; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g07830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g07830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionReverse transcriptase
Genome locationchr3:5499287..5502047
RNA-Seq ExpressionMoc03g07830
SyntenyMoc03g07830
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR021109 - Aspartic peptidase domain superfamily
IPR036397 - Ribonuclease H superfamily
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036830.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-22347.17Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQ AF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GSIR+ +++ LQ D AAQ ++ LA  GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAE TAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]1.5e-22347.07Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQ AF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ LA  GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAE TAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

TYK01597.1 reverse transcriptase [Cucumis melo var. makuwa]6.7e-22447.17Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQAAF+ LK+AM+EGP+LGIADVT+PFEVE DASN+ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPI YESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G  NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ L   GKTRQFWVE DL  TKGNRLYVPR+G+LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAEMTAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFN MLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

TYK07954.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-22347.17Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQAAF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ LA  GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAE TAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

TYK08407.1 reverse transcriptase [Cucumis melo var. makuwa]5.4e-22648.81Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  G THNF+TE +A+RLNLRW+KD G+MKAVNSAALPI+G+ KR +++LG WSG VDFV+V++DDFDVVLGMEFLLEH+VI MPLAKCLV+TGS P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQ  ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------NQ--------------------------------------------------------------------------
                                NQ                                                                          
Subjt:  ------------------------NQ--------------------------------------------------------------------------

Query:  -------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDGHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLG
                WNW PECQ AF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG
Subjt:  -------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDGHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLG

Query:  AKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEHAALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANE
        + FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EHAA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ LA  
Subjt:  AKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEHAALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANE

Query:  GKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKDKM------------------
        GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+WPN+RDDVMQYTKTCLIC++DK+                  
Subjt:  GKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKDKM------------------

Query:  ----------------------------------------CSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDG
                                                CSAE TAQLFFK+VVKLWGVP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDG
Subjt:  ----------------------------------------CSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDG

Query:  QTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLPHVVDHPYVGKSPQAYNFTKE
        QTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLPH+VDHP+ GK+PQA NFTKE
Subjt:  QTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLPHVVDHPYVGKSPQAYNFTKE

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase5.5e-22447.17Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQ AF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GSIR+ +++ LQ D AAQ ++ LA  GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAE TAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

A0A5D3BQE4 Reverse transcriptase3.2e-22447.17Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQAAF+ LK+AM+EGP+LGIADVT+PFEVE DASN+ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPI YESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G  NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ L   GKTRQFWVE DL  TKGNRLYVPR+G+LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAEMTAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFN MLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

A0A5D3C4R1 Reverse transcriptase7.2e-22447.07Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQ AF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ LA  GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAE TAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

A0A5D3C8W7 Reverse transcriptase2.6e-22648.81Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  G THNF+TE +A+RLNLRW+KD G+MKAVNSAALPI+G+ KR +++LG WSG VDFV+V++DDFDVVLGMEFLLEH+VI MPLAKCLV+TGS P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQ  ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------NQ--------------------------------------------------------------------------
                                NQ                                                                          
Subjt:  ------------------------NQ--------------------------------------------------------------------------

Query:  -------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDGHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLG
                WNW PECQ AF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG
Subjt:  -------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDGHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLG

Query:  AKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEHAALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANE
        + FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EHAA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ LA  
Subjt:  AKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEHAALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANE

Query:  GKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKDKM------------------
        GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+WPN+RDDVMQYTKTCLIC++DK+                  
Subjt:  GKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKDKM------------------

Query:  ----------------------------------------CSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDG
                                                CSAE TAQLFFK+VVKLWGVP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDG
Subjt:  ----------------------------------------CSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDG

Query:  QTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLPHVVDHPYVGKSPQAYNFTKE
        QTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLPH+VDHP+ GK+PQA NFTKE
Subjt:  QTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLPHVVDHPYVGKSPQAYNFTKE

A0A5D3C9P8 Reverse transcriptase5.5e-22447.17Show/hide
Query:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV
        MV  GATHNF+TE EA+RLNLRW+KD G+MKAVNSAALPI+G+ KR  ++LG WSG VDFV+V+MDDFDVVLGMEFLLEH+VIPMPLAKCLV+TG  P+V
Subjt:  MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTV

Query:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------
        VQT ++QP G+KMISA+QLKKGL+RDEPTFMAIP+    NS E VPKEI RVL  Y D                                          
Subjt:  VQTSIKQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVD------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------------NQ---------------------------------
                                                                         NQ                                 
Subjt:  -----------------------------------------------------------------NQ---------------------------------

Query:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD
                                                         WNW PECQAAF+ LK+A++EGP+LGIADVT+PFEVE DAS++ LGGVLLQ+
Subjt:  ------------------------------------------------KWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQD

Query:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH
        GHPIAYESRK N AERRY   EKEML VVHCLRAWRQYLLG+ FVV TDNS+ CHFF QPKL+SKQA+WQE+LAEFDF+FEHK G +NQ ADALSRK EH
Subjt:  GHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEH

Query:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY
        AA+C+LAHL+ S++ GS+R+ +++ LQ D AAQ ++ LA  GKTRQFWVE DL  TKGNRLYVPR+G LRK LL ECHDT+WAGH GWQRTYALLKKGY+
Subjt:  AALCMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYY

Query:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG
        WPN+RDDVMQYTKTCLIC++DK+                                                          CSAE TAQLFFK+VVKLWG
Subjt:  WPNLRDDVMQYTKTCLICEKDKM----------------------------------------------------------CSAEMTAQLFFKNVVKLWG

Query:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP
        VP SIVSDRD RF G+FW ELF  LG++LNISSSYHPQTDGQTERFNSMLEEYLRHF++ARQKNW+Q+LDVAQFCFN Q S++T R+PFEIV GRQPVLP
Subjt:  VPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVLP

Query:  HVVDHPYVGKSPQAYNFTKE
        H+VDHP+ GK+PQA NFTKE
Subjt:  HVVDHPYVGKSPQAYNFTKE

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein2.4e-4323.9Show/hide
Query:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR
        N+   + +W WTP    A E++K+ ++  PVL   D ++   +E DAS+  +G VL Q       +P+ Y S K + A+  Y+  +KEML ++  L+ WR
Subjt:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR

Query:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI
         YL      F + TD+ + +    N+ +  +K+ A+WQ +L +F+F+  ++PG AN +ADALSR           SE  ++  +  +    +T   +  +
Subjt:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI

Query:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-
             ND     ++   ++       +++ L     +++ +P    L + ++ + H+     H G +    ++ + + W  +R  + +Y + C  C+ + 
Subjt:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-

Query:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF
                                                                 K  +AE TA++F + V+  +G P+ I++D D  FT   W +  
Subjt:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF

Query:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL
              +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q  +N    + T+ TPFEIV    P L
Subjt:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL

P0CT35 Transposon Tf2-2 polyprotein2.4e-4323.9Show/hide
Query:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR
        N+   + +W WTP    A E++K+ ++  PVL   D ++   +E DAS+  +G VL Q       +P+ Y S K + A+  Y+  +KEML ++  L+ WR
Subjt:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR

Query:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI
         YL      F + TD+ + +    N+ +  +K+ A+WQ +L +F+F+  ++PG AN +ADALSR           SE  ++  +  +    +T   +  +
Subjt:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI

Query:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-
             ND     ++   ++       +++ L     +++ +P    L + ++ + H+     H G +    ++ + + W  +R  + +Y + C  C+ + 
Subjt:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-

Query:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF
                                                                 K  +AE TA++F + V+  +G P+ I++D D  FT   W +  
Subjt:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF

Query:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL
              +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q  +N    + T+ TPFEIV    P L
Subjt:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL

P0CT36 Transposon Tf2-3 polyprotein2.4e-4323.9Show/hide
Query:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR
        N+   + +W WTP    A E++K+ ++  PVL   D ++   +E DAS+  +G VL Q       +P+ Y S K + A+  Y+  +KEML ++  L+ WR
Subjt:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR

Query:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI
         YL      F + TD+ + +    N+ +  +K+ A+WQ +L +F+F+  ++PG AN +ADALSR           SE  ++  +  +    +T   +  +
Subjt:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI

Query:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-
             ND     ++   ++       +++ L     +++ +P    L + ++ + H+     H G +    ++ + + W  +R  + +Y + C  C+ + 
Subjt:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-

Query:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF
                                                                 K  +AE TA++F + V+  +G P+ I++D D  FT   W +  
Subjt:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF

Query:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL
              +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q  +N    + T+ TPFEIV    P L
Subjt:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL

P0CT41 Transposon Tf2-12 polyprotein2.4e-4323.9Show/hide
Query:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR
        N+   + +W WTP    A E++K+ ++  PVL   D ++   +E DAS+  +G VL Q       +P+ Y S K + A+  Y+  +KEML ++  L+ WR
Subjt:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR

Query:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI
         YL      F + TD+ + +    N+ +  +K+ A+WQ +L +F+F+  ++PG AN +ADALSR           SE  ++  +  +    +T   +  +
Subjt:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI

Query:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-
             ND     ++   ++       +++ L     +++ +P    L + ++ + H+     H G +    ++ + + W  +R  + +Y + C  C+ + 
Subjt:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-

Query:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF
                                                                 K  +AE TA++F + V+  +G P+ I++D D  FT   W +  
Subjt:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF

Query:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL
              +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q  +N    + T+ TPFEIV    P L
Subjt:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL

Q9UR07 Transposon Tf2-11 polyprotein2.4e-4323.9Show/hide
Query:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR
        N+   + +W WTP    A E++K+ ++  PVL   D ++   +E DAS+  +G VL Q       +P+ Y S K + A+  Y+  +KEML ++  L+ WR
Subjt:  NVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLLQDG-----HPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWR

Query:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI
         YL      F + TD+ + +    N+ +  +K+ A+WQ +L +F+F+  ++PG AN +ADALSR           SE  ++  +  +    +T   +  +
Subjt:  QYLLGA--KFVVYTDNSS-VCHFFNQPKLSSKQ-AKWQEYLAEFDFQFEHKPGRANQVADALSR----------KSEHAALCMLAHLKASKLTGSIREAI

Query:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-
             ND     ++   ++       +++ L     +++ +P    L + ++ + H+     H G +    ++ + + W  +R  + +Y + C  C+ + 
Subjt:  KKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDVMQYTKTCLICEKD-

Query:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF
                                                                 K  +AE TA++F + V+  +G P+ I++D D  FT   W +  
Subjt:  ---------------------------------------------------------KMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELF

Query:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL
              +  S  Y PQTDGQTER N  +E+ LR         W+  + + Q  +N    + T+ TPFEIV    P L
Subjt:  RLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDVAQFCFNCQKSTTTRRTPFEIVCGRQPVL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATATTATGGTGCCACCCACAATTTCATGACAGAAACCGAAGCACGTCGGCTGAACTTGCGATGGGATAAAGACCCAGGAAAGATGAAAGCGGTCAACTCG
GCCGCCCTCCCCATCATGGGAGTTGCCAAGAGAGTCTCAGTGAAGCTAGGGACATGGAGTGGACAGGTCGACTTCGTGATAGTGCGGATGGACGACTTCGACGTA
GTATTGGGGATGGAATTTCTGCTGGAACACAAAGTCATCCCCATGCCCCTCGCTAAGTGCCTGGTTGTAACGGGTTCCGATCCCACAGTTGTTCAGACAAGCATC
AAACAACCAAGCGGAGTGAAGATGATATCAGCACTCCAACTAAAGAAAGGTCTCGCTCGCGACGAGCCAACATTCATGGCCATCCCTGTTGTGGAAGGCGGAAAT
TCTGAAGAGCTAGTTCCCAAAGAAATCCAGAGAGTCTTGAATGTGTATGTCGATAACCAGAAGTGGAACTGGACCCCAGAATGTCAAGCCGCGTTTGAGAGTTTG
AAAAAGGCGATGATAGAGGGGCCGGTGTTGGGAATTGCAGACGTCACACGACCATTCGAAGTCGAGATTGATGCATCAAACTTCGTCCTGGGAGGAGTGCTTCTC
CAAGACGGTCACCCCATTGCATACGAGAGTCGAAAGTTTAATGATGCTGAAAGGAGGTATGCCGCCTTCGAGAAAGAGATGTTAGTAGTAGTCCACTGTTTGAGG
GCCTGGAGGCAATATCTCCTAGGGGCCAAGTTCGTTGTCTATACTGACAACAGCTCAGTCTGTCACTTCTTCAACCAACCGAAGTTGTCGTCTAAGCAAGCCAAG
TGGCAAGAGTACCTTGCTGAGTTTGATTTTCAGTTCGAACATAAGCCGGGTCGAGCAAATCAGGTAGCAGATGCCCTTAGCAGAAAGAGCGAACATGCAGCCCTG
TGCATGTTAGCTCACCTAAAAGCGAGCAAGCTAACTGGATCCATTCGTGAAGCCATAAAAAAGAACTTACAGAACGACCCAGCTGCCCAAGCGATAATTCAGTTG
GCCAACGAAGGGAAGACTAGACAGTTTTGGGTGGAGAATGACCTCTTCTTCACCAAAGGTAATCGTTTGTATGTTCCCCGTTCTGGGAACCTGAGGAAGCTCCTA
CTTGGAGAATGTCATGACACGATGTGGGCAGGCCACGCTGGATGGCAGAGAACTTACGCCCTGCTAAAAAAAGGCTACTACTGGCCGAATTTGAGAGACGACGTG
ATGCAATATACAAAAACGTGTCTCATCTGCGAAAAGGACAAGATGTGCTCGGCCGAAATGACTGCACAGTTATTTTTCAAGAATGTTGTAAAACTATGGGGTGTC
CCTGAGAGCATCGTGAGCGACAGAGACGAACGCTTCACAGGGACATTCTGGATAGAACTTTTCCGCCTATTGGGATCCAATCTGAACATCTCTTCGAGTTATCAC
CCACAGACAGACGGACAGACGGAACGCTTCAACAGCATGCTAGAAGAGTACCTCCGGCACTTTATTGATGCTCGGCAAAAGAACTGGATCCAGATGCTCGATGTA
GCTCAATTCTGTTTCAATTGCCAAAAGAGCACCACCACGAGAAGAACCCCTTTCGAAATAGTGTGCGGGCGACAACCTGTGTTACCTCATGTTGTCGACCATCCT
TATGTGGGCAAGAGCCCTCAAGCCTACAATTTCACTAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATATTATGGTGCCACCCACAATTTCATGACAGAAACCGAAGCACGTCGGCTGAACTTGCGATGGGATAAAGACCCAGGAAAGATGAAAGCGGTCAACTCG
GCCGCCCTCCCCATCATGGGAGTTGCCAAGAGAGTCTCAGTGAAGCTAGGGACATGGAGTGGACAGGTCGACTTCGTGATAGTGCGGATGGACGACTTCGACGTA
GTATTGGGGATGGAATTTCTGCTGGAACACAAAGTCATCCCCATGCCCCTCGCTAAGTGCCTGGTTGTAACGGGTTCCGATCCCACAGTTGTTCAGACAAGCATC
AAACAACCAAGCGGAGTGAAGATGATATCAGCACTCCAACTAAAGAAAGGTCTCGCTCGCGACGAGCCAACATTCATGGCCATCCCTGTTGTGGAAGGCGGAAAT
TCTGAAGAGCTAGTTCCCAAAGAAATCCAGAGAGTCTTGAATGTGTATGTCGATAACCAGAAGTGGAACTGGACCCCAGAATGTCAAGCCGCGTTTGAGAGTTTG
AAAAAGGCGATGATAGAGGGGCCGGTGTTGGGAATTGCAGACGTCACACGACCATTCGAAGTCGAGATTGATGCATCAAACTTCGTCCTGGGAGGAGTGCTTCTC
CAAGACGGTCACCCCATTGCATACGAGAGTCGAAAGTTTAATGATGCTGAAAGGAGGTATGCCGCCTTCGAGAAAGAGATGTTAGTAGTAGTCCACTGTTTGAGG
GCCTGGAGGCAATATCTCCTAGGGGCCAAGTTCGTTGTCTATACTGACAACAGCTCAGTCTGTCACTTCTTCAACCAACCGAAGTTGTCGTCTAAGCAAGCCAAG
TGGCAAGAGTACCTTGCTGAGTTTGATTTTCAGTTCGAACATAAGCCGGGTCGAGCAAATCAGGTAGCAGATGCCCTTAGCAGAAAGAGCGAACATGCAGCCCTG
TGCATGTTAGCTCACCTAAAAGCGAGCAAGCTAACTGGATCCATTCGTGAAGCCATAAAAAAGAACTTACAGAACGACCCAGCTGCCCAAGCGATAATTCAGTTG
GCCAACGAAGGGAAGACTAGACAGTTTTGGGTGGAGAATGACCTCTTCTTCACCAAAGGTAATCGTTTGTATGTTCCCCGTTCTGGGAACCTGAGGAAGCTCCTA
CTTGGAGAATGTCATGACACGATGTGGGCAGGCCACGCTGGATGGCAGAGAACTTACGCCCTGCTAAAAAAAGGCTACTACTGGCCGAATTTGAGAGACGACGTG
ATGCAATATACAAAAACGTGTCTCATCTGCGAAAAGGACAAGATGTGCTCGGCCGAAATGACTGCACAGTTATTTTTCAAGAATGTTGTAAAACTATGGGGTGTC
CCTGAGAGCATCGTGAGCGACAGAGACGAACGCTTCACAGGGACATTCTGGATAGAACTTTTCCGCCTATTGGGATCCAATCTGAACATCTCTTCGAGTTATCAC
CCACAGACAGACGGACAGACGGAACGCTTCAACAGCATGCTAGAAGAGTACCTCCGGCACTTTATTGATGCTCGGCAAAAGAACTGGATCCAGATGCTCGATGTA
GCTCAATTCTGTTTCAATTGCCAAAAGAGCACCACCACGAGAAGAACCCCTTTCGAAATAGTGTGCGGGCGACAACCTGTGTTACCTCATGTTGTCGACCATCCT
TATGTGGGCAAGAGCCCTCAAGCCTACAATTTCACTAAGGAATGA
Protein sequenceShow/hide protein sequence
MVYYGATHNFMTETEARRLNLRWDKDPGKMKAVNSAALPIMGVAKRVSVKLGTWSGQVDFVIVRMDDFDVVLGMEFLLEHKVIPMPLAKCLVVTGSDPTVVQTSI
KQPSGVKMISALQLKKGLARDEPTFMAIPVVEGGNSEELVPKEIQRVLNVYVDNQKWNWTPECQAAFESLKKAMIEGPVLGIADVTRPFEVEIDASNFVLGGVLL
QDGHPIAYESRKFNDAERRYAAFEKEMLVVVHCLRAWRQYLLGAKFVVYTDNSSVCHFFNQPKLSSKQAKWQEYLAEFDFQFEHKPGRANQVADALSRKSEHAAL
CMLAHLKASKLTGSIREAIKKNLQNDPAAQAIIQLANEGKTRQFWVENDLFFTKGNRLYVPRSGNLRKLLLGECHDTMWAGHAGWQRTYALLKKGYYWPNLRDDV
MQYTKTCLICEKDKMCSAEMTAQLFFKNVVKLWGVPESIVSDRDERFTGTFWIELFRLLGSNLNISSSYHPQTDGQTERFNSMLEEYLRHFIDARQKNWIQMLDV
AQFCFNCQKSTTTRRTPFEIVCGRQPVLPHVVDHPYVGKSPQAYNFTKE