATTACTACAAGACAAGAGTCCACGACACCGAATCCAGATCGCAACCGCAGACGGCGGAGCAA
ATTCCGGCCTCCGCGGTGGCTTACAGAGAGGAAATTAGGGATTGCGGCGGCCGATGCGCGATCTGCATTGAGGGATTTGCGGAGGAAGAGAAGTGTGGAGTTATT
GAAAATTGCGGCCATTTTTTCCATAAGGATTGTATCGATCGGTGGCTGAAGATTGAGAGCCGTTGCCCACTCTGCCGCTGTTCTATTGTTTTTCAGAATCGTCCA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCTAATTTCCCCGTCTCCTCCGCCGCAGACGACGGCGGCCATCCACCGGAATACTTTTCACCTGACACGCAGATTATGGGTCGCCAGCGGATTCATGTTCGTG
GCGGTGGTTTGTGCTTTTTCAATTTCGTTAATGTTCGTTTTCCATTACTACAAGACAAGAGTCCACGACACCGAATCCAGATCGCAACCGCAGACGGCGGAGCAA
ATTCCGGCCTCCGCGGTGGCTTACAGAGAGGAAATTAGGGATTGCGGCGGCCGATGCGCGATCTGCATTGAGGGATTTGCGGAGGAAGAGAAGTGTGGAGTTATT
GAAAATTGCGGCCATTTTTTCCATAAGGATTGTATCGATCGGTGGCTGAAGATTGAGAGCCGTTGCCCACTCTGCCGCTGTTCTATTGTTTTTCAGAATCGTCCA
TGA
Protein sequenceShow/hide protein sequence
MLISPSPPPQTTAAIHRNTFHLTRRLWVASGFMFVAVVCAFSISLMFVFHYYKTRVHDTESRSQPQTAEQIPASAVAYREEIRDCGGRCAICIEGFAEEEKCGVI
ENCGHFFHKDCIDRWLKIESRCPLCRCSIVFQNRP