; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g07730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g07730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr3:5416246..5422963
RNA-Seq ExpressionMoc03g07730
SyntenyMoc03g07730
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595447.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.7e-3264.52Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS +V DDITF+GVLSACSYT NVK  LEIFNSME KY VEQK EHYACMVDLLGR GKLNE M+LIE MPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLL+LE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

XP_022158877.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X1 [Momordica charantia]5.9e-3567.74Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS ++ DDITFVGVLSACSYT NVK  LEIFNSMEPKYHVE+KTEHYACMVDLLGR GKLNE M LIEKMPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLLELE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

XP_022158883.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X2 [Momordica charantia]5.9e-3567.74Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS ++ DDITFVGVLSACSYT NVK  LEIFNSMEPKYHVE+KTEHYACMVDLLGR GKLNE M LIEKMPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLLELE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

XP_022924963.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Cucurbita moschata]4.7e-3264.52Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS +V DDITF+GVLSACSYT NVK  LEIFNSME KY VEQK EHYACMVDLLGR GKLNE M+LIE MPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLL+LE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

XP_022966207.1 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like [Cucurbita maxima]9.4e-3365.32Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS +V DDITF+GVLSACSYT NVK  LEIFNSME KY VEQKTEHYACMVDLLGR GKLNE M+LIE MPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLL+LE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

TrEMBL top hitse value%identityAlignment
A0A0A0L0T3 DYW_deaminase domain-containing protein4.3e-3164.75Show/hide
Query:  EALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM------------------
        EAL+VFHDMHFS I+ DD+TFVGVLSACSYT NVK  LEIFNSME KY VEQK EHYACMVDLLGR GKLNE M+LIEKMPM                  
Subjt:  EALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM------------------

Query:  ---------KKLLELESKNAGP
                 KKLL LE KNAGP
Subjt:  ---------KKLLELESKNAGP

A0A6J1DX33 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X12.9e-3567.74Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS ++ DDITFVGVLSACSYT NVK  LEIFNSMEPKYHVE+KTEHYACMVDLLGR GKLNE M LIEKMPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLLELE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

A0A6J1DXB5 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like isoform X22.9e-3567.74Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS ++ DDITFVGVLSACSYT NVK  LEIFNSMEPKYHVE+KTEHYACMVDLLGR GKLNE M LIEKMPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLLELE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

A0A6J1EAQ8 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like2.3e-3264.52Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS +V DDITF+GVLSACSYT NVK  LEIFNSME KY VEQK EHYACMVDLLGR GKLNE M+LIE MPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLL+LE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

A0A6J1HMD2 pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like4.6e-3365.32Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------
        EEALQVFHDMHFS +V DDITF+GVLSACSYT NVK  LEIFNSME KY VEQKTEHYACMVDLLGR GKLNE M+LIE MPM                 
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPM-----------------

Query:  ----------KKLLELESKNAGPH
                  KKLL+LE KNAGP+
Subjt:  ----------KKLLELESKNAGPH

SwissProt top hitse value%identityAlignment
Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial3.2e-1537.09Show/hide
Query:  EEALQVFHDMHFS-SIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKG
        EEAL+VF +M  S S   +++TFV  LSACSY   V+  L+I+ SME  + V+  T HYACMVD+LGR G+ NE M +I+ M ++    +     G  + 
Subjt:  EEALQVFHDMHFS-SIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKG

Query:  KEKLEVS--TKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR
          +L+V+    +  IE+ P        L+ +  +QG    V  ++KL K R
Subjt:  KEKLEVS--TKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR

Q9FMA1 Pentatricopeptide repeat-containing protein At5g563101.6e-1445.78Show/hide
Query:  EALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMK
        EAL +F+ M  + +  +D+TF+ +LSACS+   V +   +FNSM  KY +    EHY CM+DLLGR GKL E   +I+ MP K
Subjt:  EALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMK

Q9FXB9 Pentatricopeptide repeat-containing protein At1g56690, mitochondrial4.9e-1640.35Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKGK
        EEAL++FH+M  S  + + +T + +L+ACSY   ++  LEIF SME K+ V    EHY+C VD+LGR G++++ M LIE M +K    +     G  K  
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKGK

Query:  EKL---EVSTKEVF
         +L   EV+ K++F
Subjt:  EKL---EVSTKEVF

Q9LND4 Pentatricopeptide repeat-containing protein At1g06140, mitochondrial3.7e-1648.84Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKL
        EEAL  FH M   ++V + +TFV +LSACS++ NVK   + F SM   Y V  + EHYACMVDLLGR G++ E  + I+ MP+K +
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKL

Q9SS83 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial2.0e-1435.95Show/hide
Query:  FREEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGP--
        + E+AL++F  M  S I+ D+ITF+GVL+ACS+   V    +IF  M  +Y +E + +H ACMVDLLGR G L E  + IE   +K    L S   G   
Subjt:  FREEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGP--

Query:  -HKGKEKLEVSTKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR
         H    + E+S  E  IE+ P        L+ +  +QG   K + ++K+ + R
Subjt:  -HKGKEKLEVSTKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR

Arabidopsis top hitse value%identityAlignment
AT1G06140.1 Pentatricopeptide repeat (PPR) superfamily protein2.6e-1748.84Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKL
        EEAL  FH M   ++V + +TFV +LSACS++ NVK   + F SM   Y V  + EHYACMVDLLGR G++ E  + I+ MP+K +
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKL

AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein2.2e-1637.09Show/hide
Query:  EEALQVFHDMHFS-SIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKG
        EEAL+VF +M  S S   +++TFV  LSACSY   V+  L+I+ SME  + V+  T HYACMVD+LGR G+ NE M +I+ M ++    +     G  + 
Subjt:  EEALQVFHDMHFS-SIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKG

Query:  KEKLEVS--TKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR
          +L+V+    +  IE+ P        L+ +  +QG    V  ++KL K R
Subjt:  KEKLEVS--TKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR

AT1G56690.1 Pentatricopeptide repeat (PPR) superfamily protein3.5e-1740.35Show/hide
Query:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKGK
        EEAL++FH+M  S  + + +T + +L+ACSY   ++  LEIF SME K+ V    EHY+C VD+LGR G++++ M LIE M +K    +     G  K  
Subjt:  EEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKGK

Query:  EKL---EVSTKEVF
         +L   EV+ K++F
Subjt:  EKL---EVSTKEVF

AT3G09040.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-1535.95Show/hide
Query:  FREEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGP--
        + E+AL++F  M  S I+ D+ITF+GVL+ACS+   V    +IF  M  +Y +E + +H ACMVDLLGR G L E  + IE   +K    L S   G   
Subjt:  FREEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGP--

Query:  -HKGKEKLEVSTKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR
         H    + E+S  E  IE+ P        L+ +  +QG   K + ++K+ + R
Subjt:  -HKGKEKLEVSTKEVFIEVSPNP------LTQLEVNQGLLRKVDLVKKLKKAR

AT5G56310.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-1545.78Show/hide
Query:  EALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMK
        EAL +F+ M  + +  +D+TF+ +LSACS+   V +   +FNSM  KY +    EHY CM+DLLGR GKL E   +I+ MP K
Subjt:  EALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKYHVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGTGAATGCTGGAAAATTTGTGGACGGGATTTTGATGGATTATATGAGTTTGGAGATGGACGACGAGACCTTGCTAAGAACCTTGACAACGGTGAAGGTT
TGCAATCAAGGATGTTGTTATGTGGAACTCTATTATCACATGATATGCCCAACATGGTTTAGGGAGGAAGCATTACAAGTTTTCCATGATATGCATTTTTCAAGT
ATCGTGTCTGATGATATCACATTTGTTGGAGTTCTTTCAGCATGTAGTTACACTAGGAATGTGAAAATGGACCTAGAAATTTTCAATTCCATGGAACCAAAGTAT
CATGTGGAACAAAAAACAGAACACTATGCATGCATGGTTGATTTGCTTGGTCGAGTTGGTAAGCTAAATGAGGAAATGAATTTAATTGAAAAAATGCCAATGAAA
AAACTTCTTGAGCTTGAGTCTAAGAATGCAGGGCCTCATAAAGGCAAGGAGAAGCTAGAGGTTTCTACTAAGGAGGTTTTTATTGAGGTGAGCCCAAATCCGCTG
ACCCAGTTAGAGGTCAATCAGGGGCTACTACGTAAGGTTGATTTAGTGAAAAAACTGAAGAAAGCAAGAAAGACCGATGACCAAGAAAAGGAGAATGCATCGTTG
GATGTAGAAACTCATGATAATATTGGAGAATACATCGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGTGAATGCTGGAAAATTTGTGGACGGGATTTTGATGGATTATATGAGTTTGGAGATGGACGACGAGACCTTGCTAAGAACCTTGACAACGGTGAAGGTT
TGCAATCAAGGATGTTGTTATGTGGAACTCTATTATCACATGATATGCCCAACATGGTTTAGGGAGGAAGCATTACAAGTTTTCCATGATATGCATTTTTCAAGT
ATCGTGTCTGATGATATCACATTTGTTGGAGTTCTTTCAGCATGTAGTTACACTAGGAATGTGAAAATGGACCTAGAAATTTTCAATTCCATGGAACCAAAGTAT
CATGTGGAACAAAAAACAGAACACTATGCATGCATGGTTGATTTGCTTGGTCGAGTTGGTAAGCTAAATGAGGAAATGAATTTAATTGAAAAAATGCCAATGAAA
AAACTTCTTGAGCTTGAGTCTAAGAATGCAGGGCCTCATAAAGGCAAGGAGAAGCTAGAGGTTTCTACTAAGGAGGTTTTTATTGAGGTGAGCCCAAATCCGCTG
ACCCAGTTAGAGGTCAATCAGGGGCTACTACGTAAGGTTGATTTAGTGAAAAAACTGAAGAAAGCAAGAAAGACCGATGACCAAGAAAAGGAGAATGCATCGTTG
GATGTAGAAACTCATGATAATATTGGAGAATACATCGAATAA
Protein sequenceShow/hide protein sequence
MPVNAGKFVDGILMDYMSLEMDDETLLRTLTTVKVCNQGCCYVELYYHMICPTWFREEALQVFHDMHFSSIVSDDITFVGVLSACSYTRNVKMDLEIFNSMEPKY
HVEQKTEHYACMVDLLGRVGKLNEEMNLIEKMPMKKLLELESKNAGPHKGKEKLEVSTKEVFIEVSPNPLTQLEVNQGLLRKVDLVKKLKKARKTDDQEKENASL
DVETHDNIGEYIE