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Moc03g07660 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g07660
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:5336049..5337146
RNA-Seq ExpressionMoc03g07660
SyntenyMoc03g07660
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151719.1 uncharacterized protein LOC111019634 [Momordica charantia]6.7e-7864.93Show/hide
Query:  MVQPANSANTTEQRGLNADNDPQRDLD-ARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYK
        MVQ A + + +E R    D   QR      + + H   G++ +       H   +L        + +  R++ +S     SPS S    NS+ +A+S Y 
Subjt:  MVQPANSANTTEQRGLNADNDPQRDLD-ARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYK

Query:  PLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAF
        P+TPE VITREEFD +K +FD QVEALKAKCEKKE SFDDGDLGESPFTSDILE  IP KFKTPTMK YD SKDPKDYVEVFEGLMDFQAATDAIKC  F
Subjt:  PLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAF

Query:  QIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        QIALTGSARLWYRRLPARSISTYSQLRKEFI QF SRHYDRKTATHL TIRQKEGETLREYVTRFQEE
Subjt:  QIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

XP_022152854.1 uncharacterized protein LOC111020479 [Momordica charantia]2.6e-8266.67Show/hide
Query:  MVQPANSANTTEQRGLNADNDPQRDLDARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYKP
        MVQPANS NT ++R L A++  QR++ A +VE         +   RSAR     L PAHPKPS                             KA+S Y P
Subjt:  MVQPANSANTTEQRGLNADNDPQRDLDARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYKP

Query:  LTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQ
        +TP  VITREEFD +K +FD QVEALKA+CEKKE SFDDGDLGE  F+SDILE  IPPKFKTPTMK YD SKDPKDYVEVFE LMDFQAATDAIKC AFQ
Subjt:  LTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQ

Query:  IALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        IALTGSARLWYRRLPAR ISTYSQLRKEFISQF SRHYDRKT THLATIRQKEGETLREYVTRF EE
Subjt:  IALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]4.1e-8387.3Show/hide
Query:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY
        ++K+AS E EDS SYSREFSNS+ KAQSKYKPL PEAVI REEFDLMKHRFDEQVEALKA+CEKKE  FDD DLGESPFTSDI+E PIPPKFKTPTMK Y
Subjt:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY

Query:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETL
        D SKDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLW RRLPARSISTYSQLRKEFI QF  RHYDRKTATHLATIRQKE ETL
Subjt:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETL

XP_022156088.1 uncharacterized protein LOC111023060 [Momordica charantia]1.0e-7877.89Show/hide
Query:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY
        R++ +S   E + +Y  +  NS+ +A+S Y P+ PE VITREEF+ +K +FD QVEALK +CEKKE +FDDGDLGESPFTSDILE  IPPKFKTPTMK Y
Subjt:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY

Query:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        D SKDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKT THLATIRQKEG+TL+EY+TRFQEE
Subjt:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]1.6e-103100Show/hide
Query:  RASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRS
        RASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRS
Subjt:  RASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRS

Query:  KDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        KDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
Subjt:  KDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

TrEMBL top hitse value%identityAlignment
A0A6J1DDW5 uncharacterized protein LOC1110196343.3e-7864.93Show/hide
Query:  MVQPANSANTTEQRGLNADNDPQRDLD-ARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYK
        MVQ A + + +E R    D   QR      + + H   G++ +       H   +L        + +  R++ +S     SPS S    NS+ +A+S Y 
Subjt:  MVQPANSANTTEQRGLNADNDPQRDLD-ARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYK

Query:  PLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAF
        P+TPE VITREEFD +K +FD QVEALKAKCEKKE SFDDGDLGESPFTSDILE  IP KFKTPTMK YD SKDPKDYVEVFEGLMDFQAATDAIKC  F
Subjt:  PLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAF

Query:  QIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        QIALTGSARLWYRRLPARSISTYSQLRKEFI QF SRHYDRKTATHL TIRQKEGETLREYVTRFQEE
Subjt:  QIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

A0A6J1DHB3 uncharacterized protein LOC1110204791.3e-8266.67Show/hide
Query:  MVQPANSANTTEQRGLNADNDPQRDLDARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYKP
        MVQPANS NT ++R L A++  QR++ A +VE         +   RSAR     L PAHPKPS                             KA+S Y P
Subjt:  MVQPANSANTTEQRGLNADNDPQRDLDARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYKP

Query:  LTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQ
        +TP  VITREEFD +K +FD QVEALKA+CEKKE SFDDGDLGE  F+SDILE  IPPKFKTPTMK YD SKDPKDYVEVFE LMDFQAATDAIKC AFQ
Subjt:  LTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQ

Query:  IALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        IALTGSARLWYRRLPAR ISTYSQLRKEFISQF SRHYDRKT THLATIRQKEGETLREYVTRF EE
Subjt:  IALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

A0A6J1DPC9 uncharacterized protein LOC1110222802.0e-8387.3Show/hide
Query:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY
        ++K+AS E EDS SYSREFSNS+ KAQSKYKPL PEAVI REEFDLMKHRFDEQVEALKA+CEKKE  FDD DLGESPFTSDI+E PIPPKFKTPTMK Y
Subjt:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY

Query:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETL
        D SKDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLW RRLPARSISTYSQLRKEFI QF  RHYDRKTATHLATIRQKE ETL
Subjt:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETL

A0A6J1DPN4 uncharacterized protein LOC1110230605.0e-7977.89Show/hide
Query:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY
        R++ +S   E + +Y  +  NS+ +A+S Y P+ PE VITREEF+ +K +FD QVEALK +CEKKE +FDDGDLGESPFTSDILE  IPPKFKTPTMK Y
Subjt:  REKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLY

Query:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        D SKDPKDYVEVFEGLMDFQAATDAIKC AFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKT THLATIRQKEG+TL+EY+TRFQEE
Subjt:  DRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

A0A6J1DVR0 uncharacterized protein LOC1110245037.7e-104100Show/hide
Query:  RASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRS
        RASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRS
Subjt:  RASRESEDSPSYSREFSNSDFKAQSKYKPLTPEAVITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRS

Query:  KDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
        KDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE
Subjt:  KDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLWYRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGCCAGCAAACTCTGCTAATACGACGGAACAGAGGGGTTTGAACGCTGATAACGACCCTCAGCGAGACCTTGACGCTAGAATAGTCGAGGACCACGTT
CGAGCAGGACAAGAGGGAGATCTGCCACGGAGATCTGCCCGCCATGCGAACCAGGAGTTACTCCCTGCTCACCCGAAACCTTCAAAAGCCAACCGAGGTCGAGAA
AAGAGAGCATCGCGAGAGTCGGAAGACTCTCCGTCCTACTCCCGAGAGTTCTCCAACTCTGACTTCAAGGCTCAATCAAAGTATAAGCCTCTAACACCAGAAGCT
GTGATCACCAGGGAAGAGTTCGACCTGATGAAACACAGGTTCGACGAACAGGTCGAGGCGCTCAAGGCCAAGTGCGAAAAGAAAGAGTGCTCGTTTGACGATGGC
GACCTGGGAGAATCGCCATTCACCTCGGACATTTTAGAGGTTCCAATCCCTCCAAAGTTCAAGACTCCCACCATGAAGCTTTATGATCGGTCTAAGGACCCAAAA
GACTATGTGGAGGTCTTCGAGGGCCTCATGGACTTTCAAGCGGCAACAGATGCAATCAAGTGCAGCGCCTTCCAGATCGCGCTCACCGGCAGCGCGCGCTTGTGG
TACCGAAGACTGCCGGCTAGGTCGATCTCGACCTACTCTCAGCTAAGAAAAGAATTTATTAGCCAGTTCTTTTCTCGGCATTACGACAGAAAGACAGCGACTCAC
CTCGCCACCATCAGACAGAAGGAAGGTGAGACGCTGAGAGAATATGTCACAAGGTTCCAGGAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGCCAGCAAACTCTGCTAATACGACGGAACAGAGGGGTTTGAACGCTGATAACGACCCTCAGCGAGACCTTGACGCTAGAATAGTCGAGGACCACGTT
CGAGCAGGACAAGAGGGAGATCTGCCACGGAGATCTGCCCGCCATGCGAACCAGGAGTTACTCCCTGCTCACCCGAAACCTTCAAAAGCCAACCGAGGTCGAGAA
AAGAGAGCATCGCGAGAGTCGGAAGACTCTCCGTCCTACTCCCGAGAGTTCTCCAACTCTGACTTCAAGGCTCAATCAAAGTATAAGCCTCTAACACCAGAAGCT
GTGATCACCAGGGAAGAGTTCGACCTGATGAAACACAGGTTCGACGAACAGGTCGAGGCGCTCAAGGCCAAGTGCGAAAAGAAAGAGTGCTCGTTTGACGATGGC
GACCTGGGAGAATCGCCATTCACCTCGGACATTTTAGAGGTTCCAATCCCTCCAAAGTTCAAGACTCCCACCATGAAGCTTTATGATCGGTCTAAGGACCCAAAA
GACTATGTGGAGGTCTTCGAGGGCCTCATGGACTTTCAAGCGGCAACAGATGCAATCAAGTGCAGCGCCTTCCAGATCGCGCTCACCGGCAGCGCGCGCTTGTGG
TACCGAAGACTGCCGGCTAGGTCGATCTCGACCTACTCTCAGCTAAGAAAAGAATTTATTAGCCAGTTCTTTTCTCGGCATTACGACAGAAAGACAGCGACTCAC
CTCGCCACCATCAGACAGAAGGAAGGTGAGACGCTGAGAGAATATGTCACAAGGTTCCAGGAGGAGTAG
Protein sequenceShow/hide protein sequence
MVQPANSANTTEQRGLNADNDPQRDLDARIVEDHVRAGQEGDLPRRSARHANQELLPAHPKPSKANRGREKRASRESEDSPSYSREFSNSDFKAQSKYKPLTPEA
VITREEFDLMKHRFDEQVEALKAKCEKKECSFDDGDLGESPFTSDILEVPIPPKFKTPTMKLYDRSKDPKDYVEVFEGLMDFQAATDAIKCSAFQIALTGSARLW
YRRLPARSISTYSQLRKEFISQFFSRHYDRKTATHLATIRQKEGETLREYVTRFQEE