; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g04890 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g04890
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationchr3:3631361..3636735
RNA-Seq ExpressionMoc03g04890
SyntenyMoc03g04890
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583431.1 RING-H2 finger protein ATL5, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1744.72Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS---PPPQ--TVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC
        M  QTR   D+E     +R+F    +E  RQQ S   PPP+  T EE +A+ V  +  ++I      DSD  CAIC EGF+E+++C V+++CGH FHK C
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS---PPPQ--TVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC

Query:  VDQWLTMERGCPLCRCFVLLCSD
        +DQWL +E  CPLCRC V + S+
Subjt:  VDQWLTMERGCPLCRCFVLLCSD

KAG7019192.1 E3 ubiquitin-protein ligase ATL42, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1744.72Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS---PPPQ--TVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC
        M  QTR   D+E     +R+F    +E  RQQ S   PPP+  T EE +A+ V  +  ++I      DSD  CAIC EGF+E+++C V+++CGH FHK C
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS---PPPQ--TVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC

Query:  VDQWLTMERGCPLCRCFVLLCSD
        +DQWL +E  CPLCRC V + S+
Subjt:  VDQWLTMERGCPLCRCFVLLCSD

XP_022158249.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]2.2e-5699.12Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERG
        MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERG
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERG

Query:  CPLCRCFVLLCSD
        CPLCRCFVLL SD
Subjt:  CPLCRCFVLLCSD

XP_022970384.1 RING-H2 finger protein ATL64-like [Cucurbita maxima]2.3e-1643.09Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQ-----PSPPPQTVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC
        ML QTR   D+E     +R+F    +E  RQQ     P P P T EE +A+ V  +   +I      DSD  CAIC EGFEE+++C V++ C H FHK C
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQ-----PSPPPQTVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC

Query:  VDQWLTMERGCPLCRCFVLLCSD
        +D+WL +   CPLCRC V + S+
Subjt:  VDQWLTMERGCPLCRCFVLLCSD

XP_023520574.1 RING-H2 finger protein ATL64-like [Cucurbita pepo subsp. pepo]5.9e-1743.09Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS-----PPPQTVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC
        M +QTR   D+E     +R+F    +E  R+Q S     P P T EE +A+ V  +  ++I      DSD  CAIC EGFEE ++C V+++CGH FHK C
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS-----PPPQTVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC

Query:  VDQWLTMERGCPLCRCFVLLCSD
        +DQWL ++  CPLCRC V + S+
Subjt:  VDQWLTMERGCPLCRCFVLLCSD

TrEMBL top hitse value%identityAlignment
A0A5A7VMH1 RING-H2 finger protein ATL52-like1.9e-1338.46Show/hide
Query:  LSQTRVYDDIESRVQVSRVFTIVLSERA-----RQQPSPPPQTVEEASATAVAIIEAEEIIDSDRD-----CAICFEGFEEKQVCRVIEKCGHFFHKDCV
        L+QTR   DIE R+   R   ++   +A     RQ  +    T E    ++  +  A ++ D++       CAIC E FE++++C V+E CGH FH+DC+
Subjt:  LSQTRVYDDIESRVQVSRVFTIVLSERA-----RQQPSPPPQTVEEASATAVAIIEAEEIIDSDRD-----CAICFEGFEEKQVCRVIEKCGHFFHKDCV

Query:  DQWLTMERGCPLCRCFV
        DQWL +E  CPLCRC V
Subjt:  DQWLTMERGCPLCRCFV

A0A6J1DVK4 RING-H2 finger protein ATL14-like4.1e-1658.9Show/hide
Query:  PQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVL
        PQT E+  A+AVA    EEI D    CAIC EGF E++ C VIE CGHFFHKDC+D+WL +E  CPLCRC ++
Subjt:  PQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVL

A0A6J1DYV0 E3 ubiquitin-protein ligase RING1-like1.1e-5699.12Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERG
        MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERG
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERG

Query:  CPLCRCFVLLCSD
        CPLCRCFVLL SD
Subjt:  CPLCRCFVLLCSD

A0A6J1HJU0 RING-type E3 ubiquitin transferase5.4e-1643.09Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS---PPPQ--TVEEASATAVA-----IIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC
        M  QTR   D+E     +R+F    +E  +QQ S   PPP+  T EE +A+ V       I+  E  D D  CAIC EGFEE+++C V+++CGH FHK C
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPS---PPPQ--TVEEASATAVA-----IIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC

Query:  VDQWLTMERGCPLCRCFVLLCSD
        +DQWL +   CPLCRC + + S+
Subjt:  VDQWLTMERGCPLCRCFVLLCSD

A0A6J1I5C3 RING-type E3 ubiquitin transferase1.1e-1643.09Show/hide
Query:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQ-----PSPPPQTVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC
        ML QTR   D+E     +R+F    +E  RQQ     P P P T EE +A+ V  +   +I      DSD  CAIC EGFEE+++C V++ C H FHK C
Subjt:  MLSQTRVYDDIESRVQVSRVFTIVLSERARQQ-----PSPPPQTVEEASATAVAIIEAEEI-----IDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDC

Query:  VDQWLTMERGCPLCRCFVLLCSD
        +D+WL +   CPLCRC V + S+
Subjt:  VDQWLTMERGCPLCRCFVLLCSD

SwissProt top hitse value%identityAlignment
Q14B02 E3 ubiquitin-protein ligase RNF1339.5e-1035.21Show/hide
Query:  EEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSDFQFLFHNSTSS
        EE+  +   C ICFE ++  ++ R++  C HFFHK+C+D W+     CP+C+C +L     Q    + T S
Subjt:  EEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSDFQFLFHNSTSS

Q8WVZ7 E3 ubiquitin-protein ligase RNF1339.5e-1037.68Show/hide
Query:  EEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSDFQFLFHNST
        EEI  +   C ICFE ++   + R++  C HFFHK+C+D W+     CP+C+C +L     Q +  N T
Subjt:  EEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSDFQFLFHNST

Q9LRB7 E3 ubiquitin-protein ligase EL53.3e-1041.89Show/hide
Query:  PQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLL
        P TV   S  A A  E EE  D   +CA+C    E+ +  R + +CGH FH +CVD WL     CPLCR  V++
Subjt:  PQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLL

Q9LX93 E3 ubiquitin-protein ligase RING11.1e-1042.86Show/hide
Query:  SATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSD
        S T V   + E IID   +C++C   FEE +  R++ KC H FH +C+D WL   + CPLCR  VLL ++
Subjt:  SATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSD

Q9ZV51 RING-H2 finger protein ATL564.3e-1049.02Show/hide
Query:  DRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLL
        + DC +CF+GF + Q CR +  CGH FH+ CVD WL     CP+CR  V L
Subjt:  DRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLL

Arabidopsis top hitse value%identityAlignment
AT2G18670.1 RING/U-box superfamily protein3.0e-1149.02Show/hide
Query:  DRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLL
        + DC +CF+GF + Q CR +  CGH FH+ CVD WL     CP+CR  V L
Subjt:  DRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLL

AT2G20030.1 RING/U-box superfamily protein1.2e-1041.94Show/hide
Query:  DCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSDFQFLFHNSTS
        +C++C   FE+ ++ R++ KC H FH  C+DQWL     CPLCR  V +  D   L ++STS
Subjt:  DCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSDFQFLFHNSTS

AT2G27940.1 RING/U-box superfamily protein1.5e-1054.35Show/hide
Query:  DRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCR
        + DC IC   FEE +  +VI  CGH FH DCVD WL+    CPLCR
Subjt:  DRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCR

AT4G30370.1 RING/U-box superfamily protein1.2e-1050Show/hide
Query:  DCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCR
        DC +C +GF + Q CR + +CGH FH+ CVD WL     CP+CR
Subjt:  DCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCR

AT5G10380.1 RING/U-box superfamily protein8.0e-1242.86Show/hide
Query:  SATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSD
        S T V   + E IID   +C++C   FEE +  R++ KC H FH +C+D WL   + CPLCR  VLL ++
Subjt:  SATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLLCSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTCTCAAACAAGAGTCTACGACGATATCGAATCCAGAGTTCAAGTATCTCGAGTTTTCACTATAGTTTTGTCCGAAAGAGCACGGCAGCAGCCGTCTCCGCCACC
ACAGACGGTGGAAGAAGCCTCCGCAACCGCCGTTGCAATCATCGAGGCAGAGGAAATTATCGATTCCGACAGGGACTGCGCGATATGTTTCGAGGGATTTGAGGAGAAAC
AAGTGTGCCGAGTAATTGAGAAATGCGGCCATTTTTTCCATAAGGATTGCGTCGATCAGTGGCTCACTATGGAGCGCGGTTGCCCGCTGTGCCGCTGCTTTGTTCTCCTT
TGTTCCGACTTTCAATTCTTGTTTCATAACTCAACATCAAGCTGCGTACATCTTCAAGCGATGGCGTATTCGTGCGGTTCTGAACTGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTCTCAAACAAGAGTCTACGACGATATCGAATCCAGAGTTCAAGTATCTCGAGTTTTCACTATAGTTTTGTCCGAAAGAGCACGGCAGCAGCCGTCTCCGCCACC
ACAGACGGTGGAAGAAGCCTCCGCAACCGCCGTTGCAATCATCGAGGCAGAGGAAATTATCGATTCCGACAGGGACTGCGCGATATGTTTCGAGGGATTTGAGGAGAAAC
AAGTGTGCCGAGTAATTGAGAAATGCGGCCATTTTTTCCATAAGGATTGCGTCGATCAGTGGCTCACTATGGAGCGCGGTTGCCCGCTGTGCCGCTGCTTTGTTCTCCTT
TGTTCCGACTTTCAATTCTTGTTTCATAACTCAACATCAAGCTGCGTACATCTTCAAGCGATGGCGTATTCGTGCGGTTCTGAACTGAAGTGA
Protein sequenceShow/hide protein sequence
MLSQTRVYDDIESRVQVSRVFTIVLSERARQQPSPPPQTVEEASATAVAIIEAEEIIDSDRDCAICFEGFEEKQVCRVIEKCGHFFHKDCVDQWLTMERGCPLCRCFVLL
CSDFQFLFHNSTSSCVHLQAMAYSCGSELK