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Moc03g14120 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14120
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationchr3:9502649..9520360
RNA-Seq ExpressionMoc03g14120
SyntenyMoc03g14120
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]7.6e-1441.98Show/hide
Query:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRG
        E    + + REA +G + RMI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  P    R VG G+ R RGRGR 
Subjt:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRG

Query:  YHNFQRAPRANAQATLLIRGRIVFKNEEMIR
        Y N QR  +  A         I FK  +  R
Subjt:  YHNFQRAPRANAQATLLIRGRIVFKNEEMIR

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]6.0e-5193.1Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGGD HVG GLDRGRGR
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQRAPRANAQ
        GRGYHNFQRAPRANAQ
Subjt:  GRGYHNFQRAPRANAQ

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]4.5e-1451.38Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR
        GR YHN Q+
Subjt:  GRGYHNFQR

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]4.5e-1451.38Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR
        GR YHN Q+
Subjt:  GRGYHNFQR

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]8.4e-1349.54Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR
        M N  D  +I+DAR REA + T++R+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR
        GR YHN Q+
Subjt:  GRGYHNFQR

TrEMBL top hitse value%identityAlignment
A0A5A7TK52 Retrotrans_gag domain-containing protein3.7e-1441.98Show/hide
Query:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRG
        E    + + REA +G + RMI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  P    R VG G+ R RGRGR 
Subjt:  EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRG

Query:  YHNFQRAPRANAQATLLIRGRIVFKNEEMIR
        Y N QR  +  A         I FK  +  R
Subjt:  YHNFQRAPRANAQATLLIRGRIVFKNEEMIR

A0A5A7TYI0 Uncharacterized protein6.1e-0949.4Show/hide
Query:  MEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQR
        MEALT+R+ RLE +N+A+ER+PPP  P +    + ++YEGDG D  +DDQ T+L  P    R VG G+ R RG G+ Y N QR
Subjt:  MEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQR

A0A5D3CHG3 Retrotrans_gag domain-containing protein5.0e-1143.75Show/hide
Query:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQATLLIR
        MI +MEALT+R+ R E +N+A+ER+PPP  P ++   ++++ EGDGSD  +DDQ T+L  P    R VG G+ R RGRGR Y N QR  +  A       
Subjt:  MIRSMEALTERIGRLETQNQAQERVPPPPPPRVM---DEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQATLLIR

Query:  GRIVFKNEEMIR
          I FK  +  R
Subjt:  GRIVFKNEEMIR

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241152.9e-5193.1Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR
        MANLG EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGGD HVG GLDRGRGR
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQRAPRANAQ
        GRGYHNFQRAPRANAQ
Subjt:  GRGYHNFQRAPRANAQ

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699483.6e-0954.67Show/hide
Query:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDD
        M N  +  +I+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+
Subjt:  MANLGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAGGAGCTGCCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACTTCAACAAGCTTTGCTACTTCATGTCCAAGCGTTCTTGAAC
TCGACAAGAGAAATAAAGGAAGATGTGCAAGAAGTAGTCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTAT
GGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCTGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGT
AGCATGGAGGCATTGACAGAACGGATAGGAAGCTCATGTGATATGAACCAAGGAGCTACCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAA
CTTCAACAAGCATTGCTACTTCGTGTCCAAGCGTTCTTGAACTCGACAAGAGAAATAAAGGAAGATGTGCAAGAAGTAATCCGTTCTAAAACTTTTCCTTGGGTT
GATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGG
AGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGA
GTTCCACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCATTGGGAGGACGATCAAGCTACAGTTTTAGCGGCTCCAAGA
GGGGGTGATAGGCACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAATTTCCAAAGAGCCCCACGAGCGAATGCTCAAGCTACCCTC
TTGATTAGAGGACGAATCGTTTTCAAGAATGAGGAGATGATACGATCATATTTGGCACGAAGTCCTTGGAACCTAATCACGCCAAGTGGAGAACCCAACCGCATG
CTTAAGGCCAACATCAATGTGCTAACCTTGTATGGAAACAGCCCACGCGCACGTGACAACGTCCTCCGTACAGTCACTTACGCTTCAATGCGCGCATCCGTGCCC
ATGTACGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAACCAAGGAGCTGCCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAACTTCAACAAGCTTTGCTACTTCATGTCCAAGCGTTCTTGAAC
TCGACAAGAGAAATAAAGGAAGATGTGCAAGAAGTAGTCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTAT
GGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCTGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGT
AGCATGGAGGCATTGACAGAACGGATAGGAAGCTCATGTGATATGAACCAAGGAGCTACCGTTGTTATGCCTCATGGACCGATTACAAGATCGAGAGCTAGGAAA
CTTCAACAAGCATTGCTACTTCGTGTCCAAGCGTTCTTGAACTCGACAAGAGAAATAAAGGAAGATGTGCAAGAAGTAATCCGTTCTAAAACTTTTCCTTGGGTT
GATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATGGCTAATCTTGGAGATGAAGGCAATATTTCTGATGCCCGG
AGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGGATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGA
GTTCCACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCATTGGGAGGACGATCAAGCTACAGTTTTAGCGGCTCCAAGA
GGGGGTGATAGGCACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAATTTCCAAAGAGCCCCACGAGCGAATGCTCAAGCTACCCTC
TTGATTAGAGGACGAATCGTTTTCAAGAATGAGGAGATGATACGATCATATTTGGCACGAAGTCCTTGGAACCTAATCACGCCAAGTGGAGAACCCAACCGCATG
CTTAAGGCCAACATCAATGTGCTAACCTTGTATGGAAACAGCCCACGCGCACGTGACAACGTCCTCCGTACAGTCACTTACGCTTCAATGCGCGCATCCGTGCCC
ATGTACGCATAG
Protein sequenceShow/hide protein sequence
MNQGAAVVMPHGPITRSRARKLQQALLLHVQAFLNSTREIKEDVQEVVRSKTFPWVDSILVFGVFGIEFYGSCSLASMANLGDEGNISDAWRREALEGTVERMIR
SMEALTERIGSSCDMNQGATVVMPHGPITRSRARKLQQALLLRVQAFLNSTREIKEDVQEVIRSKTFPWVDSILVFGVFGIEFYGSCSLASMANLGDEGNISDAR
RREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAAPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQATL
LIRGRIVFKNEEMIRSYLARSPWNLITPSGEPNRMLKANINVLTLYGNSPRARDNVLRTVTYASMRASVPMYA