; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04740 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04740
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:3541741..3544109
RNA-Seq ExpressionMoc03g04740
SyntenyMoc03g04740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]1.3e-4853.42Show/hide
Query:  MHSRVRTMEEMYNEMMRA--NRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASR
        M +++ TME+MY+EM++A   R+ S ++V   +D+ E R     P    +     EGG        +D E         Y+ +  D+++HL ++K+ +S 
Subjt:  MHSRVRTMEEMYNEMMRA--NRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASR

Query:  GPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPK
          G SPSCS  + NS+ +A+S Y P+T E VIT EEFD +K+KFD QV+AL  KCE+KES FDDGD+ ESPFTSDILEALIP KFK P MKPYDGSKDPK
Subjt:  GPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPK

Query:  DYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        DYVEVFEGLM+FQAA++AIKCR FQIALT SARL
Subjt:  DYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]4.6e-5971.51Show/hide
Query:  NIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPF
        +I   + EPI +  GV YSLRD+D++KHL DKKKKAS  P  S S S+E+SNS+LKAQSKY PL  E VI  EEFDLMK++FDEQV+AL  +CE+KESPF
Subjt:  NIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPF

Query:  DDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        DD D+ ESPFTSDI+EA IPPKFK P MKPYDGSKDPKDYVEVFEGLM+FQAA++AIKC AFQIALT SARL
Subjt:  DDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]2.2e-4549.79Show/hide
Query:  LDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKAS
        ++ M +++RTMEEMYN+M++    G+ S+   GD +    ED H            E GD   +   ++H                D++ HL  K+  + 
Subjt:  LDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKAS

Query:  RGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDP
        RG   S   +  + NS+ +A+S Y P+  E VIT EEF+ +K+KFD QV+AL  +CE+KES FDDGD+ ESPFTSDILEA IPPKFK P MK YDGSKDP
Subjt:  RGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDP

Query:  KDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        KDYVEVFEGLM+FQAA++AIKCRAFQIALT SARL
Subjt:  KDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]6.3e-4875.36Show/hide
Query:  KASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGS
        +ASR    SPS S+E+SNSD KAQSKY PLT E VIT EEFDLMK++FDEQV+AL  KCE+KE  FDDGD+ ESPFTSDILE  IPPKFK P MK YD S
Subjt:  KASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGS

Query:  KDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        KDPKDYVEVFEGLM+FQAA++AIKC AFQIALT SARL
Subjt:  KDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]6.0e-5949.83Show/hide
Query:  MTEEQARVGQEVEPPWRSTRNANTILPPAHPRPNKTNRGRGGASRKTSRRATPAADPEVLVTLQRELDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGD
        + E Q   G   EP  RS R     L PAHP+P K NRGRGGASR+T+  A PA   E    LQ+E++ M +++ TMEEMYNEM++A   GS S+     
Subjt:  MTEEQARVGQEVEPPWRSTRNANTILPPAHPRPNKTNRGRGGASRKTSRRATPAADPEVLVTLQRELDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGD

Query:  DLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVIT
        D                     E GD                      LRDH      + +K+ +S   G SPSCS  + NS+ +A+S Y P+  E VIT
Subjt:  DLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVIT

Query:  SEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESAR
         EEFD +K+KFD QV+ L  +CE K S FDDGD+ ESPFTSDILEALIP KFK P MKPYDGSKDPKDYVEVFEGLM FQAA++AIK RAFQIALT SAR
Subjt:  SEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESAR

Query:  L
        L
Subjt:  L

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196346.1e-4953.42Show/hide
Query:  MHSRVRTMEEMYNEMMRA--NRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASR
        M +++ TME+MY+EM++A   R+ S ++V   +D+ E R     P    +     EGG        +D E         Y+ +  D+++HL ++K+ +S 
Subjt:  MHSRVRTMEEMYNEMMRA--NRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASR

Query:  GPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPK
          G SPSCS  + NS+ +A+S Y P+T E VIT EEFD +K+KFD QV+AL  KCE+KES FDDGD+ ESPFTSDILEALIP KFK P MKPYDGSKDPK
Subjt:  GPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPK

Query:  DYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        DYVEVFEGLM+FQAA++AIKCR FQIALT SARL
Subjt:  DYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

A0A6J1DPC9 uncharacterized protein LOC1110222802.2e-5971.51Show/hide
Query:  NIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPF
        +I   + EPI +  GV YSLRD+D++KHL DKKKKAS  P  S S S+E+SNS+LKAQSKY PL  E VI  EEFDLMK++FDEQV+AL  +CE+KESPF
Subjt:  NIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPF

Query:  DDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        DD D+ ESPFTSDI+EA IPPKFK P MKPYDGSKDPKDYVEVFEGLM+FQAA++AIKC AFQIALT SARL
Subjt:  DDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

A0A6J1DPN4 uncharacterized protein LOC1110230601.1e-4549.79Show/hide
Query:  LDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKAS
        ++ M +++RTMEEMYN+M++    G+ S+   GD +    ED H            E GD   +   ++H                D++ HL  K+  + 
Subjt:  LDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGDDLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKAS

Query:  RGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDP
        RG   S   +  + NS+ +A+S Y P+  E VIT EEF+ +K+KFD QV+AL  +CE+KES FDDGD+ ESPFTSDILEA IPPKFK P MK YDGSKDP
Subjt:  RGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDP

Query:  KDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        KDYVEVFEGLM+FQAA++AIKCRAFQIALT SARL
Subjt:  KDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

A0A6J1DVR0 uncharacterized protein LOC1110245033.0e-4875.36Show/hide
Query:  KASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGS
        +ASR    SPS S+E+SNSD KAQSKY PLT E VIT EEFDLMK++FDEQV+AL  KCE+KE  FDDGD+ ESPFTSDILE  IPPKFK P MK YD S
Subjt:  KASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGS

Query:  KDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL
        KDPKDYVEVFEGLM+FQAA++AIKC AFQIALT SARL
Subjt:  KDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL

A0A6J1DZJ1 uncharacterized protein LOC1110257382.9e-5949.83Show/hide
Query:  MTEEQARVGQEVEPPWRSTRNANTILPPAHPRPNKTNRGRGGASRKTSRRATPAADPEVLVTLQRELDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGD
        + E Q   G   EP  RS R     L PAHP+P K NRGRGGASR+T+  A PA   E    LQ+E++ M +++ TMEEMYNEM++A   GS S+     
Subjt:  MTEEQARVGQEVEPPWRSTRNANTILPPAHPRPNKTNRGRGGASRKTSRRATPAADPEVLVTLQRELDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGD

Query:  DLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVIT
        D                     E GD                      LRDH      + +K+ +S   G SPSCS  + NS+ +A+S Y P+  E VIT
Subjt:  DLPEGREDQHPPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVIT

Query:  SEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESAR
         EEFD +K+KFD QV+ L  +CE K S FDDGD+ ESPFTSDILEALIP KFK P MKPYDGSKDPKDYVEVFEGLM FQAA++AIK RAFQIALT SAR
Subjt:  SEEFDLMKNKFDEQVKALSTKCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESAR

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAAGAACAGGCTAGGGTAGGGCAAGAGGTGGAGCCACCTTGGAGGTCCACCCGCAATGCCAATACTATCCTGCCACCGGCACATCCGAGGCCCAACAAGACCAA
CAGAGGTCGAGGTGGGGCCTCAAGAAAGACCTCTCGAAGGGCCACACCAGCCGCGGACCCTGAAGTTCTTGTAACCCTCCAGCGGGAATTAGATGACATGCACAGTCGAG
TGCGCACCATGGAGGAGATGTATAATGAGATGATGCGGGCGAACCGAACTGGATCTCACTCAAAAGTTCCAGGCGGAGATGACCTACCGGAGGGAAGGGAAGATCAACAT
CCACCCCTCCATTGTTGGATCGGTATGACAACCCTAGAGGGGGGGGACCAAAAAGCCAACATCCATCACGACGATCACGAGCCCATCGTTGATAGTGTGGGAGTTTACTA
TAGCCTCAGAGATCATGATGTCAAGAAGCACCTCGTCGACAAGAAGAAGAAGGCCTCACGAGGCCCAGGGATCTCCCCATCGTGCTCCCAAGAATACTCAAACTCCGACC
TTAAAGCCCAGTCGAAGTATACTCCGTTGACGCTGGAGGTCGTCATAACGAGTGAGGAGTTCGACCTAATGAAAAACAAGTTTGACGAACAGGTCAAGGCACTTAGCACG
AAGTGCGAAAGGAAAGAAAGTCCTTTTGATGACGGCGATATGAGCGAATCGCCGTTCACCTCGGACATTTTGGAGGCCCTTATTCCTCCAAAGTTCAAGATGCCTGCCAT
GAAGCCCTATGACGGGTCTAAGGACCCAAAGGACTATGTGGAAGTCTTTGAGGGCCTCATGGAATTTCAAGCGGCCTCAAATGCCATAAAGTGCCGAGCCTTTCAGATCG
CTCTCACGGAGAGTGCTCGGCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGAAGAACAGGCTAGGGTAGGGCAAGAGGTGGAGCCACCTTGGAGGTCCACCCGCAATGCCAATACTATCCTGCCACCGGCACATCCGAGGCCCAACAAGACCAA
CAGAGGTCGAGGTGGGGCCTCAAGAAAGACCTCTCGAAGGGCCACACCAGCCGCGGACCCTGAAGTTCTTGTAACCCTCCAGCGGGAATTAGATGACATGCACAGTCGAG
TGCGCACCATGGAGGAGATGTATAATGAGATGATGCGGGCGAACCGAACTGGATCTCACTCAAAAGTTCCAGGCGGAGATGACCTACCGGAGGGAAGGGAAGATCAACAT
CCACCCCTCCATTGTTGGATCGGTATGACAACCCTAGAGGGGGGGGACCAAAAAGCCAACATCCATCACGACGATCACGAGCCCATCGTTGATAGTGTGGGAGTTTACTA
TAGCCTCAGAGATCATGATGTCAAGAAGCACCTCGTCGACAAGAAGAAGAAGGCCTCACGAGGCCCAGGGATCTCCCCATCGTGCTCCCAAGAATACTCAAACTCCGACC
TTAAAGCCCAGTCGAAGTATACTCCGTTGACGCTGGAGGTCGTCATAACGAGTGAGGAGTTCGACCTAATGAAAAACAAGTTTGACGAACAGGTCAAGGCACTTAGCACG
AAGTGCGAAAGGAAAGAAAGTCCTTTTGATGACGGCGATATGAGCGAATCGCCGTTCACCTCGGACATTTTGGAGGCCCTTATTCCTCCAAAGTTCAAGATGCCTGCCAT
GAAGCCCTATGACGGGTCTAAGGACCCAAAGGACTATGTGGAAGTCTTTGAGGGCCTCATGGAATTTCAAGCGGCCTCAAATGCCATAAAGTGCCGAGCCTTTCAGATCG
CTCTCACGGAGAGTGCTCGGCTCTAG
Protein sequenceShow/hide protein sequence
MTEEQARVGQEVEPPWRSTRNANTILPPAHPRPNKTNRGRGGASRKTSRRATPAADPEVLVTLQRELDDMHSRVRTMEEMYNEMMRANRTGSHSKVPGGDDLPEGREDQH
PPLHCWIGMTTLEGGDQKANIHHDDHEPIVDSVGVYYSLRDHDVKKHLVDKKKKASRGPGISPSCSQEYSNSDLKAQSKYTPLTLEVVITSEEFDLMKNKFDEQVKALST
KCERKESPFDDGDMSESPFTSDILEALIPPKFKMPAMKPYDGSKDPKDYVEVFEGLMEFQAASNAIKCRAFQIALTESARL