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Moc03g04770 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04770
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr3:3554302..3554760
RNA-Seq ExpressionMoc03g04770
SyntenyMoc03g04770
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067740.1 RING-H2 finger protein ATL63-like [Cucumis melo var. makuwa]4.9e-2547.66Show/hide
Query:  LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRW
        LP+  E L + SMF++ V+ L     C +RS + +       ++E    + +QAS F +G  GDD  ECAICL E EEGEKCRKM  CGH+FH++CIDRW
Subjt:  LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRW

Query:  LRVERHCPLCRGCVCIVVHDANTVVPST
          VE HCPLCR  VC+VV  +  V+ S+
Subjt:  LRVERHCPLCRGCVCIVVHDANTVVPST

XP_022155478.1 RING-H2 finger protein ATL1-like [Momordica charantia]1.9e-2947.13Show/hide
Query:  SSSASVPSTS--SFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAE-----ALPVKDREQEMVVRVQASDFSFGGGGDDDDECAIC
        S +AS PS +  S  GV     GL    EY  V ++ +VF++   A      R +  E       A PV++ E   +VR++AS F+  GGGDD +EC IC
Subjt:  SSSASVPSTS--SFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAE-----ALPVKDREQEMVVRVQASDFSFGGGGDDDDECAIC

Query:  LGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTP
        L EF++GEKC  MS+C H+FHRNCIDRWL+ ERHCPLCR CVC+ VH  N ++ STP
Subjt:  LGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTP

XP_022158250.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]7.2e-85100Show/hide
Query:  MSSSASVPSTSSFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEE
        MSSSASVPSTSSFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEE
Subjt:  MSSSASVPSTSSFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEE

Query:  GEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTPH
        GEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTPH
Subjt:  GEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTPH

XP_022158251.1 RING-H2 finger protein ATL1-like [Momordica charantia]1.6e-3147.89Show/hide
Query:  PSTSSFHGVSQTLFG-LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRK
        P     + VS +LFG LP++ + L V +MF++ ++ +F +R    RS       LP  +   +  ++++A  F++GG GDDD+ECAICL +FE+GEKCRK
Subjt:  PSTSSFHGVSQTLFG-LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRK

Query:  MSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVP
        MS+C H+FHR+CIDRWL+ ERHCPLCR  +CIVVH  + +VP
Subjt:  MSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVP

XP_022998666.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]2.9e-2569.41Show/hide
Query:  AEALPVKDREQEMVVRVQASDFSF-GGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVH
        A ALPV  RE E +VR++AS FS+    G  DDECAICL EFE+G+KCRKM++CGHIFHR CIDRWL+V+RHCPLCR CVC+VVH
Subjt:  AEALPVKDREQEMVVRVQASDFSF-GGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVH

TrEMBL top hitse value%identityAlignment
A0A5A7VKL1 RING-type E3 ubiquitin transferase2.4e-2547.66Show/hide
Query:  LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRW
        LP+  E L + SMF++ V+ L     C +RS + +       ++E    + +QAS F +G  GDD  ECAICL E EEGEKCRKM  CGH+FH++CIDRW
Subjt:  LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRW

Query:  LRVERHCPLCRGCVCIVVHDANTVVPST
          VE HCPLCR  VC+VV  +  V+ S+
Subjt:  LRVERHCPLCRGCVCIVVHDANTVVPST

A0A6J1DN25 RING-H2 finger protein ATL1-like9.3e-3047.13Show/hide
Query:  SSSASVPSTS--SFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAE-----ALPVKDREQEMVVRVQASDFSFGGGGDDDDECAIC
        S +AS PS +  S  GV     GL    EY  V ++ +VF++   A      R +  E       A PV++ E   +VR++AS F+  GGGDD +EC IC
Subjt:  SSSASVPSTS--SFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAE-----ALPVKDREQEMVVRVQASDFSFGGGGDDDDECAIC

Query:  LGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTP
        L EF++GEKC  MS+C H+FHRNCIDRWL+ ERHCPLCR CVC+ VH  N ++ STP
Subjt:  LGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTP

A0A6J1DVB5 RING-type E3 ubiquitin transferase3.5e-85100Show/hide
Query:  MSSSASVPSTSSFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEE
        MSSSASVPSTSSFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEE
Subjt:  MSSSASVPSTSSFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEE

Query:  GEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTPH
        GEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTPH
Subjt:  GEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTPH

A0A6J1E0E9 RING-H2 finger protein ATL1-like7.6e-3247.89Show/hide
Query:  PSTSSFHGVSQTLFG-LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRK
        P     + VS +LFG LP++ + L V +MF++ ++ +F +R    RS       LP  +   +  ++++A  F++GG GDDD+ECAICL +FE+GEKCRK
Subjt:  PSTSSFHGVSQTLFG-LPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRK

Query:  MSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVP
        MS+C H+FHR+CIDRWL+ ERHCPLCR  +CIVVH  + +VP
Subjt:  MSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVP

A0A6J1KAT3 RING-type E3 ubiquitin transferase1.4e-2569.41Show/hide
Query:  AEALPVKDREQEMVVRVQASDFSF-GGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVH
        A ALPV  RE E +VR++AS FS+    G  DDECAICL EFE+G+KCRKM++CGHIFHR CIDRWL+V+RHCPLCR CVC+VVH
Subjt:  AEALPVKDREQEMVVRVQASDFSF-GGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVH

SwissProt top hitse value%identityAlignment
O82353 RING-H2 finger protein ATL671.2e-1051.72Show/hide
Query:  ASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        AS   FGGGG  D  C+ICL E++E E  R M EC H FH  C+D WL++   CP+CR
Subjt:  ASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

Q7XLY8 E3 ubiquitin-protein ligase Os04g05909002.5e-1134.62Show/hide
Query:  PVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIV
        P    ++ ++ ++    +  G G     +C++CLGEF +GE  R +  C H FH+ CID WL+   +CPLCR  +  V
Subjt:  PVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIV

Q9LRB7 E3 ubiquitin-protein ligase EL59.4e-1145.45Show/hide
Query:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTP
        DD  ECA+CL E E+GE+ R +  CGH FH  C+D WL     CPLCR  V +       V P  P
Subjt:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTP

Q9LX93 E3 ubiquitin-protein ligase RING16.5e-1239.24Show/hide
Query:  LPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIV
        +P     +  +  +    F  G G  D  EC++CL EFEE E  R + +C H FH NCID WL   ++CPLCR  V ++
Subjt:  LPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIV

Q9SRM0 RING-H2 finger protein ATL661.4e-1154.17Show/hide
Query:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        +++ EC ICLG FEEGEK + +  C H +H  C+DRWL+ E  CPLCR
Subjt:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

Arabidopsis top hitse value%identityAlignment
AT2G46160.1 RING/U-box superfamily protein8.7e-1251.72Show/hide
Query:  ASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        AS   FGGGG  D  C+ICL E++E E  R M EC H FH  C+D WL++   CP+CR
Subjt:  ASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

AT3G11110.1 RING/U-box superfamily protein1.0e-1254.17Show/hide
Query:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        +++ EC ICLG FEEGEK + +  C H +H  C+DRWL+ E  CPLCR
Subjt:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

AT4G35480.1 RING-H2 finger A3B1.5e-1139.53Show/hide
Query:  NRRSHRPEAEALPVKDREQEMVVRVQASDF--SFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR
        N+   +   +ALP             A D   S  G GD   ECAIC+ EF EGE+ R +  C H FH  CID+WL     CP CR
Subjt:  NRRSHRPEAEALPVKDREQEMVVRVQASDF--SFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCR

AT5G10380.1 RING/U-box superfamily protein4.6e-1339.24Show/hide
Query:  LPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIV
        +P     +  +  +    F  G G  D  EC++CL EFEE E  R + +C H FH NCID WL   ++CPLCR  V ++
Subjt:  LPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIV

AT5G58580.1 TOXICOS EN LEVADURA 631.5e-1150.88Show/hide
Query:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHD
        D+++EC ICLG +E G+  RK+  CGH FH  CID WL     CPLCR  V   V D
Subjt:  DDDDECAICLGEFEEGEKCRKMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCATCAGCTTCAGTTCCTTCAACGTCGTCGTTTCACGGCGTCTCCCAAACCCTCTTTGGGCTGCCTCAATATTATGAGTATTTGGGTGTGGCTTCCATG
TTCATGGTGTTTGTAATATGTTTATTTGCTGTGAGATGGTGCAACAGAAGAAGCCACCGCCCCGAAGCCGAAGCTTTGCCGGTGAAAGATCGAGAGCAGGAGATG
GTGGTCCGGGTTCAAGCCTCGGATTTCAGTTTCGGCGGTGGCGGTGACGATGACGACGAATGTGCGATTTGCCTGGGCGAGTTTGAAGAAGGGGAGAAGTGCCGG
AAGATGAGTGAGTGCGGCCACATATTTCACCGGAACTGCATTGACCGGTGGCTGAGGGTGGAGCGCCACTGCCCACTTTGCCGGGGCTGCGTTTGCATCGTCGTC
CACGACGCTAACACCGTAGTGCCTTCGACACCCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCATCAGCTTCAGTTCCTTCAACGTCGTCGTTTCACGGCGTCTCCCAAACCCTCTTTGGGCTGCCTCAATATTATGAGTATTTGGGTGTGGCTTCCATG
TTCATGGTGTTTGTAATATGTTTATTTGCTGTGAGATGGTGCAACAGAAGAAGCCACCGCCCCGAAGCCGAAGCTTTGCCGGTGAAAGATCGAGAGCAGGAGATG
GTGGTCCGGGTTCAAGCCTCGGATTTCAGTTTCGGCGGTGGCGGTGACGATGACGACGAATGTGCGATTTGCCTGGGCGAGTTTGAAGAAGGGGAGAAGTGCCGG
AAGATGAGTGAGTGCGGCCACATATTTCACCGGAACTGCATTGACCGGTGGCTGAGGGTGGAGCGCCACTGCCCACTTTGCCGGGGCTGCGTTTGCATCGTCGTC
CACGACGCTAACACCGTAGTGCCTTCGACACCCCATTAA
Protein sequenceShow/hide protein sequence
MSSSASVPSTSSFHGVSQTLFGLPQYYEYLGVASMFMVFVICLFAVRWCNRRSHRPEAEALPVKDREQEMVVRVQASDFSFGGGGDDDDECAICLGEFEEGEKCR
KMSECGHIFHRNCIDRWLRVERHCPLCRGCVCIVVHDANTVVPSTPH