; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-H2 finger protein ATL39-like
Genome locationchr3:3556816..3562159
RNA-Seq ExpressionMoc03g04780
SyntenyMoc03g04780
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]1.1e-2847.5Show/hide
Query:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIWRTESELTS---------------------NLPSDH----KT
        M+EKVPPKFKLPAIK++DG  +P+DHLD Y EW +IYG+ EAI CRVFSF L GS RIW  + +  S                     + P  +    K 
Subjt:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIWRTESELTS---------------------NLPSDH----KT

Query:  KSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
        K+         +FN+EKLQVEGLT A+ LL F+S ++DE L FSF K+T  TF++A SRA
Subjt:  KSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.5e-3555.83Show/hide
Query:  EEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR---------
        EEIM+ KVPPKFKLP +KQFDG  + VDHLD Y EWM+IYGV EA+ CRVFS  L GS R+W     R       +L     T+   G SR         
Subjt:  EEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR---------

Query:  -----------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
                      +FNEEKLQVEGLT A+SL+AFMSDIRDEHLSFSF KKTPSTF++ALSRA
Subjt:  -----------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]3.1e-2847.2Show/hide
Query:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW--------------------------RTESELTSNLPSDHK
        M+EK  PKFKLPAI ++DG A+P+DHLD Y EW +IY + EAI CRVFSF L GS R W                          R +S+  + L +  K
Subjt:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW--------------------------RTESELTSNLPSDHK

Query:  TKSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
         K+         +FNEEKLQVEGLT A++L+AF+S ++DE L FSF K+TP TF +ALSRA
Subjt:  TKSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.6e-4740.24Show/hide
Query:  RRRLNIDDPLLGGVEGETSRHNLELREGLPDDLRVKALDQLENKSVALEEKVEE----------------------------------------------
        +RRLN+ DP +GG E  TS+ N E +EGL +   +   +  + +   LE+K  +                                              
Subjt:  RRRLNIDDPLLGGVEGETSRHNLELREGLPDDLRVKALDQLENKSVALEEKVEE----------------------------------------------

Query:  -------------------------------KSGERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWE
                                       K  +R E  EK+ S KEKGFDLEEL+D+ADSPFTEEIMREKVPPKFKLP +KQFD   +PVDHLD Y E
Subjt:  -------------------------------KSGERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWE

Query:  WMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAF
        WM+IYGV EA+ CRVFS  L+GS RIW     R       +L     T+   G  R                       +FNEEKLQVEGLT A+SLLAF
Subjt:  WMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAF

Query:  MSDIRDEHLSFSFRKKTPSTFAKALSRA
        MS +RDEHLSFSF K+TP+TF++ALSRA
Subjt:  MSDIRDEHLSFSFRKKTPSTFAKALSRA

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]1.9e-4657.22Show/hide
Query:  ERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RT
        +R E  EK+ + KEKGFDLEEL+ +ADSPFTEEIMREKVPPKFKLP +K FDGM  PVDHLD Y EWM+IYGV +AI CRVFS  L+GS RIW     R 
Subjt:  ERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RT

Query:  ESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
              +L     T+   G  R                       +FNEEKLQ+EGLT A+SLLAFMS +RDEHLSFSF K+TPSTF++ALSRA
Subjt:  ESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166195.1e-2947.5Show/hide
Query:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIWRTESELTS---------------------NLPSDH----KT
        M+EKVPPKFKLPAIK++DG  +P+DHLD Y EW +IYG+ EAI CRVFSF L GS RIW  + +  S                     + P  +    K 
Subjt:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIWRTESELTS---------------------NLPSDH----KT

Query:  KSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
        K+         +FN+EKLQVEGLT A+ LL F+S ++DE L FSF K+T  TF++A SRA
Subjt:  KSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

A0A6J1D7D2 uncharacterized protein LOC1110183077.4e-3655.83Show/hide
Query:  EEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR---------
        EEIM+ KVPPKFKLP +KQFDG  + VDHLD Y EWM+IYGV EA+ CRVFS  L GS R+W     R       +L     T+   G SR         
Subjt:  EEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR---------

Query:  -----------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
                      +FNEEKLQVEGLT A+SL+AFMSDIRDEHLSFSF KKTPSTF++ALSRA
Subjt:  -----------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

A0A6J1DWY0 uncharacterized protein LOC1110252933.2e-4740.24Show/hide
Query:  RRRLNIDDPLLGGVEGETSRHNLELREGLPDDLRVKALDQLENKSVALEEKVEE----------------------------------------------
        +RRLN+ DP +GG E  TS+ N E +EGL +   +   +  + +   LE+K  +                                              
Subjt:  RRRLNIDDPLLGGVEGETSRHNLELREGLPDDLRVKALDQLENKSVALEEKVEE----------------------------------------------

Query:  -------------------------------KSGERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWE
                                       K  +R E  EK+ S KEKGFDLEEL+D+ADSPFTEEIMREKVPPKFKLP +KQFD   +PVDHLD Y E
Subjt:  -------------------------------KSGERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWE

Query:  WMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAF
        WM+IYGV EA+ CRVFS  L+GS RIW     R       +L     T+   G  R                       +FNEEKLQVEGLT A+SLLAF
Subjt:  WMNIYGVLEAIGCRVFSFILDGSPRIW-----RTESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAF

Query:  MSDIRDEHLSFSFRKKTPSTFAKALSRA
        MS +RDEHLSFSF K+TP+TF++ALSRA
Subjt:  MSDIRDEHLSFSFRKKTPSTFAKALSRA

A0A6J1DZ49 uncharacterized protein LOC1110248511.5e-2847.2Show/hide
Query:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW--------------------------RTESELTSNLPSDHK
        M+EK  PKFKLPAI ++DG A+P+DHLD Y EW +IY + EAI CRVFSF L GS R W                          R +S+  + L +  K
Subjt:  MREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW--------------------------RTESELTSNLPSDHK

Query:  TKSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
         K+         +FNEEKLQVEGLT A++L+AF+S ++DE L FSF K+TP TF +ALSRA
Subjt:  TKSDRGPSRLYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

A0A6J1E1E7 uncharacterized protein LOC1110255489.3e-4757.22Show/hide
Query:  ERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RT
        +R E  EK+ + KEKGFDLEEL+ +ADSPFTEEIMREKVPPKFKLP +K FDGM  PVDHLD Y EWM+IYGV +AI CRVFS  L+GS RIW     R 
Subjt:  ERLELFEKQLSLKEKGFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIW-----RT

Query:  ESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA
              +L     T+   G  R                       +FNEEKLQ+EGLT A+SLLAFMS +RDEHLSFSF K+TPSTF++ALSRA
Subjt:  ESELTSNLPSDHKTKSDRGPSR--------------------LYGQFNEEKLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAATGGACACACCACTTCTCGACCCACCGCCACCGCCGCCCGTCTTACCGTCGAGTATCCTCTCCTCTCTCGATCTCGACTTTCTCAACATCGCGGGAATGTCCTC
CCTCGCCCTCATGATCGTCTACTTCATCTACACCTGCTACGAGCACAAATACTCGCAACGGCAGACGGCAGCGGCAGCAGCGGGAGGGGGCGAGGAACGACGAGCCGCAG
CCTCGACGGCGGAGATGCGCACGAAGCTGTTCCAGTACGGGGAGAGGGGCATAGAGGGGAGAAACGCCGATTGCTCGATTTGCTTGGACGAATTCAGTGAAGGGCAGGAG
AAATTAAGCCGGGCGAAGCAACCTGTGAAGGACGGGCCAGACCGAGCAGGGCTCGGTGCCGAGCCCCGTCCTTGCTCCTCTACTACTGCAGGAGGTGTCTCGACCAAAGA
CCTAAGGAGGAGGCTTAACATAGACGACCCCCTGCTAGGAGGAGTTGAGGGTGAGACGAGCCGACACAACCTGGAGCTTCGAGAAGGGCTGCCAGATGACCTGCGAGTTA
AGGCTCTAGATCAACTCGAAAACAAGTCTGTGGCCCTGGAAGAGAAGGTCGAGGAGAAGTCGGGGGAGCGACTCGAATTATTCGAAAAGCAACTGAGCTTGAAAGAAAAG
GGATTCGATCTCGAGGAATTAGTAGACGAAGCAGATTCCCCGTTCACGGAGGAGATAATGAGGGAGAAGGTGCCTCCAAAATTCAAGCTACCAGCCATAAAGCAGTTTGA
TGGGATGGCTAACCCGGTAGATCATCTCGACACCTACTGGGAATGGATGAACATCTACGGGGTCTTAGAGGCAATCGGATGCCGAGTTTTCTCATTCATTCTAGACGGGT
CGCCCAGGATTTGGAGGACGGAATCGGAGCTGACCAGTAACCTACCTTCTGACCATAAAACAAAGAGCGACAGAGGGCCTTCACGATTATATGGTCAGTTCAATGAGGAG
AAGCTACAAGTGGAAGGTCTTACTGCTGCATTATCACTACTGGCTTTCATGTCCGACATCAGGGATGAACACCTATCGTTTTCGTTCAGAAAGAAAACCCCGAGTACCTT
TGCAAAAGCATTGAGCCGAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAATGGACACACCACTTCTCGACCCACCGCCACCGCCGCCCGTCTTACCGTCGAGTATCCTCTCCTCTCTCGATCTCGACTTTCTCAACATCGCGGGAATGTCCTC
CCTCGCCCTCATGATCGTCTACTTCATCTACACCTGCTACGAGCACAAATACTCGCAACGGCAGACGGCAGCGGCAGCAGCGGGAGGGGGCGAGGAACGACGAGCCGCAG
CCTCGACGGCGGAGATGCGCACGAAGCTGTTCCAGTACGGGGAGAGGGGCATAGAGGGGAGAAACGCCGATTGCTCGATTTGCTTGGACGAATTCAGTGAAGGGCAGGAG
AAATTAAGCCGGGCGAAGCAACCTGTGAAGGACGGGCCAGACCGAGCAGGGCTCGGTGCCGAGCCCCGTCCTTGCTCCTCTACTACTGCAGGAGGTGTCTCGACCAAAGA
CCTAAGGAGGAGGCTTAACATAGACGACCCCCTGCTAGGAGGAGTTGAGGGTGAGACGAGCCGACACAACCTGGAGCTTCGAGAAGGGCTGCCAGATGACCTGCGAGTTA
AGGCTCTAGATCAACTCGAAAACAAGTCTGTGGCCCTGGAAGAGAAGGTCGAGGAGAAGTCGGGGGAGCGACTCGAATTATTCGAAAAGCAACTGAGCTTGAAAGAAAAG
GGATTCGATCTCGAGGAATTAGTAGACGAAGCAGATTCCCCGTTCACGGAGGAGATAATGAGGGAGAAGGTGCCTCCAAAATTCAAGCTACCAGCCATAAAGCAGTTTGA
TGGGATGGCTAACCCGGTAGATCATCTCGACACCTACTGGGAATGGATGAACATCTACGGGGTCTTAGAGGCAATCGGATGCCGAGTTTTCTCATTCATTCTAGACGGGT
CGCCCAGGATTTGGAGGACGGAATCGGAGCTGACCAGTAACCTACCTTCTGACCATAAAACAAAGAGCGACAGAGGGCCTTCACGATTATATGGTCAGTTCAATGAGGAG
AAGCTACAAGTGGAAGGTCTTACTGCTGCATTATCACTACTGGCTTTCATGTCCGACATCAGGGATGAACACCTATCGTTTTCGTTCAGAAAGAAAACCCCGAGTACCTT
TGCAAAAGCATTGAGCCGAGCGTAG
Protein sequenceShow/hide protein sequence
MRMDTPLLDPPPPPPVLPSSILSSLDLDFLNIAGMSSLALMIVYFIYTCYEHKYSQRQTAAAAAGGGEERRAAASTAEMRTKLFQYGERGIEGRNADCSICLDEFSEGQE
KLSRAKQPVKDGPDRAGLGAEPRPCSSTTAGGVSTKDLRRRLNIDDPLLGGVEGETSRHNLELREGLPDDLRVKALDQLENKSVALEEKVEEKSGERLELFEKQLSLKEK
GFDLEELVDEADSPFTEEIMREKVPPKFKLPAIKQFDGMANPVDHLDTYWEWMNIYGVLEAIGCRVFSFILDGSPRIWRTESELTSNLPSDHKTKSDRGPSRLYGQFNEE
KLQVEGLTAALSLLAFMSDIRDEHLSFSFRKKTPSTFAKALSRA