CuGenDBv2

Gene ID	Moc03g06830
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	CCHC-type domain-containing protein
Genome location	chr3:4880519..4881277
RNA-Seq Expression	Moc03g06830
Synteny	Moc03g06830
Gene Ontology terms	GO:0009987 - cellular process (biological process) GO:0005488 - binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8660210.1 F-box family protein [Hibiscus syriacus]

1.6e-17

31.12

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM D++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D+ D  ++E+                   +G+     S +G+ +    
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE
        +S + + D  C+ C KKG  K+ CR   ++    +SAN+ E
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE

KAE8684911.1 Actin-depolymerizing factor 1 [Hibiscus syriacus]

9.7e-18

30.45

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM D++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D  D  ++E                    +     ++S +G+ +    
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAERV
        +S + + D  C+ C KKG  K+ CR   ++    +SAN+ E +
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAERV

KAE8691424.1 Callose synthase 12 [Hibiscus syriacus]

1.3e-19

32.37

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM D++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D+ D  ++E+                   +G+     S +G+ +   +
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE
        +S +   D  C+ C KKG  K+ CR L +D    +SANV E
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE

KAE8714488.1 hypothetical protein F3Y22_tig00110195pilonHSYRG00090 [Hibiscus syriacus]

3.0e-19

31.95

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM D++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D+ D  ++E                    +     + S +G+ +   +
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE
        +S +   D  C+ C KKG  K+ CR L +D    +SANV E
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE

KAE8728571.1 hypothetical protein F3Y22_tig00004205pilonHSYRG00041 [Hibiscus syriacus]

1.1e-18

31.95

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM +++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D+ D  ++E+                   +G+     S +G+ +    
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE
        +S + + D  C+ C KKG  K+ CR L +D    +SANV E
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE

TrEMBL top hits

e value

%identity

Alignment

A0A6A2YZ69 Actin-depolymerizing factor 1

4.7e-18

30.45

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM D++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D  D  ++E                    +     ++S +G+ +    
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAERV
        +S + + D  C+ C KKG  K+ CR   ++    +SAN+ E +
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAERV

A0A6A2ZHE4 Callose synthase 12

6.5e-20

32.37

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM D++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D+ D  ++E+                   +G+     S +G+ +   +
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE
        +S +   D  C+ C KKG  K+ CR L +D    +SANV E
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE

A0A6A3BGE7 Uncharacterized protein

1.5e-19

31.95

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM D++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D+ D  ++E                    +     + S +G+ +   +
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAE--------------------KNVHKGKMSYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE
        +S +   D  C+ C KKG  K+ CR L +D    +SANV E
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE

A0A6A3CMG8 Uncharacterized protein

5.5e-19

31.95

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    KN+++ L  +   GM +++W  +D QA+ +I L  + NV   +A +KT  GLM AL  MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ
                L S+EI   +EV+A+ LLSSLPDSW        + SG   LKF D+ D  ++E+                   +G+     S +G+ +    
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAAIAEK----------------NVHKGKM----SYKGKQQYCNQ

Query:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE
        +S + + D  C+ C KKG  K+ CR L +D    +SANV E
Subjt:  RSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAE

A0A803LCG4 Uncharacterized protein

6.1e-18

33.33

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------
        MQI D    K +++ L+E+   GM + EWK +D QA+ +I L  + NV   +A + T  GLMKAL +MYEK SA+NK                       
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNK-----------------------

Query:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAA--IAEKNVHKGKMSYKG-----KQQYCNQRSGSNSGDVECFY
                L S+EI   +EV A+ LLSSLPDSW     T  + SG   LKF D+      +  +N  +G+ +Y+G     + +  N  +  NS  VEC+ 
Subjt:  --------LESMEITSSEEVKAIKLLSSLPDSWETMKRTGPNLSGVKSLKFLDICDAA--IAEKNVHKGKMSYKG-----KQQYCNQRSGSNSGDVECFY

Query:  CHKKGRIKQFCRKLTEDQQKGDSANVAERVE
        C K G  K  C+   + ++    ANV    E
Subjt:  CHKKGRIKQFCRKLTEDQQKGDSANVAERVE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G29785.1 unknown protein

9.0e-06

37.5

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Query:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNKLESMEITSSEE
        M+I D    K +H+ L +++ T MS  +W  +  Q + +I L  + N+   VA +K+  GLMK L D+Y+K S NN + S E T S E
Subjt:  MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNKLESMEITSSEE

Sequences

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CDS sequence

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ATGCAAATTACAGATCTTCCTACATACAAGAATATTCATAAAACCCTGAAAGAACAACTGGCCACTGGAATGTCAGATAAAGAGTGGAAAGAGATGGATGAACAA
GCAGTAGCAATCATCAGTCTATGTTCGACGATGAATGTGGTGAGTCTCGTGGCGAGCCAGAAAACAGCAATGGGACTGATGAAGGCTTTGATTGACATGTATGAA
AAACTTTCTGCCAACAACAAGTTAGAGTCTATGGAGATAACTTCTTCAGAGGAGGTGAAGGCTATAAAACTGCTATCCTCTTTGCCTGACAGTTGGGAGACGATG
AAAAGGACAGGGCCAAATTTGTCGGGAGTTAAGAGTTTGAAATTTTTAGATATCTGTGACGCTGCAATTGCTGAGAAGAACGTGCACAAAGGGAAGATGAGTTAT
AAGGGAAAGCAACAGTATTGCAACCAGAGGAGTGGAAGTAATAGTGGAGATGTGGAATGTTTTTACTGCCACAAGAAGGGACGCATTAAGCAGTTTTGTAGGAAG
CTTACAGAGGATCAACAGAAGGGTGATTCTGCTAATGTGGCAGAAAGAGTAGAATAG

mRNA sequence

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Protein sequence

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MQITDLPTYKNIHKTLKEQLATGMSDKEWKEMDEQAVAIISLCSTMNVVSLVASQKTAMGLMKALIDMYEKLSANNKLESMEITSSEEVKAIKLLSSLPDSWETM
KRTGPNLSGVKSLKFLDICDAAIAEKNVHKGKMSYKGKQQYCNQRSGSNSGDVECFYCHKKGRIKQFCRKLTEDQQKGDSANVAERVE

Moc03g06830 (gene) of Bitter gourd (OHB3-1) v2 genome