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Moc03g04830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr3:3591262..3593986
RNA-Seq ExpressionMoc03g04830
SyntenyMoc03g04830
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653247.1 hypothetical protein Csa_019633 [Cucumis sativus]4.3e-1552.56Show/hide
Query:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        P    V   RLF+YG  GG  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

XP_022964750.1 RING-H2 finger protein ATL39-like [Cucurbita moschata]3.3e-1552.7Show/hide
Query:  STVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        + V   RLF+YG+ G  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R I+
Subjt:  STVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

XP_022970579.1 RING-H2 finger protein ATL14-like [Cucurbita maxima]8.6e-1641.67Show/hide
Query:  IIAVAGVYDVFVLF--PYVNFILGISERRTTALA-VAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG
        I+AV  +Y ++  +   Y N    I   R+ A A V    +     + V   RLF+YG+ G +GKNADC  CL+EF +GE+CRML  CKHVFH  CID+ 
Subjt:  IIAVAGVYDVFVLF--PYVNFILGISERRTTALA-VAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG

Query:  TVKNDYCPICRSSILARVIY
             +CP+CRS +  R I+
Subjt:  TVKNDYCPICRSSILARVIY

XP_023520573.1 RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo]4.3e-1541.32Show/hide
Query:  IIIAVAGVYDVFVLF--PYVNFILGISERRTTA-LAVAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDK
        +I+AV  +Y ++  +   Y N    I   R+ A  AV    +     + V   RLF+YG+ G  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+
Subjt:  IIIAVAGVYDVFVLF--PYVNFILGISERRTTA-LAVAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDK

Query:  GTVKNDYCPICRSSILARVIY
              +CP+CRS +  R I+
Subjt:  GTVKNDYCPICRSSILARVIY

XP_038895799.1 E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]7.8e-1752.7Show/hide
Query:  STVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        + V   +LF+YG+GG  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R++Y
Subjt:  STVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

TrEMBL top hitse value%identityAlignment
A0A0A0M0H1 RING-type E3 ubiquitin transferase2.1e-1552.56Show/hide
Query:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        P    V   RLF+YG  GG  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A5A7VKM2 RING-H2 finger protein ATL39-like2.7e-1552.56Show/hide
Query:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        P    V   RLF+YG  GG  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A5D3BEF0 RING-H2 finger protein ATL39-like2.7e-1552.56Show/hide
Query:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        P    V   RLF+YG  GG  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+       CP+CRS +  R++Y
Subjt:  PLPSTVALKRLFEYG-KGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A6J1HLQ2 RING-type E3 ubiquitin transferase1.6e-1552.7Show/hide
Query:  STVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY
        + V   RLF+YG+ G  GKNADC  CL+EF +GE+CRML  CKHVFH  CID+      +CP+CRS +  R I+
Subjt:  STVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILARVIY

A0A6J1I603 RING-type E3 ubiquitin transferase4.2e-1641.67Show/hide
Query:  IIAVAGVYDVFVLF--PYVNFILGISERRTTALA-VAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG
        I+AV  +Y ++  +   Y N    I   R+ A A V    +     + V   RLF+YG+ G +GKNADC  CL+EF +GE+CRML  CKHVFH  CID+ 
Subjt:  IIAVAGVYDVFVLF--PYVNFILGISERRTTALA-VAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG

Query:  TVKNDYCPICRSSILARVIY
             +CP+CRS +  R I+
Subjt:  TVKNDYCPICRSSILARVIY

SwissProt top hitse value%identityAlignment
P87237 Uncharacterized RING finger protein C4G3.12c5.3e-0839.73Show/hide
Query:  PLPSTVALKR---LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG-TVKNDYCPICRS
        P+ S   +KR   LF Y           C+ CLE +  G++CR L  CKH FH  CID+  T  N+ CP+CR+
Subjt:  PLPSTVALKR---LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKG-TVKNDYCPICRS

Q9LY41 E3 ubiquitin-protein ligase ATL46.9e-0830.68Show/hide
Query:  RRTTALAVAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA
        RR +   V+P  +   +  ++ + +     +      + DC  CL +F+  +  R+L  C H FHA+CID   V N  CP+CRS + A
Subjt:  RRTTALAVAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA

Q9M0C3 RING-H2 finger protein ATL142.1e-0939.39Show/hide
Query:  LKRL--FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI
        +KRL  F+Y +   +    DC+ C++ F++G+ CR L  C HVFH  C+D   +K   CPICR  +
Subjt:  LKRL--FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI

Q9SG96 RING-H2 finger protein ATL724.8e-0944.07Show/hide
Query:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        YG G  D K  +C+ CL +F+ GE  R+L  C H FH  CID   +    CP CR S+L
Subjt:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

Q9SJJ7 RING-H2 finger protein ATL576.2e-0938.71Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        ++ Y K  K  +N DC+ CL +F++GE  +++ +C HVFH +C+D        CP+CRS+ L
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

Arabidopsis top hitse value%identityAlignment
AT2G27940.1 RING/U-box superfamily protein4.4e-1038.71Show/hide
Query:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        ++ Y K  K  +N DC+ CL +F++GE  +++ +C HVFH +C+D        CP+CRS+ L
Subjt:  LFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

AT2G28920.1 RING/U-box superfamily protein2.8e-1247.14Show/hide
Query:  PLPSTVALKRLFEYGKGGKDGKNAD-CIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRS
        PLP  V L +      G  DG  AD C+ CLE+FK  ++ R+LV CKHVFH +CID        CPICR+
Subjt:  PLPSTVALKRLFEYGKGGKDGKNAD-CIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRS

AT3G10910.1 RING/U-box superfamily protein3.4e-1044.07Show/hide
Query:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL
        YG G  D K  +C+ CL +F+ GE  R+L  C H FH  CID   +    CP CR S+L
Subjt:  YGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSIL

AT3G60220.1 TOXICOS EN LEVADURA 44.9e-0930.68Show/hide
Query:  RRTTALAVAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA
        RR +   V+P  +   +  ++ + +     +      + DC  CL +F+  +  R+L  C H FHA+CID   V N  CP+CRS + A
Subjt:  RRTTALAVAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSILA

AT4G30370.1 RING/U-box superfamily protein1.5e-1039.39Show/hide
Query:  LKRL--FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI
        +KRL  F+Y +   +    DC+ C++ F++G+ CR L  C HVFH  C+D   +K   CPICR  +
Subjt:  LKRL--FEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDYCPICRSSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTCCCAAGGCTTGGGAGACGAAGGCTGACGGAGTCGGGAATGCGATATTTTAAGCTGAGACGGCGTAAGTCCCTCGCTGATCAAGAACATCTGGCTCAAACGAG
ATTGAGAAATCATGAAAATTACTCTTATGCTAACAACAAGAATGTTGAGCAGCCACCAAAGGACATTACGCCTCAACTGAACGAAAATATATCATCCCTTCAGGAAATAC
TTGGTACTTTCATCACAGAATCCAGAAGCCGGACCAATCGAGTTGAAAAAGAGGTCGACAATATGGAAGCAAAAATTGATGAAAATACAAGAGCCATGAAGAATATTGAG
CATTCAGATATCTACTGTATTATTATCGCTGTTGCTGGCGTTTATGATGTTTTCGTTCTCTTTCCCTATGTCAATTTTATATTGGGAATAAGCGAACGGCGGACGACGGC
TCTGGCAGTTGCGCCACCGCAACAGCCGTTGCCGTTGCCGTCGACGGTGGCGCTTAAAAGGCTTTTTGAATATGGAAAAGGCGGAAAGGACGGGAAAAACGCGGATTGCA
TCTTCTGCTTGGAGGAGTTCAAGAAAGGTGAGTTGTGCCGCATGCTCGTGAATTGCAAACACGTTTTTCATGCAAATTGCATCGACAAGGGGACTGTCAAAAATGATTAT
TGCCCTATTTGTCGTTCCTCTATTCTTGCTCGTGTCATTTACTGTTCATCACCAGATTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTCCCAAGGCTTGGGAGACGAAGGCTGACGGAGTCGGGAATGCGATATTTTAAGCTGAGACGGCGTAAGTCCCTCGCTGATCAAGAACATCTGGCTCAAACGAG
ATTGAGAAATCATGAAAATTACTCTTATGCTAACAACAAGAATGTTGAGCAGCCACCAAAGGACATTACGCCTCAACTGAACGAAAATATATCATCCCTTCAGGAAATAC
TTGGTACTTTCATCACAGAATCCAGAAGCCGGACCAATCGAGTTGAAAAAGAGGTCGACAATATGGAAGCAAAAATTGATGAAAATACAAGAGCCATGAAGAATATTGAG
CATTCAGATATCTACTGTATTATTATCGCTGTTGCTGGCGTTTATGATGTTTTCGTTCTCTTTCCCTATGTCAATTTTATATTGGGAATAAGCGAACGGCGGACGACGGC
TCTGGCAGTTGCGCCACCGCAACAGCCGTTGCCGTTGCCGTCGACGGTGGCGCTTAAAAGGCTTTTTGAATATGGAAAAGGCGGAAAGGACGGGAAAAACGCGGATTGCA
TCTTCTGCTTGGAGGAGTTCAAGAAAGGTGAGTTGTGCCGCATGCTCGTGAATTGCAAACACGTTTTTCATGCAAATTGCATCGACAAGGGGACTGTCAAAAATGATTAT
TGCCCTATTTGTCGTTCCTCTATTCTTGCTCGTGTCATTTACTGTTCATCACCAGATTCCTAG
Protein sequenceShow/hide protein sequence
MLFPRLGRRRLTESGMRYFKLRRRKSLADQEHLAQTRLRNHENYSYANNKNVEQPPKDITPQLNENISSLQEILGTFITESRSRTNRVEKEVDNMEAKIDENTRAMKNIE
HSDIYCIIIAVAGVYDVFVLFPYVNFILGISERRTTALAVAPPQQPLPLPSTVALKRLFEYGKGGKDGKNADCIFCLEEFKKGELCRMLVNCKHVFHANCIDKGTVKNDY
CPICRSSILARVIYCSSPDS