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Moc03g07080 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g07080
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionDNA-directed DNA polymerase
Genome locationchr3:5016171..5018299
RNA-Seq ExpressionMoc03g07080
SyntenyMoc03g07080
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143500.1 uncharacterized protein LOC111013378 [Momordica charantia]2.5e-4660.75Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAG-----------------------------------------
        M LSVYKR+G+ +VRPTTVTLQLA+ SIAN EGKI+ VLVQVDKFIF ADFIVL F+AG                                         
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAG-----------------------------------------

Query:  SMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDIGLDEGKEAV
        SMKYPSDA E A+LRVLDEA+ +S SAEAMLE+QNGEVD VLEQ DEICQEILY DCTSDLARSWSRVHESL LEDIG  + K ++
Subjt:  SMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDIGLDEGKEAV

XP_022143562.1 uncharacterized protein LOC111013431 [Momordica charantia]8.7e-2356.45Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLV------------QVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEA
        M LSV KR+GMG+VRPT VTLQLADRSIAN E KI+DVL             Q +  +   D  +      SMKYPSDAEECA LRVLDEA+    S E 
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLV------------QVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEA

Query:  MLEQQNGEVDIVLEQVDEICQEIL
        MLE QN E++ ++EQ DEICQEIL
Subjt:  MLEQQNGEVDIVLEQVDEICQEIL

XP_022150853.1 uncharacterized protein LOC111018898 [Momordica charantia]3.3e-2251.97Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIV
        M LSVYKR+GMG VRPTTVTLQL+DRSIAN EGKI  V+VQVDKFIFPADFIVL F+A         E+  I+                L      VD+V
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIV

Query:  --LEQVDEICQEILYL-DCTS----DLARSWSRVHESLDLEDIGLDEGKEAV
          L  +   C  I+   D T     DLARSWSRVHESLDLEDIG  + K ++
Subjt:  --LEQVDEICQEILYL-DCTS----DLARSWSRVHESLDLEDIGLDEGKEAV

XP_022155972.1 uncharacterized protein LOC111022956 [Momordica charantia]1.3e-1843.94Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS----------------------------------------
        M LSVYK++GMGK R TT+T+QLADRSI + EGKI+DVLVQVDKFIFPADFI+L ++A                                          
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS----------------------------------------

Query:  -MKYPSDAEECAILRVLDEAIHESFSAEAMLE
         MKY ++ EEC +L++LDE + E+ ++E MLE
Subjt:  -MKYPSDAEECAILRVLDEAIHESFSAEAMLE

XP_022158578.1 uncharacterized protein LOC111025032 [Momordica charantia]2.4e-4165.36Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS-----------------MKYPSDAEECAILRVLDEAIHES
        M L V+KR+GM KVRPTTVT QLADRSIAN EGKI+DVLVQVDKFIFP DFIVL F+A                   M     A E  +LRVLDEA+ ES
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS-----------------MKYPSDAEECAILRVLDEAIHES

Query:  FSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDI
         SAE MLEQ N EVD +L++VDEICQEILYLDC  DLARSWS VHESL+LEDI
Subjt:  FSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDI

TrEMBL top hitse value%identityAlignment
A0A6J1CNZ2 uncharacterized protein LOC1110133781.2e-4660.75Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAG-----------------------------------------
        M LSVYKR+G+ +VRPTTVTLQLA+ SIAN EGKI+ VLVQVDKFIF ADFIVL F+AG                                         
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAG-----------------------------------------

Query:  SMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDIGLDEGKEAV
        SMKYPSDA E A+LRVLDEA+ +S SAEAMLE+QNGEVD VLEQ DEICQEILY DCTSDLARSWSRVHESL LEDIG  + K ++
Subjt:  SMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDIGLDEGKEAV

A0A6J1CR66 uncharacterized protein LOC1110134314.2e-2356.45Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLV------------QVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEA
        M LSV KR+GMG+VRPT VTLQLADRSIAN E KI+DVL             Q +  +   D  +      SMKYPSDAEECA LRVLDEA+    S E 
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLV------------QVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEA

Query:  MLEQQNGEVDIVLEQVDEICQEIL
        MLE QN E++ ++EQ DEICQEIL
Subjt:  MLEQQNGEVDIVLEQVDEICQEIL

A0A6J1DAJ9 uncharacterized protein LOC1110188981.6e-2251.97Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIV
        M LSVYKR+GMG VRPTTVTLQL+DRSIAN EGKI  V+VQVDKFIFPADFIVL F+A         E+  I+                L      VD+V
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIV

Query:  --LEQVDEICQEILYL-DCTS----DLARSWSRVHESLDLEDIGLDEGKEAV
          L  +   C  I+   D T     DLARSWSRVHESLDLEDIG  + K ++
Subjt:  --LEQVDEICQEILYL-DCTS----DLARSWSRVHESLDLEDIGLDEGKEAV

A0A6J1DQT7 uncharacterized protein LOC1110229566.3e-1943.94Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS----------------------------------------
        M LSVYK++GMGK R TT+T+QLADRSI + EGKI+DVLVQVDKFIFPADFI+L ++A                                          
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS----------------------------------------

Query:  -MKYPSDAEECAILRVLDEAIHESFSAEAMLE
         MKY ++ EEC +L++LDE + E+ ++E MLE
Subjt:  -MKYPSDAEECAILRVLDEAIHESFSAEAMLE

A0A6J1DWH3 uncharacterized protein LOC1110250321.2e-4165.36Show/hide
Query:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS-----------------MKYPSDAEECAILRVLDEAIHES
        M L V+KR+GM KVRPTTVT QLADRSIAN EGKI+DVLVQVDKFIFP DFIVL F+A                   M     A E  +LRVLDEA+ ES
Subjt:  MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGS-----------------MKYPSDAEECAILRVLDEAIHES

Query:  FSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDI
         SAE MLEQ N EVD +L++VDEICQEILYLDC  DLARSWS VHESL+LEDI
Subjt:  FSAEAMLEQQNGEVDIVLEQVDEICQEILYLDCTSDLARSWSRVHESLDLEDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTGTCAGTATACAAGAGGATGGGCATGGGAAAAGTGAGGCCAACGACAGTCACACTGCAGCTAGCAGATCGCTCAATTGCAAACTCTGAAGGAAAAATC
GACGATGTTCTGGTACAAGTGGATAAGTTTATATTTCCAGCTGATTTTATTGTTCTTCATTTTAATGCAGGCTCTATGAAGTACCCTTCTGATGCTGAAGAGTGT
GCAATCTTGCGAGTACTAGACGAAGCTATACATGAGTCATTCAGTGCAGAGGCAATGCTAGAGCAGCAGAACGGTGAAGTGGATATTGTGTTGGAGCAAGTAGAT
GAAATATGCCAAGAAATTCTCTATTTGGATTGCACTAGTGATTTAGCAAGATCATGGTCAAGAGTCCACGAGAGCCTAGACTTAGAGGACATTGGACTAGACGAG
GGTAAGGAAGCTGTAGCCATCAGAGAGAGCTTCCCATATGAGCAGTTGCTGACCTTGTCGCATACAGATGCTAAGGAGGAACAGCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTGTCAGTATACAAGAGGATGGGCATGGGAAAAGTGAGGCCAACGACAGTCACACTGCAGCTAGCAGATCGCTCAATTGCAAACTCTGAAGGAAAAATC
GACGATGTTCTGGTACAAGTGGATAAGTTTATATTTCCAGCTGATTTTATTGTTCTTCATTTTAATGCAGGCTCTATGAAGTACCCTTCTGATGCTGAAGAGTGT
GCAATCTTGCGAGTACTAGACGAAGCTATACATGAGTCATTCAGTGCAGAGGCAATGCTAGAGCAGCAGAACGGTGAAGTGGATATTGTGTTGGAGCAAGTAGAT
GAAATATGCCAAGAAATTCTCTATTTGGATTGCACTAGTGATTTAGCAAGATCATGGTCAAGAGTCCACGAGAGCCTAGACTTAGAGGACATTGGACTAGACGAG
GGTAAGGAAGCTGTAGCCATCAGAGAGAGCTTCCCATATGAGCAGTTGCTGACCTTGTCGCATACAGATGCTAAGGAGGAACAGCCCTAG
Protein sequenceShow/hide protein sequence
MLLSVYKRMGMGKVRPTTVTLQLADRSIANSEGKIDDVLVQVDKFIFPADFIVLHFNAGSMKYPSDAEECAILRVLDEAIHESFSAEAMLEQQNGEVDIVLEQVD
EICQEILYLDCTSDLARSWSRVHESLDLEDIGLDEGKEAVAIRESFPYEQLLTLSHTDAKEEQP