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Moc03g13980 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g13980
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationchr3:9391608..9400587
RNA-Seq ExpressionMoc03g13980
SyntenyMoc03g13980
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]6.7e-3590Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQV
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGG+  V
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQV

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]1.8e-1152.75Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+   V  G   G D  R
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.8e-1152.75Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+   V  G   G D  R
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR

XP_023541047.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111801285 [Cucurbita pepo subsp. pepo]1.3e-0950.55Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R P P P      + YEGD  DH ED+   V  G   G D  R
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]3.4e-1050.55Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR
        M N  D  +I+DAR REA + T++R+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+   V  G   G D  R
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVR

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein1.2e-0845.68Show/hide
Query:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPR
        E    + + REA +G + RMI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  PR
Subjt:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPR

A0A5A7TYI0 Uncharacterized protein1.0e-0451.72Show/hide
Query:  MEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPR
        MEALT+R+ RLE +N+A+ER+PPP  P +    + ++YEGDG D  +DDQ T+L  PR
Subjt:  MEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPR

A0A5D3CHG3 Retrotrans_gag domain-containing protein2.7e-0550Show/hide
Query:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPR
        MI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  PR
Subjt:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAGPR

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241153.2e-3590Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQV
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGG+  V
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQV

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699482.3e-0947.52Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDD-QATVLAGPRGGEDQVRGDGAVETR
        M N  +  +I+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+ Q   L   R    +   D  VE +
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDD-QATVLAGPRGGEDQVRGDGAVETR

Query:  E
        E
Subjt:  E

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAACAGCTTAGTTCCTTGGCGTTCGGTGATTACCCACTTCCGTTCGAGGCCCGATTCACGTTATCCATACCTTTTCGAGCAAGATTTAGGTGTGGGATTG
ATGCAAGAACTTTATGATTACTGGGATATGATAATTGTTGAATTAGGAGACAGTGATAGGACGGACTGGTTGCTTTGTTGTTGTGAGTTGTCTGAAGTAGTAGAC
AGGACTAATGATTTCGTTACTGGGAGAACTTATGCGAATGGAGACATACATAGACTTGGTGGCAAATGGCTGGGGCTGGTACGTCACTACTGGGTGTTGAGGCTC
CGAGTGCAAAAGGTAATCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGG
TTCTTAGATCCAACTCTCAAGGGTTTCTTAACATTTTGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACT
GTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCCACCACCTCCACCACCACGT
GTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCATTGGGAGGACGATCAGGCTACAGTTTTAGCGGGTCCAAGAGGGGGTGAAGATCAGGTTCGTGGT
GATGGTGCGGTGGAGACTCGAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAACAGCTTAGTTCCTTGGCGTTCGGTGATTACCCACTTCCGTTCGAGGCCCGATTCACGTTATCCATACCTTTTCGAGCAAGATTTAGGTGTGGGATTG
ATGCAAGAACTTTATGATTACTGGGATATGATAATTGTTGAATTAGGAGACAGTGATAGGACGGACTGGTTGCTTTGTTGTTGTGAGTTGTCTGAAGTAGTAGAC
AGGACTAATGATTTCGTTACTGGGAGAACTTATGCGAATGGAGACATACATAGACTTGGTGGCAAATGGCTGGGGCTGGTACGTCACTACTGGGTGTTGAGGCTC
CGAGTGCAAAAGGTAATCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGG
TTCTTAGATCCAACTCTCAAGGGTTTCTTAACATTTTGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACT
GTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCCACCACCTCCACCACCACGT
GTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCATTGGGAGGACGATCAGGCTACAGTTTTAGCGGGTCCAAGAGGGGGTGAAGATCAGGTTCGTGGT
GATGGTGCGGTGGAGACTCGAGAAGAATGA
Protein sequenceShow/hide protein sequence
MQNSLVPWRSVITHFRSRPDSRYPYLFEQDLGVGLMQELYDYWDMIIVELGDSDRTDWLLCCCELSEVVDRTNDFVTGRTYANGDIHRLGGKWLGLVRHYWVLRL
RVQKVIRSKTFPWVDSILVFGVFGIEFYGSCSLARFLDPTLKGFLTFCMANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPR
VMDEDEYEGDGSDHWEDDQATVLAGPRGGEDQVRGDGAVETREE