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Moc03g07050 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g07050
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:5000441..5001569
RNA-Seq ExpressionMoc03g07050
SyntenyMoc03g07050
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156048.1 uncharacterized protein LOC111023016 [Momordica charantia]7.1e-2163.54Show/hide
Query:  MESKNDPKRDKELKHEIIDWGRQVRDVTGWPKERPNAGVENEESDRRRTNRAERAQSRPLLGPDPFSVPTTSRSRPLLSPRPAHESPTYDLRSFEP
        ME+KNDPKRDKELK EIIDWGR  RDVTG PKERPNAG +NEESD RRTNRAERA+SRP+LG                 PRP+  SP +D R F P
Subjt:  MESKNDPKRDKELKHEIIDWGRQVRDVTGWPKERPNAGVENEESDRRRTNRAERAQSRPLLGPDPFSVPTTSRSRPLLSPRPAHESPTYDLRSFEP
XP_022156571.1 uncharacterized protein LOC111023448 [Momordica charantia]9.6e-1881.54Show/hide
Query:  GEPATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
        G P   L +AT+LSG+AR SPGHRLNSTTLDR EPAEEVESVPLTAEDRRVNIGTKLG+EERE+L
Subjt:  GEPATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
XP_022158042.1 uncharacterized protein LOC111024621 [Momordica charantia]1.9e-0549.32Show/hide
Query:  GRSLGGE---PATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
        G  +GG    P T    A +  GE  SSP    + T  DR EP +EVES+PLT++DRRVNIGT+LGN++R +L
Subjt:  GRSLGGE---PATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
TrEMBL top hitse value%identityAlignment
A0A6J1DPJ5 uncharacterized protein LOC1110230163.4e-2163.54Show/hide
Query:  MESKNDPKRDKELKHEIIDWGRQVRDVTGWPKERPNAGVENEESDRRRTNRAERAQSRPLLGPDPFSVPTTSRSRPLLSPRPAHESPTYDLRSFEP
        ME+KNDPKRDKELK EIIDWGR  RDVTG PKERPNAG +NEESD RRTNRAERA+SRP+LG                 PRP+  SP +D R F P
Subjt:  MESKNDPKRDKELKHEIIDWGRQVRDVTGWPKERPNAGVENEESDRRRTNRAERAQSRPLLGPDPFSVPTTSRSRPLLSPRPAHESPTYDLRSFEP
A0A6J1DVC6 Ribonuclease H4.6e-1881.54Show/hide
Query:  GEPATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
        G P   L +AT+LSG+AR SPGHRLNSTTLDR EPAEEVESVPLTAEDRRVNIGTKLG+EERE+L
Subjt:  GEPATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
A0A6J1DW49 uncharacterized protein LOC1110246219.1e-0649.32Show/hide
Query:  GRSLGGE---PATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
        G  +GG    P T    A +  GE  SSP    + T  DR EP +EVES+PLT++DRRVNIGT+LGN++R +L
Subjt:  GRSLGGE---PATRLSEATNLSGEARSSPGHRLNSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAAAAACGACCCGAAACGGGACAAGGAGTTGAAGCATGAGATCATCGATTGGGGGAGACAGGTCCGTGACGTAACGGGCTGGCCCAAAGAACGACCC
AACGCCGGGGTAGAGAACGAGGAAAGCGACCGGCGGAGAACTAACCGGGCCGAGAGGGCTCAGTCCCGACCCCTGCTCGGTCCCGACCCCTTCTCGGTCCCGACC
ACTTCTCGGTCCCGACCCCTGCTCAGCCCACGCCCAGCCCATGAATCTCCCACCTACGATCTACGATCCTTCGAGCCCTGCAACGTCGAATTAGGATTTGGCTAC
GGAGGTTCTGGAATCATGTATCGGTTCCCTTATCATCGAGTTTGGTGTGTGCGAGAAGAAGAGCCGAAGGGTCAAAATCCACGCATCAACAATTGGCCCGTCTGT
AGGGATGATACAGTAAAGCGAGCTTCATCGAAGCGAAATCCCGATCTGAGGCGAAATTTTGATCCAAGGCATGTAGAGTGCAGCGGCCGACCATTCAGGCGAGAA
GAGCCTGAAAGAAGTGGCCGATCACTCGGGGGAGAACCAGCGACGAGGCTGAGTGAAGCGACCAACCTCTCGGGTGAGGCAAGGTCGAGCCCTGGTCATCGACTT
AATTCGACCACCCTTGACAGGGAAGAACCGGCTGAGGAGGTAGAATCAGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAATGAG
GAAAGAGAAACCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAAAAACGACCCGAAACGGGACAAGGAGTTGAAGCATGAGATCATCGATTGGGGGAGACAGGTCCGTGACGTAACGGGCTGGCCCAAAGAACGACCC
AACGCCGGGGTAGAGAACGAGGAAAGCGACCGGCGGAGAACTAACCGGGCCGAGAGGGCTCAGTCCCGACCCCTGCTCGGTCCCGACCCCTTCTCGGTCCCGACC
ACTTCTCGGTCCCGACCCCTGCTCAGCCCACGCCCAGCCCATGAATCTCCCACCTACGATCTACGATCCTTCGAGCCCTGCAACGTCGAATTAGGATTTGGCTAC
GGAGGTTCTGGAATCATGTATCGGTTCCCTTATCATCGAGTTTGGTGTGTGCGAGAAGAAGAGCCGAAGGGTCAAAATCCACGCATCAACAATTGGCCCGTCTGT
AGGGATGATACAGTAAAGCGAGCTTCATCGAAGCGAAATCCCGATCTGAGGCGAAATTTTGATCCAAGGCATGTAGAGTGCAGCGGCCGACCATTCAGGCGAGAA
GAGCCTGAAAGAAGTGGCCGATCACTCGGGGGAGAACCAGCGACGAGGCTGAGTGAAGCGACCAACCTCTCGGGTGAGGCAAGGTCGAGCCCTGGTCATCGACTT
AATTCGACCACCCTTGACAGGGAAGAACCGGCTGAGGAGGTAGAATCAGTCCCTCTGACAGCCGAAGATCGACGGGTCAACATCGGAACCAAGTTGGGGAATGAG
GAAAGAGAAACCTTATAA
Protein sequenceShow/hide protein sequence
MESKNDPKRDKELKHEIIDWGRQVRDVTGWPKERPNAGVENEESDRRRTNRAERAQSRPLLGPDPFSVPTTSRSRPLLSPRPAHESPTYDLRSFEPCNVELGFGY
GGSGIMYRFPYHRVWCVREEEPKGQNPRINNWPVCRDDTVKRASSKRNPDLRRNFDPRHVECSGRPFRREEPERSGRSLGGEPATRLSEATNLSGEARSSPGHRL
NSTTLDREEPAEEVESVPLTAEDRRVNIGTKLGNEERETL