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Moc03g14320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:9639722..9641727
RNA-Seq ExpressionMoc03g14320
SyntenyMoc03g14320
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150385.1 uncharacterized protein LOC111018561 [Momordica charantia]6.6e-1767.44Show/hide
Query:  APSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE
        A S    +R  +  D G     RD D R  + D+KK+ASREP+DSPSYSREFSNS+LKAQSKYKPL PEAVITREEFDLMKHRFDE
Subjt:  APSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]7.9e-4786.84Show/hide
Query:  MEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVI
        ME+MYAEATR NRTASPSI PGAPGEKGAPSIQPGDREPIPND G+DYSLRDND+RKHLT+KKK+ASREP+DS SYSR+FSNSNLKAQSKYKPL PEA+I
Subjt:  MEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVI

Query:  TREEFDLMKHRFDE
        TREEFDLMKH+F E
Subjt:  TREEFDLMKHRFDE

XP_022155139.1 uncharacterized protein LOC111022280 [Momordica charantia]7.2e-4094.68Show/hide
Query:  PGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE
        PGAPGEKGAPSIQPG+REPIPNDEGVDYSLRDNDLRKHLTDKKKKAS EP+DS SYSREFSNSNLKAQSKYKPLIPEAVI REEFDLMKHRFDE
Subjt:  PGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE

XP_022157897.1 uncharacterized protein LOC111024503 [Momordica charantia]5.2e-1488Show/hide
Query:  KASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE
        +ASRE +DSPSYSREFSNS+ KAQSKYKPL PEAVITREEFDLMKHRFDE
Subjt:  KASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]9.5e-1640.96Show/hide
Query:  PRLPPTHSKPSKANRGRGGTSRKTSQRANQAADPEALSTLQRELDDMRHRLRTMEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVD
        P L P H KP KANRGRGG SR+T+  A  A   E    LQ+E++ MR ++ TMEEMY E  +     S S    A  E+G                   
Subjt:  PRLPPTHSKPSKANRGRGGTSRKTSQRANQAADPEALSTLQRELDDMRHRLRTMEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVD

Query:  YSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFD
              DLR HL+ K+  + R+ + SPS S +  NSN +A+S Y P++PE VITREEFD +K +FD
Subjt:  YSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFD

TrEMBL top hitse value%identityAlignment
A0A6J1D8C0 uncharacterized protein LOC1110185613.2e-1767.44Show/hide
Query:  APSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE
        A S    +R  +  D G     RD D R  + D+KK+ASREP+DSPSYSREFSNS+LKAQSKYKPL PEAVITREEFDLMKHRFDE
Subjt:  APSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE

A0A6J1DNM4 Ribonuclease H3.8e-4786.84Show/hide
Query:  MEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVI
        ME+MYAEATR NRTASPSI PGAPGEKGAPSIQPGDREPIPND G+DYSLRDND+RKHLT+KKK+ASREP+DS SYSR+FSNSNLKAQSKYKPL PEA+I
Subjt:  MEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVI

Query:  TREEFDLMKHRFDE
        TREEFDLMKH+F E
Subjt:  TREEFDLMKHRFDE

A0A6J1DPC9 uncharacterized protein LOC1110222803.5e-4094.68Show/hide
Query:  PGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE
        PGAPGEKGAPSIQPG+REPIPNDEGVDYSLRDNDLRKHLTDKKKKAS EP+DS SYSREFSNSNLKAQSKYKPLIPEAVI REEFDLMKHRFDE
Subjt:  PGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE

A0A6J1DVR0 uncharacterized protein LOC1110245032.5e-1488Show/hide
Query:  KASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE
        +ASRE +DSPSYSREFSNS+ KAQSKYKPL PEAVITREEFDLMKHRFDE
Subjt:  KASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE

A0A6J1DZJ1 uncharacterized protein LOC1110257384.6e-1640.96Show/hide
Query:  PRLPPTHSKPSKANRGRGGTSRKTSQRANQAADPEALSTLQRELDDMRHRLRTMEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVD
        P L P H KP KANRGRGG SR+T+  A  A   E    LQ+E++ MR ++ TMEEMY E  +     S S    A  E+G                   
Subjt:  PRLPPTHSKPSKANRGRGGTSRKTSQRANQAADPEALSTLQRELDDMRHRLRTMEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVD

Query:  YSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFD
              DLR HL+ K+  + R+ + SPS S +  NSN +A+S Y P++PE VITREEFD +K +FD
Subjt:  YSLRDNDLRKHLTDKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGATACACACACCATAGCTTCGATTTCAACTTCGATTCAACGCTCAATGTTGCAGTAGATGGATCCTTGGTTGAAGAAGAAGAGGGTTTTGAATTTGAA
ACGTCTAGATTTGAAATGGGGGATCCTTACTTCAGCGTCGTTGTGCAGGACCCAACTCAAACCATGTCAAGTTTTTGGTTGTTTCCGGCGATAAATCAGGTCCAC
TCTAGTGTTCAGGTCGGAACCGAAGACCGGTCGAGGACCAGGTCCGAGCAGGGCAAGAGGGAGATCTGCCCGCCATGCGAACCAAGGCTACCACCTACTCACTCC
AAACCCTCAAAAGCCAACAGAGGCCGAGGAGGGACGTCGAGAAAGACCTCCCAAAGGGCCAACCAGGCAGCAGACCCTGAAGCTCTGTCTACTCTTCAGCGCGAG
TTGGATGATATGCGCCATCGGTTGCGCACAATGGAAGAGATGTACGCCGAGGCAACGCGTGTTAACCGAACTGCATCTCCTTCTATAACTCCGGGAGCACCTGGT
GAAAAGGGAGCTCCATCTATCCAACCTGGCGATCGCGAGCCCATTCCTAACGATGAAGGGGTGGATTACAGCTTGCGAGACAATGATCTTAGAAAGCACCTCACT
GATAAGAAGAAGAAAGCCTCTCGGGAACCGAAAGATTCTCCGTCCTACTCCCGAGAGTTCTCCAACTCGAACCTGAAGGCTCAATCGAAGTACAAGCCTCTAATA
CCAGAAGCTGTGATTACCAGGGAAGAATTCGACCTGATGAAACACAGGTTCGATGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAGATACACACACCATAGCTTCGATTTCAACTTCGATTCAACGCTCAATGTTGCAGTAGATGGATCCTTGGTTGAAGAAGAAGAGGGTTTTGAATTTGAA
ACGTCTAGATTTGAAATGGGGGATCCTTACTTCAGCGTCGTTGTGCAGGACCCAACTCAAACCATGTCAAGTTTTTGGTTGTTTCCGGCGATAAATCAGGTCCAC
TCTAGTGTTCAGGTCGGAACCGAAGACCGGTCGAGGACCAGGTCCGAGCAGGGCAAGAGGGAGATCTGCCCGCCATGCGAACCAAGGCTACCACCTACTCACTCC
AAACCCTCAAAAGCCAACAGAGGCCGAGGAGGGACGTCGAGAAAGACCTCCCAAAGGGCCAACCAGGCAGCAGACCCTGAAGCTCTGTCTACTCTTCAGCGCGAG
TTGGATGATATGCGCCATCGGTTGCGCACAATGGAAGAGATGTACGCCGAGGCAACGCGTGTTAACCGAACTGCATCTCCTTCTATAACTCCGGGAGCACCTGGT
GAAAAGGGAGCTCCATCTATCCAACCTGGCGATCGCGAGCCCATTCCTAACGATGAAGGGGTGGATTACAGCTTGCGAGACAATGATCTTAGAAAGCACCTCACT
GATAAGAAGAAGAAAGCCTCTCGGGAACCGAAAGATTCTCCGTCCTACTCCCGAGAGTTCTCCAACTCGAACCTGAAGGCTCAATCGAAGTACAAGCCTCTAATA
CCAGAAGCTGTGATTACCAGGGAAGAATTCGACCTGATGAAACACAGGTTCGATGAGTAG
Protein sequenceShow/hide protein sequence
MMRYTHHSFDFNFDSTLNVAVDGSLVEEEEGFEFETSRFEMGDPYFSVVVQDPTQTMSSFWLFPAINQVHSSVQVGTEDRSRTRSEQGKREICPPCEPRLPPTHS
KPSKANRGRGGTSRKTSQRANQAADPEALSTLQRELDDMRHRLRTMEEMYAEATRVNRTASPSITPGAPGEKGAPSIQPGDREPIPNDEGVDYSLRDNDLRKHLT
DKKKKASREPKDSPSYSREFSNSNLKAQSKYKPLIPEAVITREEFDLMKHRFDE