; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04710 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04710
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr3:3536728..3537225
RNA-Seq ExpressionMoc03g04710
SyntenyMoc03g04710
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155478.1 RING-H2 finger protein ATL1-like [Momordica charantia]1.2e-1643.86Show/hide
Query:  CLLYLFFVLIF--FRSRAGESAAVETEMTPAPAR-VKCVFVETTDFRCSG---GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCR
        C++++ + + F  ++SR  ES    T +  AP R ++ V +E + F C G   GEEC ICL  +++GE+ W+ MSKC H+FHR CI  WLK  R CPLCR
Subjt:  CLLYLFFVLIF--FRSRAGESAAVETEMTPAPAR-VKCVFVETTDFRCSG---GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCR

Query:  SSVSVFVRCGNTAL
        S V V V  GN  +
Subjt:  SSVSVFVRCGNTAL

XP_022158250.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]6.5e-1540.99Show/hide
Query:  LGASVRFPSTLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVK--CVFVETTDFRCSGG----
        + +S   PST S       V++TL     GLP   E      MF+  ++ LF V    R     S   E E  P   R +   V V+ +DF   GG    
Subjt:  LGASVRFPSTLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVK--CVFVETTDFRCSGG----

Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALP
        +ECAICL  +EEGE K  KMS+CGHIFHR CI  WL+V R CPLCR  V + V   NT +P
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALP

XP_022158251.1 RING-H2 finger protein ATL1-like [Momordica charantia]1.2e-1639.35Show/hide
Query:  PSTLS-SEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGG----EECAICLC
        PS LS    PL+AV+ +L      LP + ++   + MFL  +LY+F + +      G +     E  P     K + +E   F   G     EECAICL 
Subjt:  PSTLS-SEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGG----EECAICLC

Query:  VYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALPPA
         +E+GE K  KMSKC H+FHR CI  WLK  R CPLCR+S+ + V  G+  +PPA
Subjt:  VYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALPPA

XP_022158252.1 E3 ubiquitin-protein ligase RHA2B-like [Momordica charantia]8.5e-2346.62Show/hide
Query:  STLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGE
        S LS + PLDAV+    D    LP+      A+V+F+  L Y+   L      AGE   V       PA+++ +  E ++F   GG EC ICLC YEEGE
Subjt:  STLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGE

Query:  RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS-VFVRCGNTALP
         KW+KM KCGHIFHR CI+ WL VGR CPLCRS +S V V CG   +P
Subjt:  RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS-VFVRCGNTALP

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]1.6e-1343.15Show/hide
Query:  PSTLSSEAPLDAVNRTLLDFDLGLP-INRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDF---RCSGG--EECAICL
        PS  +S  P+ A+ +T      GL   N  L    + FL  +LYL  +L FF+S   ES +      P     + V +E + F      GG  +ECAICL
Subjt:  PSTLSSEAPLDAVNRTLLDFDLGLP-INRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDF---RCSGG--EECAICL

Query:  CVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFV
          +E+G+ K  KM+KCGHIFHRRCI  WLKV R CPLCRS V V V
Subjt:  CVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFV

TrEMBL top hitse value%identityAlignment
A0A6J1DN25 RING-H2 finger protein ATL1-like5.8e-1743.86Show/hide
Query:  CLLYLFFVLIF--FRSRAGESAAVETEMTPAPAR-VKCVFVETTDFRCSG---GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCR
        C++++ + + F  ++SR  ES    T +  AP R ++ V +E + F C G   GEEC ICL  +++GE+ W+ MSKC H+FHR CI  WLK  R CPLCR
Subjt:  CLLYLFFVLIF--FRSRAGESAAVETEMTPAPAR-VKCVFVETTDFRCSG---GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCR

Query:  SSVSVFVRCGNTAL
        S V V V  GN  +
Subjt:  SSVSVFVRCGNTAL

A0A6J1DVB5 RING-type E3 ubiquitin transferase3.2e-1540.99Show/hide
Query:  LGASVRFPSTLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVK--CVFVETTDFRCSGG----
        + +S   PST S       V++TL     GLP   E      MF+  ++ LF V    R     S   E E  P   R +   V V+ +DF   GG    
Subjt:  LGASVRFPSTLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVK--CVFVETTDFRCSGG----

Query:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALP
        +ECAICL  +EEGE K  KMS+CGHIFHR CI  WL+V R CPLCR  V + V   NT +P
Subjt:  EECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALP

A0A6J1DWR6 E3 ubiquitin-protein ligase RHA2B-like4.1e-2346.62Show/hide
Query:  STLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGE
        S LS + PLDAV+    D    LP+      A+V+F+  L Y+   L      AGE   V       PA+++ +  E ++F   GG EC ICLC YEEGE
Subjt:  STLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGE

Query:  RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS-VFVRCGNTALP
         KW+KM KCGHIFHR CI+ WL VGR CPLCRS +S V V CG   +P
Subjt:  RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVS-VFVRCGNTALP

A0A6J1E0E9 RING-H2 finger protein ATL1-like5.8e-1739.35Show/hide
Query:  PSTLS-SEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGG----EECAICLC
        PS LS    PL+AV+ +L      LP + ++   + MFL  +LY+F + +      G +     E  P     K + +E   F   G     EECAICL 
Subjt:  PSTLS-SEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGG----EECAICLC

Query:  VYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALPPA
         +E+GE K  KMSKC H+FHR CI  WLK  R CPLCR+S+ + V  G+  +PPA
Subjt:  VYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALPPA

A0A6J1KAT3 RING-type E3 ubiquitin transferase7.8e-1443.15Show/hide
Query:  PSTLSSEAPLDAVNRTLLDFDLGLP-INRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDF---RCSGG--EECAICL
        PS  +S  P+ A+ +T      GL   N  L    + FL  +LYL  +L FF+S   ES +      P     + V +E + F      GG  +ECAICL
Subjt:  PSTLSSEAPLDAVNRTLLDFDLGLP-INRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDF---RCSGG--EECAICL

Query:  CVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFV
          +E+G+ K  KM+KCGHIFHRRCI  WLKV R CPLCRS V V V
Subjt:  CVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFV

SwissProt top hitse value%identityAlignment
O64763 E3 ubiquitin-protein ligase ATL93.6e-0836.9Show/hide
Query:  SRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV
        +R  ++ A+ET  T   + VK V +        GG ECA+CLC +E+ E   + M  C H+FH  C+  WL     CPLCR+ +
Subjt:  SRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV

O80927 RING-H2 finger protein ATL338.9e-0744.23Show/hide
Query:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        G EC++CL V+ + + +  ++S+C H FH  CI+ WLK    CP+CR+ VSV
Subjt:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

Q9M0C3 RING-H2 finger protein ATL146.8e-0729.1Show/hide
Query:  RTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIF------FRSRAGESAAVETEMTPAPARVKCV--FVETTDFRCSGGEECAICLCVYEEGERKWV-
        + L +F +GL +     TA +  L  L + FF   +      +R R       E     +P  VK +  F         GG++C +C+  + +G+  W  
Subjt:  RTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIF------FRSRAGESAAVETEMTPAPARVKCV--FVETTDFRCSGGEECAICLCVYEEGERKWV-

Query:  KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF
        K+ +CGH+FHR+C+  WL     CP+CR  V  F
Subjt:  KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF

Q9M0R4 Putative RING-H2 finger protein ATL373.6e-0847.27Show/hide
Query:  SGGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        +GG ECAICLC +E+ E  +W  M  C H FH  CI  WL     CP+CR+++S+
Subjt:  SGGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

Q9ZT50 E3 ubiquitin-protein ligase RHA2A1.1e-0741.67Show/hide
Query:  FRC----SGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV
        +RC     GG +C +CL   +EGE   V+  +C H+FH++C++GWL +    CPLCRS++
Subjt:  FRC----SGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A7.5e-0941.67Show/hide
Query:  FRC----SGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV
        +RC     GG +C +CL   +EGE   V+  +C H+FH++C++GWL +    CPLCRS++
Subjt:  FRC----SGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWL-KVGRRCPLCRSSV

AT2G35000.1 RING/U-box superfamily protein2.6e-0936.9Show/hide
Query:  SRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV
        +R  ++ A+ET  T   + VK V +        GG ECA+CLC +E+ E   + M  C H+FH  C+  WL     CPLCR+ +
Subjt:  SRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSV

AT2G37580.1 RING/U-box superfamily protein6.3e-0844.23Show/hide
Query:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        G EC++CL V+ + + +  ++S+C H FH  CI+ WLK    CP+CR+ VSV
Subjt:  GEECAICLCVYEEGERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

AT4G09130.1 RING/U-box superfamily protein2.6e-0947.27Show/hide
Query:  SGGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV
        +GG ECAICLC +E+ E  +W  M  C H FH  CI  WL     CP+CR+++S+
Subjt:  SGGEECAICLCVYEEGE-RKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSV

AT4G30370.1 RING/U-box superfamily protein4.8e-0829.1Show/hide
Query:  RTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIF------FRSRAGESAAVETEMTPAPARVKCV--FVETTDFRCSGGEECAICLCVYEEGERKWV-
        + L +F +GL +     TA +  L  L + FF   +      +R R       E     +P  VK +  F         GG++C +C+  + +G+  W  
Subjt:  RTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIF------FRSRAGESAAVETEMTPAPARVKCV--FVETTDFRCSGGEECAICLCVYEEGERKWV-

Query:  KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF
        K+ +CGH+FHR+C+  WL     CP+CR  V  F
Subjt:  KMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTCTTGGAGCATCAGTTAGGTTTCCGTCAACGTTATCTTCGGAGGCGCCGTTAGACGCCGTGAACCGAACTCTGTTAGATTTCGATTTAGGACTCCCAATTAA
CCGGGAGTTGAAGACTGCGATGGTCATGTTCCTCGCCTGCCTTCTCTACCTCTTCTTCGTTCTCATCTTCTTCAGAAGCAGGGCCGGAGAATCGGCGGCGGTGGAGACGG
AGATGACGCCGGCCCCGGCGCGGGTAAAGTGCGTGTTCGTGGAGACGACGGATTTCAGGTGCAGCGGCGGCGAAGAATGTGCGATTTGCTTGTGCGTATATGAAGAAGGG
GAGAGGAAGTGGGTGAAGATGAGTAAATGCGGCCATATATTTCACCGCCGATGTATCAAGGGGTGGCTGAAGGTCGGCCGCCGCTGCCCGCTTTGCCGGAGCTCTGTTTC
CGTCTTCGTCCGCTGTGGAAACACCGCCCTCCCTCCGGCTTCGACTTCGACATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTCTTGGAGCATCAGTTAGGTTTCCGTCAACGTTATCTTCGGAGGCGCCGTTAGACGCCGTGAACCGAACTCTGTTAGATTTCGATTTAGGACTCCCAATTAA
CCGGGAGTTGAAGACTGCGATGGTCATGTTCCTCGCCTGCCTTCTCTACCTCTTCTTCGTTCTCATCTTCTTCAGAAGCAGGGCCGGAGAATCGGCGGCGGTGGAGACGG
AGATGACGCCGGCCCCGGCGCGGGTAAAGTGCGTGTTCGTGGAGACGACGGATTTCAGGTGCAGCGGCGGCGAAGAATGTGCGATTTGCTTGTGCGTATATGAAGAAGGG
GAGAGGAAGTGGGTGAAGATGAGTAAATGCGGCCATATATTTCACCGCCGATGTATCAAGGGGTGGCTGAAGGTCGGCCGCCGCTGCCCGCTTTGCCGGAGCTCTGTTTC
CGTCTTCGTCCGCTGTGGAAACACCGCCCTCCCTCCGGCTTCGACTTCGACATTTTAA
Protein sequenceShow/hide protein sequence
MSILGASVRFPSTLSSEAPLDAVNRTLLDFDLGLPINRELKTAMVMFLACLLYLFFVLIFFRSRAGESAAVETEMTPAPARVKCVFVETTDFRCSGGEECAICLCVYEEG
ERKWVKMSKCGHIFHRRCIKGWLKVGRRCPLCRSSVSVFVRCGNTALPPASTSTF