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Moc03g07010 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g07010
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111019515
Genome locationchr3:4978299..4979213
RNA-Seq ExpressionMoc03g07010
SyntenyMoc03g07010
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]1.5e-1327.42Show/hide
Query:  DQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYA--AVHPQSHIAIVRGKEIRFDATQINYTFNIKNI------------------RDVVRLKP
        D+  G +P    E  + + W  L +       ++V+EFYA    H       VR  +++F    IN+ + +KN+                  R V R K 
Subjt:  DQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYA--AVHPQSHIAIVRGKEIRFDATQINYTFNIKNI------------------RDVVRLKP

Query:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ
         D+          +++ +LPT HD  V+++R  ++Y ++KG  +N G++I   I ECAHR  GKL+   L+T  C    V +  D+
Subjt:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ

PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]1.9e-1631.55Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK
        T R+++W+  I   +   L LVREFYA A   ++   +VRG+E+ FD+  IN  +NI  I                                  + V  K
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK

Query:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ
           +  AA  WL+ +  R+LPT H   VT DRALL+Y ++ G   + G++I+ SI + A+ +   L+ P L+T LC R GV+  E +
Subjt:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ

PIN07564.1 hypothetical protein CDL12_19862 [Handroanthus impetiginosus]5.3e-1428.88Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK
        T  +++W+  I   +   L L REFYA A   ++   +VRG+E+ FD   IN  +NI  I                                  + +  K
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK

Query:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ
           +  AA  WL+ +  ++LPT H   VT D+ALL+Y ++ G   + G++I+ SI + A+ +   L+ P L+T LC R GV+  E +
Subjt:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ

XP_022151603.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111019515 [Momordica charantia]4.2e-3591.46Show/hide
Query:  MTKLGFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVV
        MT+LGFD TLGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIRFDATQINYTFNIKNI+D V
Subjt:  MTKLGFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVV

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]3.9e-1731.29Show/hide
Query:  GFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVVR------------------LKP
        GFD+    VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R    +I    + + + +  R                  LKP
Subjt:  GFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVVR------------------LKP

Query:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHG
         D++  A  W+Y+VKNR++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +  G
Subjt:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHG

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein9.4e-1731.55Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK
        T R+++W+  I   +   L LVREFYA A   ++   +VRG+E+ FD+  IN  +NI  I                                  + V  K
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK

Query:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ
           +  AA  WL+ +  R+LPT H   VT DRALL+Y ++ G   + G++I+ SI + A+ +   L+ P L+T LC R GV+  E +
Subjt:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ

A0A2G9GQI5 Uncharacterized protein2.6e-1428.88Show/hide
Query:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK
        T  +++W+  I   +   L L REFYA A   ++   +VRG+E+ FD   IN  +NI  I                                  + +  K
Subjt:  TARDKEWRPLIQPIQCEALELVREFYA-AVHPQSHIAIVRGKEIRFDATQINYTFNIKNIR---------------------------------DVVRLK

Query:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ
           +  AA  WL+ +  ++LPT H   VT D+ALL+Y ++ G   + G++I+ SI + A+ +   L+ P L+T LC R GV+  E +
Subjt:  PEDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ

A0A6J1DCL7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110195152.0e-3591.46Show/hide
Query:  MTKLGFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVV
        MT+LGFD TLGDVPDDWR+TAR KEWRPLIQPIQCEALELVREFYAA HPQSHIAIVRGKEIRFDATQINYTFNIKNI+D V
Subjt:  MTKLGFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVV

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.9e-1731.29Show/hide
Query:  GFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVVR------------------LKP
        GFD+    VP+  R+   +  W  L  PI   +  LV+EFY A++P       RG E+R    +I    + + + +  R                  LKP
Subjt:  GFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVVR------------------LKP

Query:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHG
         D++  A  W+Y+VKNR++PT +D  + ++RA++VY ++KG++ N+GELI   I  C+ +  G
Subjt:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHG

A0A803Q715 Uncharacterized protein7.5e-1427.42Show/hide
Query:  DQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYA--AVHPQSHIAIVRGKEIRFDATQINYTFNIKNI------------------RDVVRLKP
        D+  G +P    E  + + W  L +       ++V+EFYA    H       VR  +++F    IN+ + +KN+                  R V R K 
Subjt:  DQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYA--AVHPQSHIAIVRGKEIRFDATQINYTFNIKNI------------------RDVVRLKP

Query:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ
         D+          +++ +LPT HD  V+++R  ++Y ++KG  +N G++I   I ECAHR  GKL+   L+T  C    V +  D+
Subjt:  EDVSLAAAGWLYIVKNRILPTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAATTGGGATTCGACCAAACTTTAGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGATAAAGAATGGAGACCACTCATTCAGCCCATACAATGT
GAGGCTTTGGAGTTAGTCAGAGAGTTCTATGCTGCTGTCCATCCCCAGTCACATATAGCCATAGTGCGTGGGAAAGAAATAAGGTTTGATGCCACTCAGATCAAC
TACACCTTCAACATTAAGAATATCAGAGATGTTGTACGACTAAAACCCGAGGATGTTTCACTAGCTGCTGCAGGATGGTTATACATAGTCAAAAACAGAATTCTG
CCAACGGAGCATGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATC
CATGAGTGTGCCCACCGGACACATGGTAAGCTTTATCACCCACGCTTGGTCACTTCTTTATGCTTGCGACAAGGTGTACAGCTCCCTGAGGATCAAATTAAAAGA
GATGCCCCAATTATGGAAGAGAAGAATATTTGGCGAATTATCGCCCAAGCGCTACAAAGAAGGGAAGGTACTGGGACGTCTCCTACATCGGAGATCCGTCGTCTT
CGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAAAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCA
GCGCTAGCTGCTATCCTTGGTCATCCATCGTCCAGTACCGACACTGATCCTAGTCCACAACCTCCAACTTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAATTGGGATTCGACCAAACTTTAGGAGATGTGCCTGATGATTGGAGGGAGACCGCTAGAGATAAAGAATGGAGACCACTCATTCAGCCCATACAATGT
GAGGCTTTGGAGTTAGTCAGAGAGTTCTATGCTGCTGTCCATCCCCAGTCACATATAGCCATAGTGCGTGGGAAAGAAATAAGGTTTGATGCCACTCAGATCAAC
TACACCTTCAACATTAAGAATATCAGAGATGTTGTACGACTAAAACCCGAGGATGTTTCACTAGCTGCTGCAGGATGGTTATACATAGTCAAAAACAGAATTCTG
CCAACGGAGCATGATGAGCATGTCACTCAGGATAGGGCACTGCTGGTTTATGCCATGCTAAAGGGCATAGATGTGAATTATGGAGAATTGATCAATACCAGTATC
CATGAGTGTGCCCACCGGACACATGGTAAGCTTTATCACCCACGCTTGGTCACTTCTTTATGCTTGCGACAAGGTGTACAGCTCCCTGAGGATCAAATTAAAAGA
GATGCCCCAATTATGGAAGAGAAGAATATTTGGCGAATTATCGCCCAAGCGCTACAAAGAAGGGAAGGTACTGGGACGTCTCCTACATCGGAGATCCGTCGTCTT
CGAGAGGAGAACCAACAGCTGCGAGATCAGGTTCGAAAAGTCGTGCAACATATCTACAACTTGAGGGCTTCATTGGATTTTGCGGTTTTACCTTCATGGCCTCCA
GCGCTAGCTGCTATCCTTGGTCATCCATCGTCCAGTACCGACACTGATCCTAGTCCACAACCTCCAACTTCGTGA
Protein sequenceShow/hide protein sequence
MTKLGFDQTLGDVPDDWRETARDKEWRPLIQPIQCEALELVREFYAAVHPQSHIAIVRGKEIRFDATQINYTFNIKNIRDVVRLKPEDVSLAAAGWLYIVKNRIL
PTEHDEHVTQDRALLVYAMLKGIDVNYGELINTSIHECAHRTHGKLYHPRLVTSLCLRQGVQLPEDQIKRDAPIMEEKNIWRIIAQALQRREGTGTSPTSEIRRL
REENQQLRDQVRKVVQHIYNLRASLDFAVLPSWPPALAAILGHPSSSTDTDPSPQPPTS