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Moc03g05200 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g05200
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr3:3850075..3854497
RNA-Seq ExpressionMoc03g05200
SyntenyMoc03g05200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8538921.1 hypothetical protein F0562_025613 [Nyssa sinensis]6.0e-1249.3Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF
        +T +KL G NYLQWSQSV M + G+  +D++T    PP+  DPK+  W++ NN VM+WLIN M NE+   F
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF

KAG5219081.1 Retrovirus-related polyprotein from transposon [Salix suchowensis]4.6e-1246.48Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF
        +TC+KL GYNYLQWS SV M + G+  +D++T +   P  +DP+F  W+  N+ +M+WLIN M NE+   F
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF

PIN18143.1 hypothetical protein CDL12_09191 [Handroanthus impetiginosus]2.4e-1353.73Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANEL
        +T +KL G NY+QWSQSVKM + GR  ++++T +  PPKPDDPK+  W+  NN VM+WL+N M NE+
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANEL

RVW35150.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]7.0e-1350.7Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF
        +T +KL G+NYLQWSQS+ M + G+  +DH+TR    PK +DP F  W++ NN VM+WLIN M NE+   F
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF

RVW90308.1 hypothetical protein CK203_036736 [Vitis vinifera]7.0e-1350.7Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF
        +T +KL G+NYLQWSQS+ M + G+  +DH+TR    PK +DP F  W++ NN VM+WLIN M NE+   F
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF

TrEMBL top hitse value%identityAlignment
A0A2G9HL36 Uncharacterized protein1.2e-1353.73Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANEL
        +T +KL G NY+QWSQSVKM + GR  ++++T +  PPKPDDPK+  W+  NN VM+WL+N M NE+
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANEL

A0A2H9ZVY7 Retrovirus-related Pol polyprotein from transposon TNT 1-946.4e-1237.25Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRFGKLFGIHSPDLLPKKMIANPEICAGLYLV
        +T +KLTG+NY QW+++V M + GR  ++++   T PPK DD +F  W   NNQVM+WLIN M  E+   F      H   +  K+  ++ +  A L+ +
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRFGKLFGIHSPDLLPKKMIANPEICAGLYLV

Query:  RG
        +G
Subjt:  RG

A0A438DI48 Retrovirus-related Pol polyprotein from transposon TNT 1-943.4e-1350.7Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF
        +T +KL G+NYLQWSQS+ M + G+  +DH+TR    PK +DP F  W++ NN VM+WLIN M NE+   F
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF

A0A438I0Q7 Retrotran_gag_3 domain-containing protein3.4e-1350.7Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF
        +T +KL G+NYLQWSQS+ M + G+  +DH+TR    PK +DP F  W++ NN VM+WLIN M NE+   F
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF

A0A5J5BCH9 Uncharacterized protein2.9e-1249.3Show/hide
Query:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF
        +T +KL G NYLQWSQSV M + G+  +D++T    PP+  DPK+  W++ NN VM+WLIN M NE+   F
Subjt:  VTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTTGCCACGTGTCCAGAATGGATTCGAATGAACTTCTCTGCCAGGTCGAGATCGAACCTGACAAAGAGGGGGCCAATGTTTGGGGGTCCACCTCGGCCTTGCC
GAGGAGACTGGGCTCGCCCATTACAAAAAAGGCTAAGTATGGGCATTATGGTTCGACTTGGCTTGGGTCCGACCTGCTCGAAACCCGACAGGTCCACTCTAGTGTTCAGG
TCGGAGCCGGAGACCGGCAAAAGGTCTCCAAAGCCTTGGATGATGTGAAATCGTTGGCTGATACAAAGAAACCAGAGGAAATACAAGAGATGTGGGAAATAGCTTTCAAC
ACGATAACTCTTTACCTGGTGGACAATGTCCTTCGACAGGTACAAAAGGCTGCAACTGCATCTAAGGTGACATGCTACAAACTCACAGGCTACAACTACCTTCAGTGGTC
CCAATCAGTAAAGATGCTCATGTATGGTCGTGAGCTGGAAGACCATATCACGAGAAAAACAAGACCACCAAAACCCGATGATCCAAAATTTTGCAAATGGAGGGCCGGAA
ATAATCAAGTCATGAATTGGTTAATAAACTTCATGGCAAATGAACTGCCAACGAGATTTGGGAAGCTGTTTGGGATACATTCTCCAGACCTGTTACCGAAGAAGATGATT
GCCAATCCTGAAATATGTGCTGGATTGTATCTTGTTAGAGGAAATAGTCCTCAACCAACAAAGGAATGCAATAAACTTGTAGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTTGCCACGTGTCCAGAATGGATTCGAATGAACTTCTCTGCCAGGTCGAGATCGAACCTGACAAAGAGGGGGCCAATGTTTGGGGGTCCACCTCGGCCTTGCC
GAGGAGACTGGGCTCGCCCATTACAAAAAAGGCTAAGTATGGGCATTATGGTTCGACTTGGCTTGGGTCCGACCTGCTCGAAACCCGACAGGTCCACTCTAGTGTTCAGG
TCGGAGCCGGAGACCGGCAAAAGGTCTCCAAAGCCTTGGATGATGTGAAATCGTTGGCTGATACAAAGAAACCAGAGGAAATACAAGAGATGTGGGAAATAGCTTTCAAC
ACGATAACTCTTTACCTGGTGGACAATGTCCTTCGACAGGTACAAAAGGCTGCAACTGCATCTAAGGTGACATGCTACAAACTCACAGGCTACAACTACCTTCAGTGGTC
CCAATCAGTAAAGATGCTCATGTATGGTCGTGAGCTGGAAGACCATATCACGAGAAAAACAAGACCACCAAAACCCGATGATCCAAAATTTTGCAAATGGAGGGCCGGAA
ATAATCAAGTCATGAATTGGTTAATAAACTTCATGGCAAATGAACTGCCAACGAGATTTGGGAAGCTGTTTGGGATACATTCTCCAGACCTGTTACCGAAGAAGATGATT
GCCAATCCTGAAATATGTGCTGGATTGTATCTTGTTAGAGGAAATAGTCCTCAACCAACAAAGGAATGCAATAAACTTGTAGTCTAG
Protein sequenceShow/hide protein sequence
MESCHVSRMDSNELLCQVEIEPDKEGANVWGSTSALPRRLGSPITKKAKYGHYGSTWLGSDLLETRQVHSSVQVGAGDRQKVSKALDDVKSLADTKKPEEIQEMWEIAFN
TITLYLVDNVLRQVQKAATASKVTCYKLTGYNYLQWSQSVKMLMYGRELEDHITRKTRPPKPDDPKFCKWRAGNNQVMNWLINFMANELPTRFGKLFGIHSPDLLPKKMI
ANPEICAGLYLVRGNSPQPTKECNKLVV