; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04760 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04760
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-H2 finger protein ATL1-like
Genome locationchr3:3550665..3551135
RNA-Seq ExpressionMoc03g04760
SyntenyMoc03g04760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067739.1 RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa]9.8e-2947.65Show/hide
Query:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS
        MSSP   PS+L  PP PL  +  S+   LP+ ++ L +++M LL     F+L L++   CG    +  E    K L I+A +F YG  GDD++ECAICL 
Subjt:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS

Query:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDN
        + E+GEKCRKM  C H FH+DCIDRW   E HCPLCRTS+C+VV   +N
Subjt:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDN

XP_008457567.1 PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo]9.8e-2947.68Show/hide
Query:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS
        MSSP   P +L  PP PL  +   +   LP+ ++ L +++MFLL++L + I  L     CG    +  E    K L I+APIF YG  GDD++ECAICL 
Subjt:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS

Query:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIV
        + E+GEKCRKM  C H FH+DCIDRW   E HCPLCRTS C+VV   +N++
Subjt:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIV

XP_011659772.1 RING-H2 finger protein ATL39 [Cucumis sativus]3.6e-3155Show/hide
Query:  LSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRK
        LSP P+P     HSL   LP  +  L  V M LL++L+ FIL L   RS  S+G ELPE      L IEAPIF Y G   D++ECAICL + E+GEKCRK
Subjt:  LSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRK

Query:  MSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVV--HGGD
        M  C HVFH+DCIDRW K + HCP+CRTS+C+VV  HGG+
Subjt:  MSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVV--HGGD

XP_022158250.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]2.8e-3147.89Show/hide
Query:  PPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELP--EALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRK
        P     + VS +LFG LP++ + L V +MF++ ++ +F +R    RS       LP  +   +  ++++A  F++GG GDDD+ECAICL +FE+GEKCRK
Subjt:  PPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELP--EALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRK

Query:  MSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP
        MS+C H+FHR+CIDRWL+ ERHCPLCR  +CIVVH  + +VP
Subjt:  MSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP

XP_022158251.1 RING-H2 finger protein ATL1-like [Momordica charantia]3.3e-85100Show/hide
Query:  MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKF
        MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKF
Subjt:  MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKF

Query:  EQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA
        EQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA
Subjt:  EQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA

TrEMBL top hitse value%identityAlignment
A0A0A0K790 RING-type domain-containing protein1.3e-3153.33Show/hide
Query:  MSSPP--PSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS
        MSSP   PS++   P P+ ++ HSL   LP  +  L  V M LL++L+ FIL L   RS  S+G ELPE      L IEAPIF Y G   D++ECAICL 
Subjt:  MSSPP--PSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS

Query:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVV--HGGD
        + E+GEKCRKM  C HVFH+DCIDRW K + HCP+CRTS+C+VV  HGG+
Subjt:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVV--HGGD

A0A5A7VRG5 RING-type E3 ubiquitin transferase4.8e-2947.65Show/hide
Query:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS
        MSSP   PS+L  PP PL  +  S+   LP+ ++ L +++M LL     F+L L++   CG    +  E    K L I+A +F YG  GDD++ECAICL 
Subjt:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS

Query:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDN
        + E+GEKCRKM  C H FH+DCIDRW   E HCPLCRTS+C+VV   +N
Subjt:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDN

A0A5D3BG26 RING-type E3 ubiquitin transferase4.8e-2947.68Show/hide
Query:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS
        MSSP   P +L  PP PL  +   +   LP+ ++ L +++MFLL++L + I  L     CG    +  E    K L I+APIF YG  GDD++ECAICL 
Subjt:  MSSP--PPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLS

Query:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIV
        + E+GEKCRKM  C H FH+DCIDRW   E HCPLCRTS C+VV   +N++
Subjt:  KFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIV

A0A6J1DVB5 RING-type E3 ubiquitin transferase1.3e-3147.89Show/hide
Query:  PPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELP--EALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRK
        P     + VS +LFG LP++ + L V +MF++ ++ +F +R    RS       LP  +   +  ++++A  F++GG GDDD+ECAICL +FE+GEKCRK
Subjt:  PPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELP--EALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRK

Query:  MSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP
        MS+C H+FHR+CIDRWL+ ERHCPLCR  +CIVVH  + +VP
Subjt:  MSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP

A0A6J1E0E9 RING-H2 finger protein ATL1-like1.6e-85100Show/hide
Query:  MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKF
        MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKF
Subjt:  MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKF

Query:  EQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA
        EQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA
Subjt:  EQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL15.1e-1231.46Show/hide
Query:  PPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILD-----------RSCGSN------GGELPEALPQKRLQIEAPIFAYGG-
        PP +  + P  P  + S + F  L   V I  +   FLLV  Y+F+++  L+           RS   N        E+   L +  ++   P+F +   
Subjt:  PPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILD-----------RSCGSN------GGELPEALPQKRLQIEAPIFAYGG-

Query:  ---SGDDD-----EECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI-CIVVHGGDNIVPPAVP
           +G++D     +EC++CL++F++ EK R +  C HVFH DCID WL+   +CPLCRTS+ C      D I  P+ P
Subjt:  ---SGDDD-----EECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI-CIVVHGGDNIVPPAVP

Q8RXX9 E3 ubiquitin-protein ligase ATL61.7e-1248.44Show/hide
Query:  GDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP
        G  + ECAICL++FE  E  R + KCDHVFH  CID WL+A   CP+CR ++   V  G+++ P
Subjt:  GDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP

Q9LRB7 E3 ubiquitin-protein ligase EL55.1e-1234.09Show/hide
Query:  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDE------ECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICI
        G+ GG  PE L    + + +   A   + +++E      ECA+CL++ E GE+ R + +C H FH +C+D WL +   CPLCR ++ +
Subjt:  GSNGGELPEALPQKRLQIEAPIFAYGGSGDDDE------ECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICI

Q9P7E1 Uncharacterized RING finger protein P4H10.078.4e-1544.74Show/hide
Query:  GGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWL-KAERHCPLCRT
        G E P    QK L+    +F + G+   DE C +CLS FE  ++CR++ +C+H FHR+CID+WL  ++  CPLCRT
Subjt:  GGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWL-KAERHCPLCRT

Q9SRM0 RING-H2 finger protein ATL662.3e-1252.94Show/hide
Query:  DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI
        ++++EC ICL  FE+GEK + +  C H +H +C+DRWLK E  CPLCR SI
Subjt:  DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein3.6e-1331.46Show/hide
Query:  PPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILD-----------RSCGSN------GGELPEALPQKRLQIEAPIFAYGG-
        PP +  + P  P  + S + F  L   V I  +   FLLV  Y+F+++  L+           RS   N        E+   L +  ++   P+F +   
Subjt:  PPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILD-----------RSCGSN------GGELPEALPQKRLQIEAPIFAYGG-

Query:  ---SGDDD-----EECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI-CIVVHGGDNIVPPAVP
           +G++D     +EC++CL++F++ EK R +  C HVFH DCID WL+   +CPLCRTS+ C      D I  P+ P
Subjt:  ---SGDDD-----EECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI-CIVVHGGDNIVPPAVP

AT2G47560.1 RING/U-box superfamily protein3.6e-1342.11Show/hide
Query:  EALPQKRLQIEAPIFAYGGSG----DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI
        +AL Q  L  + PIF Y        ++ EEC++CLS+FE+ ++ R + KC H FH DCID W ++   CPLCR  +
Subjt:  EALPQKRLQIEAPIFAYGGSG----DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI

AT3G05200.1 RING/U-box superfamily protein1.2e-1348.44Show/hide
Query:  GDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP
        G  + ECAICL++FE  E  R + KCDHVFH  CID WL+A   CP+CR ++   V  G+++ P
Subjt:  GDDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVP

AT3G11110.1 RING/U-box superfamily protein1.6e-1352.94Show/hide
Query:  DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI
        ++++EC ICL  FE+GEK + +  C H +H +C+DRWLK E  CPLCR SI
Subjt:  DDDEECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI

AT3G62690.1 AtL54.7e-1346.77Show/hide
Query:  PIFAYGGSGDDD--EECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI
        PIF Y     +   EEC++CLS+FE+ ++ R + KC HVFH DCID W ++   CPLCR  +
Subjt:  PIFAYGGSGDDD--EECAICLSKFEQGEKCRKMSKCDHVFHRDCIDRWLKAERHCPLCRTSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCGCCGCCACCGTCAGTGTTATCTCCGCCGCCGATGCCGTTAAACGCCGTCAGCCACAGTCTCTTTGGGGAATTGCCAAAACACGTTCAGATTTTGTGTGTGGT
TGCTATGTTCCTCCTCGTTATACTCTACGTCTTCATTCTCAGGCTCATTCTCGACAGAAGCTGCGGATCCAACGGCGGAGAATTGCCGGAGGCGTTACCGCAGAAGAGGT
TGCAGATTGAAGCTCCGATTTTCGCTTACGGCGGATCGGGCGACGACGACGAAGAATGTGCAATTTGCCTTAGCAAATTTGAACAAGGAGAGAAGTGCCGCAAAATGAGT
AAGTGCGACCACGTGTTTCACCGGGACTGTATTGACCGGTGGCTGAAGGCGGAGCGCCACTGCCCGCTTTGCCGGACCAGTATTTGCATCGTCGTTCACGGTGGAGACAA
CATCGTCCCTCCAGCCGTCCCAAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCGCCGCCACCGTCAGTGTTATCTCCGCCGCCGATGCCGTTAAACGCCGTCAGCCACAGTCTCTTTGGGGAATTGCCAAAACACGTTCAGATTTTGTGTGTGGT
TGCTATGTTCCTCCTCGTTATACTCTACGTCTTCATTCTCAGGCTCATTCTCGACAGAAGCTGCGGATCCAACGGCGGAGAATTGCCGGAGGCGTTACCGCAGAAGAGGT
TGCAGATTGAAGCTCCGATTTTCGCTTACGGCGGATCGGGCGACGACGACGAAGAATGTGCAATTTGCCTTAGCAAATTTGAACAAGGAGAGAAGTGCCGCAAAATGAGT
AAGTGCGACCACGTGTTTCACCGGGACTGTATTGACCGGTGGCTGAAGGCGGAGCGCCACTGCCCGCTTTGCCGGACCAGTATTTGCATCGTCGTTCACGGTGGAGACAA
CATCGTCCCTCCAGCCGTCCCAAATGCTTGA
Protein sequenceShow/hide protein sequence
MSSPPPSVLSPPPMPLNAVSHSLFGELPKHVQILCVVAMFLLVILYVFILRLILDRSCGSNGGELPEALPQKRLQIEAPIFAYGGSGDDDEECAICLSKFEQGEKCRKMS
KCDHVFHRDCIDRWLKAERHCPLCRTSICIVVHGGDNIVPPAVPNA