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Moc03g04750 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04750
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr3:3548534..3548986
RNA-Seq ExpressionMoc03g04750
SyntenyMoc03g04750
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155478.1 RING-H2 finger protein ATL1-like [Momordica charantia]8.3e-1743.85Show/hide
Query:  DAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG---ECVICLCGYEEGEK-WLKMKCGHIFHRSCIERW
        D  FA+    V+F  ILY++  + C K R     L  TA       ++  +  EAS FT GGG    ECVICL  +++GEK W+  KC H+FHR+CI+RW
Subjt:  DAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG---ECVICLCGYEEGEK-WLKMKCGHIFHRSCIERW

Query:  LMVGRHCPLCRSCLSAVVVHCGGATVPQIP
        L   RHCPLCRSC+  V VH G   +   P
Subjt:  LMVGRHCPLCRSCLSAVVVHCGGATVPQIP

XP_022158250.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]3.2e-1640.85Show/hide
Query:  VDDAIFALP-------VAIVLFICILYYVVQTLCCK--EREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG----ECVICLCGYEEGEKWLKM-KC
        V   +F LP       VA +  + ++       C +   R   E LPV    + +  ++     +AS+F+ GGGG    EC ICL  +EEGEK  KM +C
Subjt:  VDDAIFALP-------VAIVLFICILYYVVQTLCCK--EREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG----ECVICLCGYEEGEKWLKM-KC

Query:  GHIFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIP
        GHIFHR+CI+RWL V RHCPLCR C+  +VVH     VP  P
Subjt:  GHIFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIP

XP_022158252.1 E3 ubiquitin-protein ligase RHA2B-like [Momordica charantia]3.9e-83100Show/hide
Query:  MSELSPQPPLDAVDDAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGH
        MSELSPQPPLDAVDDAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGH
Subjt:  MSELSPQPPLDAVDDAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGH

Query:  IFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIPQMSDLRRIRT
        IFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIPQMSDLRRIRT
Subjt:  IFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIPQMSDLRRIRT

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]2.9e-1748.28Show/hide
Query:  LPVAIVLFICILYYVVQTLCCKEREAGE----ILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVG
        L +  + F+ ILY ++      E E+G      LPV   PEIV  +I   +F   E   G   EC ICL  +E+G+K  KM KCGHIFHR CI+RWL V 
Subjt:  LPVAIVLFICILYYVVQTLCCKEREAGE----ILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVG

Query:  RHCPLCRSCLSAVVVH
        RHCPLCRSC+  VVVH
Subjt:  RHCPLCRSCLSAVVVH

XP_023524567.1 RING-H2 finger protein ATL56-like [Cucurbita pepo subsp. pepo]4.9e-1748.28Show/hide
Query:  LPVAIVLFICILYYVVQTLCCKEREAGE----ILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVG
        L V  + F+ ILY ++      E E+G      LPV   PEIV  +I   +F   E   G   EC ICL  +E+ +K  KM KCGHIFHR CI+RWL V 
Subjt:  LPVAIVLFICILYYVVQTLCCKEREAGE----ILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVG

Query:  RHCPLCRSCLSAVVVH
        RHCPLCRSC+  VVVH
Subjt:  RHCPLCRSCLSAVVVH

TrEMBL top hitse value%identityAlignment
A0A6J1DN25 RING-H2 finger protein ATL1-like4.0e-1743.85Show/hide
Query:  DAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG---ECVICLCGYEEGEK-WLKMKCGHIFHRSCIERW
        D  FA+    V+F  ILY++  + C K R     L  TA       ++  +  EAS FT GGG    ECVICL  +++GEK W+  KC H+FHR+CI+RW
Subjt:  DAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG---ECVICLCGYEEGEK-WLKMKCGHIFHRSCIERW

Query:  LMVGRHCPLCRSCLSAVVVHCGGATVPQIP
        L   RHCPLCRSC+  V VH G   +   P
Subjt:  LMVGRHCPLCRSCLSAVVVHCGGATVPQIP

A0A6J1DVB5 RING-type E3 ubiquitin transferase1.5e-1640.85Show/hide
Query:  VDDAIFALP-------VAIVLFICILYYVVQTLCCK--EREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG----ECVICLCGYEEGEKWLKM-KC
        V   +F LP       VA +  + ++       C +   R   E LPV    + +  ++     +AS+F+ GGGG    EC ICL  +EEGEK  KM +C
Subjt:  VDDAIFALP-------VAIVLFICILYYVVQTLCCK--EREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG----ECVICLCGYEEGEKWLKM-KC

Query:  GHIFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIP
        GHIFHR+CI+RWL V RHCPLCR C+  +VVH     VP  P
Subjt:  GHIFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIP

A0A6J1DWR6 E3 ubiquitin-protein ligase RHA2B-like1.9e-83100Show/hide
Query:  MSELSPQPPLDAVDDAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGH
        MSELSPQPPLDAVDDAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGH
Subjt:  MSELSPQPPLDAVDDAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGH

Query:  IFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIPQMSDLRRIRT
        IFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIPQMSDLRRIRT
Subjt:  IFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVPQIPQMSDLRRIRT

A0A6J1E0E9 RING-H2 finger protein ATL1-like9.9e-1640Show/hide
Query:  SELSPQP-PLDAVDDAIF-------------ALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG----ECVIC
        S LSP P PL+AV  ++F             A+ + ++L++ IL  ++   C      GE+      PE +P   + L  EA  F  GG G    EC IC
Subjt:  SELSPQP-PLDAVDDAIF-------------ALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGG----ECVIC

Query:  LCGYEEGEKWLKM-KCGHIFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVP
        L  +E+GEK  KM KC H+FHR CI+RWL   RHCPLCR+ +  +VVH G   VP
Subjt:  LCGYEEGEKWLKM-KCGHIFHRSCIERWLMVGRHCPLCRSCLSAVVVHCGGATVP

A0A6J1KAT3 RING-type E3 ubiquitin transferase1.4e-1748.28Show/hide
Query:  LPVAIVLFICILYYVVQTLCCKEREAGE----ILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVG
        L +  + F+ ILY ++      E E+G      LPV   PEIV  +I   +F   E   G   EC ICL  +E+G+K  KM KCGHIFHR CI+RWL V 
Subjt:  LPVAIVLFICILYYVVQTLCCKEREAGE----ILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVG

Query:  RHCPLCRSCLSAVVVH
        RHCPLCRSC+  VVVH
Subjt:  RHCPLCRSCLSAVVVH

SwissProt top hitse value%identityAlignment
Q8GUU2 E3 ubiquitin protein ligase RIE11.1e-0831.9Show/hide
Query:  ALPVAIVLFICILYYVVQTLCCKEREAGEILP-------------VTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGHIFHRS
        AL   +   I +LY V  T    E E G +LP             +T P ++VP  I  L             +C ICL  YE+G +   + C H FH +
Subjt:  ALPVAIVLFICILYYVVQTLCCKEREAGEILP-------------VTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGHIFHRS

Query:  CIERWLMVGRHCPLCR
        CI +WL +   CPLC+
Subjt:  CIERWLMVGRHCPLCR

Q93Z92 E3 ubiquitin-protein ligase At4g116802.5e-0848.84Show/hide
Query:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR
        EC ICLC YE+G +  ++ C H FH +CI++WL +   CPLC+
Subjt:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR

Q9LN71 E3 ubiquitin-protein ligase At1g127602.5e-0848.84Show/hide
Query:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR
        EC ICL  YE+G +  ++ CGH FH SC+++WL +   CPLC+
Subjt:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR

Q9M0C3 RING-H2 finger protein ATL142.5e-0844.68Show/hide
Query:  GGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVGRHCPLCR
        GG +CV+C+ G+ +G+   K+ +CGH+FHR C++ WL+    CP+CR
Subjt:  GGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVGRHCPLCR

Q9ZT50 E3 ubiquitin-protein ligase RHA2A2.3e-0950.98Show/hide
Query:  GGGGECVICLCGYEEGEKWLKMKCGHIFHRSCIERWL-MVGRHCPLCRSCL
        GGG +CV+CL   +EGE+  K++C H+FH+ C+E WL      CPLCRS L
Subjt:  GGGGECVICLCGYEEGEKWLKMKCGHIFHRSCIERWL-MVGRHCPLCRSCL

Arabidopsis top hitse value%identityAlignment
AT1G12760.1 Zinc finger, C3HC4 type (RING finger) family protein1.8e-0948.84Show/hide
Query:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR
        EC ICL  YE+G +  ++ CGH FH SC+++WL +   CPLC+
Subjt:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR

AT1G12760.2 Zinc finger, C3HC4 type (RING finger) family protein1.8e-0948.84Show/hide
Query:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR
        EC ICL  YE+G +  ++ CGH FH SC+++WL +   CPLC+
Subjt:  ECVICLCGYEEGEKWLKMKCGHIFHRSCIERWLMVGRHCPLCR

AT1G15100.1 RING-H2 finger A2A1.6e-1050.98Show/hide
Query:  GGGGECVICLCGYEEGEKWLKMKCGHIFHRSCIERWL-MVGRHCPLCRSCL
        GGG +CV+CL   +EGE+  K++C H+FH+ C+E WL      CPLCRS L
Subjt:  GGGGECVICLCGYEEGEKWLKMKCGHIFHRSCIERWL-MVGRHCPLCRSCL

AT2G01735.1 RING-finger protein for embryogenesis8.0e-1031.9Show/hide
Query:  ALPVAIVLFICILYYVVQTLCCKEREAGEILP-------------VTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGHIFHRS
        AL   +   I +LY V  T    E E G +LP             +T P ++VP  I  L             +C ICL  YE+G +   + C H FH +
Subjt:  ALPVAIVLFICILYYVVQTLCCKEREAGEILP-------------VTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGHIFHRS

Query:  CIERWLMVGRHCPLCR
        CI +WL +   CPLC+
Subjt:  CIERWLMVGRHCPLCR

AT4G30370.1 RING/U-box superfamily protein1.8e-0944.68Show/hide
Query:  GGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVGRHCPLCR
        GG +CV+C+ G+ +G+   K+ +CGH+FHR C++ WL+    CP+CR
Subjt:  GGGECVICLCGYEEGEKWLKM-KCGHIFHRSCIERWLMVGRHCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAATTATCTCCACAGCCGCCGCTTGACGCCGTCGACGACGCTATCTTTGCACTTCCGGTTGCCATCGTCCTCTTTATTTGTATACTCTACTACGTGGTTCAAAC
CCTTTGTTGTAAAGAACGGGAAGCTGGAGAAATATTGCCGGTGACGGCGCCGCCGGAGATCGTACCGGCACAGATAAGGCCCCTGTTATTTGAGGCCTCGGAGTTCACTG
ACGGCGGCGGCGGCGAATGTGTGATTTGCCTGTGCGGATATGAAGAAGGGGAGAAGTGGCTGAAGATGAAGTGCGGCCATATATTTCACCGGAGCTGTATTGAGCGGTGG
CTGATGGTGGGCCGCCACTGCCCGCTTTGCCGGAGCTGCCTTTCCGCCGTCGTCGTCCACTGCGGAGGCGCCACCGTCCCTCAAATTCCCCAAATGTCTGATCTCCGGAG
AATACGAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAATTATCTCCACAGCCGCCGCTTGACGCCGTCGACGACGCTATCTTTGCACTTCCGGTTGCCATCGTCCTCTTTATTTGTATACTCTACTACGTGGTTCAAAC
CCTTTGTTGTAAAGAACGGGAAGCTGGAGAAATATTGCCGGTGACGGCGCCGCCGGAGATCGTACCGGCACAGATAAGGCCCCTGTTATTTGAGGCCTCGGAGTTCACTG
ACGGCGGCGGCGGCGAATGTGTGATTTGCCTGTGCGGATATGAAGAAGGGGAGAAGTGGCTGAAGATGAAGTGCGGCCATATATTTCACCGGAGCTGTATTGAGCGGTGG
CTGATGGTGGGCCGCCACTGCCCGCTTTGCCGGAGCTGCCTTTCCGCCGTCGTCGTCCACTGCGGAGGCGCCACCGTCCCTCAAATTCCCCAAATGTCTGATCTCCGGAG
AATACGAACATGA
Protein sequenceShow/hide protein sequence
MSELSPQPPLDAVDDAIFALPVAIVLFICILYYVVQTLCCKEREAGEILPVTAPPEIVPAQIRPLLFEASEFTDGGGGECVICLCGYEEGEKWLKMKCGHIFHRSCIERW
LMVGRHCPLCRSCLSAVVVHCGGATVPQIPQMSDLRRIRT