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Moc03g04860 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04860
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr3:3607314..3612613
RNA-Seq ExpressionMoc03g04860
SyntenyMoc03g04860
Gene Ontology termsGO:0006955 - immune response (biological process)
GO:0098542 - defense response to other organism (biological process)
GO:0016020 - membrane (cellular component)
GO:0043531 - ADP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW25250.1 putative disease resistance RPP13-like protein 1 [Vitis vinifera]4.4e-0949.55Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLL-HKMIKNQPKIGGAREKEEHQRMVNFLIVVFVK
        MVSVP KFE+KIS+IEES DL TL+I EL SKL AQEQR  M   +  +GAF A  KGK+S   NL   K  KN        + E   R   F      K
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLL-HKMIKNQPKIGGAREKEEHQRMVNFLIVVFVK

Query:  RPTMLRRIVEQ
         PTMLRR++ Q
Subjt:  RPTMLRRIVEQ

RVW82648.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]5.2e-1048.62Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV
        MVSVP +FE+KIS+IEES DL TL+I EL SKL AQEQR  M   +  +GAF A  KGK+S   NL  K     N+ K  G+  K++      F + + V
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV

Query:  KRPTMLRRI
        + PTMLR+I
Subjt:  KRPTMLRRI

RVW94208.1 hypothetical protein CK203_034764 [Vitis vinifera]5.7e-0957.65Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREK
        MVSVP KFE+KIS+IEES DL +L+IAEL SKL AQEQR  M   +  KGAF A  KGKSS   NL  K     N+ K GG+  K
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREK

RVX01547.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]1.9e-1250.91Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV
        MVSVP KFE+KIS+IEES+DL TL+I EL SKL AQEQR  M   + ++GAF    KGK+S   NL  K     N+ K  G+  KE      NF + + V
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV

Query:  KRPTMLRRIV
        + PTMLR+IV
Subjt:  KRPTMLRRIV

XP_034928651.1 uncharacterized protein LOC118059786 [Populus alba]2.6e-0967.21Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSS
        M+S+P +FE+KIS+IEES DL TLSIAELISKLQ QEQR  M + + V+GAF A FKGK S
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSS

TrEMBL top hitse value%identityAlignment
A0A0V0HNI3 Putative ovule protein5.6e-1050Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMIKNQPKIGGAREKEEHQRMVNFLIVVFVKR
        +VS+P KFESKIS+IEES DLTTL+IAELISKLQ QEQR TM ++  V+ AF A+ K K  K    +      + K GG   + +     NF +V FV+R
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMIKNQPKIGGAREKEEHQRMVNFLIVVFVKR

Query:  PT
         T
Subjt:  PT

A0A1U8E2J8 uncharacterized protein LOC1078411544.7e-0955.7Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMIKNQPKIGG
        MVS+P KFESKIS+IEES DLTTLSIAELISKLQ Q+QR TM ++  V+ AF  + K K  K   ++      + K GG
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMIKNQPKIGG

A0A438CPW6 Putative disease resistance RPP13-like protein 12.1e-0949.55Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLL-HKMIKNQPKIGGAREKEEHQRMVNFLIVVFVK
        MVSVP KFE+KIS+IEES DL TL+I EL SKL AQEQR  M   +  +GAF A  KGK+S   NL   K  KN        + E   R   F      K
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLL-HKMIKNQPKIGGAREKEEHQRMVNFLIVVFVK

Query:  RPTMLRRIVEQ
         PTMLRR++ Q
Subjt:  RPTMLRRIVEQ

A0A438HDV1 Retrovirus-related Pol polyprotein from transposon TNT 1-942.5e-1048.62Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV
        MVSVP +FE+KIS+IEES DL TL+I EL SKL AQEQR  M   +  +GAF A  KGK+S   NL  K     N+ K  G+  K++      F + + V
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV

Query:  KRPTMLRRI
        + PTMLR+I
Subjt:  KRPTMLRRI

A0A438IXZ1 Retrovirus-related Pol polyprotein from transposon TNT 1-949.2e-1350.91Show/hide
Query:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV
        MVSVP KFE+KIS+IEES+DL TL+I EL SKL AQEQR  M   + ++GAF    KGK+S   NL  K     N+ K  G+  KE      NF + + V
Subjt:  MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMI--KNQPKIGGAREKEEHQRMVNFLIVVFV

Query:  KRPTMLRRIV
        + PTMLR+IV
Subjt:  KRPTMLRRIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGTGTTCCTAGCAAATTTGAATCAAAGATCTCATCAATAGAGGAGTCTTTTGATTTGACTACTCTCTCTATAGCTGAGTTAATTAGCAAGTTACAAGCCCAAGA
ACAGAGGGATACAATGTGTAACAAGAAGCGTGTTAAAGGTGCCTTTATTGCCAAGTTCAAAGGCAAAAGTTCAAAGGCAAGAAACTTGCTGCACAAGATGATAAAAAATC
AACCAAAGATTGGGGGAGCAAGGGAAAAGGAGGAGCATCAAAGAATGGTAAATTTCCTCATTGTCGTTTTTGTAAAAAGACCAACCATGCTGAGAAGGATTGTTGAACAA
ATTGAATCTTCTTTTGATTCAATTGACTCTAATGATCACGATAACCAAGATTCTCCTTCGAATGATGATGATCTTGTTGATGCAATTGGTGATGGTTCAAATTACAAGGT
TAATGGCACTAAGGAACCTCTGAATGAAGGGGTGGAGGAGCAGTCTAACCCTTCTACTAAACATCTAAGGACAGAAGCCAACGAACCCCAGAGGTGGGTCCTAGAGGTGT
TCGCTGACCACAGTTTAAACCATAAACTAACCAATGAAATGAAGAAGTACTTGAGTAAGTTGATATCCAAGGCGATGTTTACTTTCTCAAAATACTTTGCTGAGCTGAGA
ATCAACTCGTCGAAGTGGGACCAATGTTGGAGGTTGTTTATCGCCTGCCATGTGTCAGTAAATGATAAGGTCCAAGCCGACCTTACAAAGTCGGATGACTGTTATGCTGC
TGTCAGAAGAGCCTTGTCAGAGATCATCTCTGTAAATAGGGATGTCTGCCCTATAAGCAAAGTTCTTCGAGAGTGCCAGAGAGATCATCTTGTTCGTTCTGACCTAAGTG
GGATTCCGAACTTTGACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGTGTTCCTAGCAAATTTGAATCAAAGATCTCATCAATAGAGGAGTCTTTTGATTTGACTACTCTCTCTATAGCTGAGTTAATTAGCAAGTTACAAGCCCAAGA
ACAGAGGGATACAATGTGTAACAAGAAGCGTGTTAAAGGTGCCTTTATTGCCAAGTTCAAAGGCAAAAGTTCAAAGGCAAGAAACTTGCTGCACAAGATGATAAAAAATC
AACCAAAGATTGGGGGAGCAAGGGAAAAGGAGGAGCATCAAAGAATGGTAAATTTCCTCATTGTCGTTTTTGTAAAAAGACCAACCATGCTGAGAAGGATTGTTGAACAA
ATTGAATCTTCTTTTGATTCAATTGACTCTAATGATCACGATAACCAAGATTCTCCTTCGAATGATGATGATCTTGTTGATGCAATTGGTGATGGTTCAAATTACAAGGT
TAATGGCACTAAGGAACCTCTGAATGAAGGGGTGGAGGAGCAGTCTAACCCTTCTACTAAACATCTAAGGACAGAAGCCAACGAACCCCAGAGGTGGGTCCTAGAGGTGT
TCGCTGACCACAGTTTAAACCATAAACTAACCAATGAAATGAAGAAGTACTTGAGTAAGTTGATATCCAAGGCGATGTTTACTTTCTCAAAATACTTTGCTGAGCTGAGA
ATCAACTCGTCGAAGTGGGACCAATGTTGGAGGTTGTTTATCGCCTGCCATGTGTCAGTAAATGATAAGGTCCAAGCCGACCTTACAAAGTCGGATGACTGTTATGCTGC
TGTCAGAAGAGCCTTGTCAGAGATCATCTCTGTAAATAGGGATGTCTGCCCTATAAGCAAAGTTCTTCGAGAGTGCCAGAGAGATCATCTTGTTCGTTCTGACCTAAGTG
GGATTCCGAACTTTGACAATTAA
Protein sequenceShow/hide protein sequence
MVSVPSKFESKISSIEESFDLTTLSIAELISKLQAQEQRDTMCNKKRVKGAFIAKFKGKSSKARNLLHKMIKNQPKIGGAREKEEHQRMVNFLIVVFVKRPTMLRRIVEQ
IESSFDSIDSNDHDNQDSPSNDDDLVDAIGDGSNYKVNGTKEPLNEGVEEQSNPSTKHLRTEANEPQRWVLEVFADHSLNHKLTNEMKKYLSKLISKAMFTFSKYFAELR
INSSKWDQCWRLFIACHVSVNDKVQADLTKSDDCYAAVRRALSEIISVNRDVCPISKVLRECQRDHLVRSDLSGIPNFDN