; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g05800 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g05800
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr3:4266239..4270620
RNA-Seq ExpressionMoc03g05800
SyntenyMoc03g05800
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153251.1 uncharacterized protein LOC111020787 [Momordica charantia]6.2e-3987.13Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL
        QHLSTNLKD+FKDD +Q+MFI AAKAC+KSEFRYYFSQLAGFLEVQRY+E I FEKWTRAFQ GLRYDQMTSNIAESM AVLVHA SLPVTALLEHA AL
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL

Query:  L
        L
Subjt:  L

XP_022154930.1 uncharacterized protein LOC111022077 [Momordica charantia]2.4e-3077Show/hide
Query:  HLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASALL
        HLS NLKDKFK+D IQ MFI AAKA +KS FRYYFSQLAGF +VQRY+EGI FEKWTRAFQ  LRYDQMTSN AES+ AVL HA +LPVTALLE A AL+
Subjt:  HLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASALL

XP_022155392.1 uncharacterized protein LOC111022536 [Momordica charantia]2.2e-3683.17Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL
        QHL TNLKDKFKDD +Q+MFI AAKACRKSEFRYYFSQLAGF +VQRY+EGI FEKWTRAFQ GLRYDQMTSNI ESM AVLVHA SL VT LLEHA  L
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL

Query:  L
        L
Subjt:  L

XP_022156943.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Momordica charantia]3.8e-3683.17Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL
        QHLSTNLKDKFKDD +Q+MFI A KACRK EFRYYFSQLAGF +VQRY+EGI FEKWT AFQ GLRYDQMTSNIAESM AVLVHA  LPVT LLEHA AL
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL

Query:  L
        L
Subjt:  L

XP_022159182.1 uncharacterized protein LOC111025601 [Momordica charantia]3.9e-3380Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLE
        QHLSTNLKDKFK+D+IQ+ FI A K  +KSEFRYYFSQL GF EVQRY+EGI+F+KWTRAFQSGLRYDQMTS++AESM AVLVHA +LPVTALLE
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLE

TrEMBL top hitse value%identityAlignment
A0A6J1DK28 uncharacterized protein LOC1110207873.0e-3987.13Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL
        QHLSTNLKD+FKDD +Q+MFI AAKAC+KSEFRYYFSQLAGFLEVQRY+E I FEKWTRAFQ GLRYDQMTSNIAESM AVLVHA SLPVTALLEHA AL
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL

Query:  L
        L
Subjt:  L

A0A6J1DL12 uncharacterized protein LOC1110220771.1e-3077Show/hide
Query:  HLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASALL
        HLS NLKDKFK+D IQ MFI AAKA +KS FRYYFSQLAGF +VQRY+EGI FEKWTRAFQ  LRYDQMTSN AES+ AVL HA +LPVTALLE A AL+
Subjt:  HLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASALL

A0A6J1DP73 uncharacterized protein LOC1110225361.1e-3683.17Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL
        QHL TNLKDKFKDD +Q+MFI AAKACRKSEFRYYFSQLAGF +VQRY+EGI FEKWTRAFQ GLRYDQMTSNI ESM AVLVHA SL VT LLEHA  L
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL

Query:  L
        L
Subjt:  L

A0A6J1DS25 protein FAR-RED ELONGATED HYPOCOTYL 3-like1.8e-3683.17Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL
        QHLSTNLKDKFKDD +Q+MFI A KACRK EFRYYFSQLAGF +VQRY+EGI FEKWT AFQ GLRYDQMTSNIAESM AVLVHA  LPVT LLEHA AL
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLEHASAL

Query:  L
        L
Subjt:  L

A0A6J1DZ42 uncharacterized protein LOC1110256011.9e-3380Show/hide
Query:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLE
        QHLSTNLKDKFK+D+IQ+ FI A K  +KSEFRYYFSQL GF EVQRY+EGI+F+KWTRAFQSGLRYDQMTS++AESM AVLVHA +LPVTALLE
Subjt:  QHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAVLVHACSLPVTALLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTCCGAGCGGCGCCGCGTCACGACAACATCAGCGCAGTCGTCGCAAATCCGACGGTTTCAGGCACTACAACTTCGGCGACGTTCCTTCTAGTGGCAGCGTTCG
TTTGTCCGACGACATTTTCAAGCAGATCCGGCGTGTTCTATGGCGTTCCAGCATGTTTTACAGTGTCCCCACACCACTCCGATGGCCCACAGCAGTGACGTTCTTCGGTA
GTGGCAGATCCGGTGCGCCGACGCGATTTGCAGCACCCATAGTTACAGACTTTAATTGGAGTTACCTATTGCTTTTCAGCGTCGGGCCAGCAAGCCCAAGGCCATTGCAG
CTTGGTTTTGGGAGCCCGAACCCCCTCGACGTCGACCCACCCCTAACCCAAGAGCTTTTAGTGAAATCCTTCGGCAAGCTTAATAACGTGTCAGGGCACTTGTGTAGCTC
TCGGTTGTGGGTCAATGCACAGTTCAAGGCCTTGGGGATAAATGGCAAGGTCGAACGCCAAGCCTCTGTAGATGAGTGTCGGGCTTTGGGGATAAATGGCAAGGGCCGAT
GCGATTTAAAGGACATGATACGTTGTTTCCTTGATAAATATGCTGTTGTGCGTGACCCTTCAGATAAGGGCTGCTTACTGAGTACTGTGGTTGTACTCATCCCTCTTTTT
CCCCTTCAGTTTGCAGGTAGTCTTAGTAACGGTCCCTGTTTGGAAATGGTGAAATTCTTGGGGCGTTACACTGTCAGCTCGTTGAAGCAGCATTTGTCAACGAACCTTAA
GGACAAGTTCAAAGACGATGTCATTCAAAAAATGTTCATATTCGCAGCAAAGGCATGCCGGAAGTCGGAGTTCAGGTACTATTTTTCCCAACTAGCAGGATTTCTAGAGG
TCCAAAGGTATGTGGAAGGAATCAATTTTGAAAAATGGACTCGTGCATTTCAATCAGGTTTGAGGTACGACCAAATGACATCTAATATTGCAGAGTCTATGACTGCAGTC
CTCGTCCATGCATGTTCATTACCAGTCACTGCACTTCTTGAACATGCTTCAGCGCTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTCCGAGCGGCGCCGCGTCACGACAACATCAGCGCAGTCGTCGCAAATCCGACGGTTTCAGGCACTACAACTTCGGCGACGTTCCTTCTAGTGGCAGCGTTCG
TTTGTCCGACGACATTTTCAAGCAGATCCGGCGTGTTCTATGGCGTTCCAGCATGTTTTACAGTGTCCCCACACCACTCCGATGGCCCACAGCAGTGACGTTCTTCGGTA
GTGGCAGATCCGGTGCGCCGACGCGATTTGCAGCACCCATAGTTACAGACTTTAATTGGAGTTACCTATTGCTTTTCAGCGTCGGGCCAGCAAGCCCAAGGCCATTGCAG
CTTGGTTTTGGGAGCCCGAACCCCCTCGACGTCGACCCACCCCTAACCCAAGAGCTTTTAGTGAAATCCTTCGGCAAGCTTAATAACGTGTCAGGGCACTTGTGTAGCTC
TCGGTTGTGGGTCAATGCACAGTTCAAGGCCTTGGGGATAAATGGCAAGGTCGAACGCCAAGCCTCTGTAGATGAGTGTCGGGCTTTGGGGATAAATGGCAAGGGCCGAT
GCGATTTAAAGGACATGATACGTTGTTTCCTTGATAAATATGCTGTTGTGCGTGACCCTTCAGATAAGGGCTGCTTACTGAGTACTGTGGTTGTACTCATCCCTCTTTTT
CCCCTTCAGTTTGCAGGTAGTCTTAGTAACGGTCCCTGTTTGGAAATGGTGAAATTCTTGGGGCGTTACACTGTCAGCTCGTTGAAGCAGCATTTGTCAACGAACCTTAA
GGACAAGTTCAAAGACGATGTCATTCAAAAAATGTTCATATTCGCAGCAAAGGCATGCCGGAAGTCGGAGTTCAGGTACTATTTTTCCCAACTAGCAGGATTTCTAGAGG
TCCAAAGGTATGTGGAAGGAATCAATTTTGAAAAATGGACTCGTGCATTTCAATCAGGTTTGAGGTACGACCAAATGACATCTAATATTGCAGAGTCTATGACTGCAGTC
CTCGTCCATGCATGTTCATTACCAGTCACTGCACTTCTTGAACATGCTTCAGCGCTTTTATAA
Protein sequenceShow/hide protein sequence
MVVPSGAASRQHQRSRRKSDGFRHYNFGDVPSSGSVRLSDDIFKQIRRVLWRSSMFYSVPTPLRWPTAVTFFGSGRSGAPTRFAAPIVTDFNWSYLLLFSVGPASPRPLQ
LGFGSPNPLDVDPPLTQELLVKSFGKLNNVSGHLCSSRLWVNAQFKALGINGKVERQASVDECRALGINGKGRCDLKDMIRCFLDKYAVVRDPSDKGCLLSTVVVLIPLF
PLQFAGSLSNGPCLEMVKFLGRYTVSSLKQHLSTNLKDKFKDDVIQKMFIFAAKACRKSEFRYYFSQLAGFLEVQRYVEGINFEKWTRAFQSGLRYDQMTSNIAESMTAV
LVHACSLPVTALLEHASALL