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Moc03g05680 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g05680
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCACTA en-spm transposon protein
Genome locationchr3:4200090..4204480
RNA-Seq ExpressionMoc03g05680
SyntenyMoc03g05680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054757.1 uncharacterized protein E6C27_scaffold437G00350 [Cucumis melo var. makuwa]1.0e-0431.3Show/hide
Query:  NKHRVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYY--CRRRRVIIFKWTTGGYIGRSYTRYVEIDAEVARKRRIEVTIDPQYGRPVCENGTRMAIAIGS
        +  R TQ   IM   +   ++ N+YGVL E LDL Y  CRR           G   R Y R +E+D  V +  +I+  I+ + G+P+     ++ ++IG+
Subjt:  NKHRVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYY--CRRRRVIIFKWTTGGYIGRSYTRYVEIDAEVARKRRIEVTIDPQYGRPVCENGTRMAIAIGS

Query:  IVRENFDVVKYATWK
         VR N   +    WK
Subjt:  IVRENFDVVKYATWK

KAA0056292.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]6.7e-0432.28Show/hide
Query:  NKHRVTQNCRIMVPGD---GGRDDKNFYGVLTEVLDLYYCRRRRV------IIFKWTTGGYIGRS------------YTRYVEIDAEVARKRRIEVTIDP
        +  R TQN  IMV G+    G  D NFYGVL EVL + Y   R        I    ++G  +G S             +R +E++  V    RI +TI P
Subjt:  NKHRVTQNCRIMVPGD---GGRDDKNFYGVLTEVLDLYYCRRRRV------IIFKWTTGGYIGRS------------YTRYVEIDAEVARKRRIEVTIDP

Query:  QYGRPVCENGTRMAIAIGSIVRENFDV
           +P+  +  R + AIG  VR+ F +
Subjt:  QYGRPVCENGTRMAIAIGSIVRENFDV

TYK14986.1 uncharacterized protein E5676_scaffold45G00170 [Cucumis melo var. makuwa]3.9e-0428.47Show/hide
Query:  RVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYYCRRRRVIIFKWTTGGYIG---------------------------------RSYTRYVEIDAEVARK
        R TQ   IMVPG+    + N++G+L  VLDL Y   RRV +F    GG                                    R ++R + +D  V R 
Subjt:  RVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYYCRRRRVIIFKWTTGGYIG---------------------------------RSYTRYVEIDAEVARK

Query:  RRIEVTIDPQYGRPVCENGTRMAIAIGSIVRENFDVV
         +I++TID + G+PV    T+ +  IG+ +   F  V
Subjt:  RRIEVTIDPQYGRPVCENGTRMAIAIGSIVRENFDVV

XP_022158896.1 uncharacterized protein LOC111025354 [Momordica charantia]2.1e-0553.12Show/hide
Query:  INDILDDLRGPMVENDEEDEANFSHDIPTYEHEGDHSNEFEDLMNEATKDLYPG-YHNKHRVTQ
        +++ L+DLRGPMVE D+EDE +F+  +PT   E D+SNEFEDLM EATK+L    Y +KH  ++
Subjt:  INDILDDLRGPMVENDEEDEANFSHDIPTYEHEGDHSNEFEDLMNEATKDLYPG-YHNKHRVTQ

TrEMBL top hitse value%identityAlignment
A0A5A7UJI4 Uncharacterized protein5.0e-0531.3Show/hide
Query:  NKHRVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYY--CRRRRVIIFKWTTGGYIGRSYTRYVEIDAEVARKRRIEVTIDPQYGRPVCENGTRMAIAIGS
        +  R TQ   IM   +   ++ N+YGVL E LDL Y  CRR           G   R Y R +E+D  V +  +I+  I+ + G+P+     ++ ++IG+
Subjt:  NKHRVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYY--CRRRRVIIFKWTTGGYIGRSYTRYVEIDAEVARKRRIEVTIDPQYGRPVCENGTRMAIAIGS

Query:  IVRENFDVVKYATWK
         VR N   +    WK
Subjt:  IVRENFDVVKYATWK

A0A5D3C4A8 CACTA en-spm transposon protein3.2e-0432.28Show/hide
Query:  NKHRVTQNCRIMVPGD---GGRDDKNFYGVLTEVLDLYYCRRRRV------IIFKWTTGGYIGRS------------YTRYVEIDAEVARKRRIEVTIDP
        +  R TQN  IMV G+    G  D NFYGVL EVL + Y   R        I    ++G  +G S             +R +E++  V    RI +TI P
Subjt:  NKHRVTQNCRIMVPGD---GGRDDKNFYGVLTEVLDLYYCRRRRV------IIFKWTTGGYIGRS------------YTRYVEIDAEVARKRRIEVTIDP

Query:  QYGRPVCENGTRMAIAIGSIVRENFDV
           +P+  +  R + AIG  VR+ F +
Subjt:  QYGRPVCENGTRMAIAIGSIVRENFDV

A0A5D3CX15 Uncharacterized protein1.9e-0428.47Show/hide
Query:  RVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYYCRRRRVIIFKWTTGGYIG---------------------------------RSYTRYVEIDAEVARK
        R TQ   IMVPG+    + N++G+L  VLDL Y   RRV +F    GG                                    R ++R + +D  V R 
Subjt:  RVTQNCRIMVPGDGGRDDKNFYGVLTEVLDLYYCRRRRVIIFKWTTGGYIG---------------------------------RSYTRYVEIDAEVARK

Query:  RRIEVTIDPQYGRPVCENGTRMAIAIGSIVRENFDVV
         +I++TID + G+PV    T+ +  IG+ +   F  V
Subjt:  RRIEVTIDPQYGRPVCENGTRMAIAIGSIVRENFDVV

A0A6J1E2A8 uncharacterized protein LOC1110253541.0e-0553.12Show/hide
Query:  INDILDDLRGPMVENDEEDEANFSHDIPTYEHEGDHSNEFEDLMNEATKDLYPG-YHNKHRVTQ
        +++ L+DLRGPMVE D+EDE +F+  +PT   E D+SNEFEDLM EATK+L    Y +KH  ++
Subjt:  INDILDDLRGPMVENDEEDEANFSHDIPTYEHEGDHSNEFEDLMNEATKDLYPG-YHNKHRVTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAGTTAGGAATTTATAAGTTGAGGACAACTATGCCCTGTGGTGCTTCTGTCTATGATCAGTGTATGTATGAGCTTATGACTATTAAAGGTAGAGAGTATAATGA
TAACAGGGAATATGATGAGATAAATGATATTCTTGACGATTTGAGAGGTCCGATGGTAGAAAATGATGAAGAAGATGAAGCAAATTTTTCTCATGATATACCAACGTATG
AACACGAAGGGGACCATTCCAATGAATTTGAGGACTTGATGAACGAGGCAACTAAAGACTTGTACCCTGGTTATCACAACAAGCATCGGGTTACACAAAATTGTAGAATC
ATGGTACCTGGAGACGGTGGAAGAGATGATAAGAATTTCTATGGAGTTTTGACTGAAGTTTTAGACCTATACTATTGCAGAAGAAGACGTGTGATCATTTTTAAGTGGAC
CACTGGTGGGTATATTGGACGGTCTTACACTCGATATGTTGAGATAGATGCAGAGGTAGCACGTAAAAGAAGAATTGAAGTGACTATTGACCCTCAATATGGGAGGCCTG
TATGTGAAAATGGAACACGTATGGCAATTGCTATCGGTTCGATCGTCAGGGAAAATTTTGACGTAGTGAAGTACGCAACATGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAGTTAGGAATTTATAAGTTGAGGACAACTATGCCCTGTGGTGCTTCTGTCTATGATCAGTGTATGTATGAGCTTATGACTATTAAAGGTAGAGAGTATAATGA
TAACAGGGAATATGATGAGATAAATGATATTCTTGACGATTTGAGAGGTCCGATGGTAGAAAATGATGAAGAAGATGAAGCAAATTTTTCTCATGATATACCAACGTATG
AACACGAAGGGGACCATTCCAATGAATTTGAGGACTTGATGAACGAGGCAACTAAAGACTTGTACCCTGGTTATCACAACAAGCATCGGGTTACACAAAATTGTAGAATC
ATGGTACCTGGAGACGGTGGAAGAGATGATAAGAATTTCTATGGAGTTTTGACTGAAGTTTTAGACCTATACTATTGCAGAAGAAGACGTGTGATCATTTTTAAGTGGAC
CACTGGTGGGTATATTGGACGGTCTTACACTCGATATGTTGAGATAGATGCAGAGGTAGCACGTAAAAGAAGAATTGAAGTGACTATTGACCCTCAATATGGGAGGCCTG
TATGTGAAAATGGAACACGTATGGCAATTGCTATCGGTTCGATCGTCAGGGAAAATTTTGACGTAGTGAAGTACGCAACATGGAAGTAG
Protein sequenceShow/hide protein sequence
MSKLGIYKLRTTMPCGASVYDQCMYELMTIKGREYNDNREYDEINDILDDLRGPMVENDEEDEANFSHDIPTYEHEGDHSNEFEDLMNEATKDLYPGYHNKHRVTQNCRI
MVPGDGGRDDKNFYGVLTEVLDLYYCRRRRVIIFKWTTGGYIGRSYTRYVEIDAEVARKRRIEVTIDPQYGRPVCENGTRMAIAIGSIVRENFDVVKYATWK