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Moc03g14450 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14450
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr3:9748056..9750206
RNA-Seq ExpressionMoc03g14450
SyntenyMoc03g14450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]5.0e-3657.75Show/hide
Query:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD
        KLN  NY  WK  +NT+L++DDL                         RW KAN+KA+ +ILAS+S+VLAKKHESM+TAREIMDSL++MFGQ+S Q +HD
Subjt:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD

Query:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        ALK+IYN+RM +G   REHVLN+MVHFNVAE+N AVIDE SQ
Subjt:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]5.0e-3657.75Show/hide
Query:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD
        KLN  NY  WK  +NT+L++DDL                         RW KAN+KA+ +ILAS+S+VLAKKHESM+TAREIMDSL++MFGQ+S Q +HD
Subjt:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD

Query:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        ALK+IYN+RM +G   REHVLN+MVHFNVAE+N AVIDE SQ
Subjt:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]2.8e-3965.25Show/hide
Query:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH
        ++LN +NY QWK+NLNTILV+DDL                         RWIKANDKAKV+ILASISDVLAKKHE  +TA+EIMDSL+ MFGQ S QARH
Subjt:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH

Query:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEE
        +ALKFIYNSRMK+G+  REHVLNLMVHFNVAE N AVIDE+
Subjt:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEE

XP_022158062.1 uncharacterized protein LOC111024637 [Momordica charantia]2.3e-3662.24Show/hide
Query:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH
        +KLN +NY QWK+N+NTIL++DDL                         RWIKANDKAKV ILASISDVLAKKHE+ V  +EIMDSL+ MFGQ S QARH
Subjt:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH

Query:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        +AL  IYNSRMKK +  REHVLNLMVHFNVAE N  VIDE+SQ
Subjt:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

XP_022158197.1 uncharacterized protein LOC111024734 [Momordica charantia]7.5e-4064.34Show/hide
Query:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH
        +KLN +NY QWK+NLNTILV+DDL                         RWIK+NDKAKV+ILASISDVLAKKHE  VT +EIMDSL+ MFGQ S+QARH
Subjt:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH

Query:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        +ALKF+YNSRMK+G+  REHVLNLMVHFNVAE N  VIDE+SQ
Subjt:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.4e-3657.75Show/hide
Query:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD
        KLN  NY  WK  +NT+L++DDL                         RW KAN+KA+ +ILAS+S+VLAKKHESM+TAREIMDSL++MFGQ+S Q +HD
Subjt:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD

Query:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        ALK+IYN+RM +G   REHVLN+MVHFNVAE+N AVIDE SQ
Subjt:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

A0A5D3CPJ6 Gag/pol protein2.4e-3657.75Show/hide
Query:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD
        KLN  NY  WK  +NT+L++DDL                         RW KAN+KA+ +ILAS+S+VLAKKHESM+TAREIMDSL++MFGQ+S Q +HD
Subjt:  KLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARHD

Query:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        ALK+IYN+RM +G   REHVLN+MVHFNVAE+N AVIDE SQ
Subjt:  ALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

A0A6J1DFZ2 uncharacterized protein LOC1110200951.4e-3965.25Show/hide
Query:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH
        ++LN +NY QWK+NLNTILV+DDL                         RWIKANDKAKV+ILASISDVLAKKHE  +TA+EIMDSL+ MFGQ S QARH
Subjt:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH

Query:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEE
        +ALKFIYNSRMK+G+  REHVLNLMVHFNVAE N AVIDE+
Subjt:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEE

A0A6J1DW68 uncharacterized protein LOC1110246371.1e-3662.24Show/hide
Query:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH
        +KLN +NY QWK+N+NTIL++DDL                         RWIKANDKAKV ILASISDVLAKKHE+ V  +EIMDSL+ MFGQ S QARH
Subjt:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH

Query:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        +AL  IYNSRMKK +  REHVLNLMVHFNVAE N  VIDE+SQ
Subjt:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

A0A6J1DWL0 uncharacterized protein LOC1110247343.6e-4064.34Show/hide
Query:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH
        +KLN +NY QWK+NLNTILV+DDL                         RWIK+NDKAKV+ILASISDVLAKKHE  VT +EIMDSL+ MFGQ S+QARH
Subjt:  RKLNCKNYTQWKTNLNTILVVDDL-------------------------RWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQARH

Query:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ
        +ALKF+YNSRMK+G+  REHVLNLMVHFNVAE N  VIDE+SQ
Subjt:  DALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCAGCGCTTAGGCGCTGTCCTGCAGCACCGCAGCACTGGGGTTGGGGGCCTAGGCATCGGCATGTCTACTTCTATTATTGCCCTGCTTGCCGCCGAAAA
CTTAACTGCAAAAATTACACACAATGGAAAACGAACCTTAACACGATACTTGTGGTAGATGATCTTAGATGGATCAAGGCCAATGACAAGGCCAAGGTCCACATC
TTGGCAAGCATATCTGATGTGCTGGCTAAGAAGCATGAGAGCATGGTCACCGCAAGGGAGATCATGGACTCGTTGAGGGACATGTTTGGACAGTCGTCCATTCAA
GCCCGACACGATGCCCTCAAGTTCATTTACAATTCCCGCATGAAAAAGGGAACATTAGGGCGAGAACATGTTCTCAATCTGATGGTCCACTTTAATGTGGCTGAA
GTGAACGACGCTGTCATAGACGAGGAGAGTCAGGATAGAGTACAACCTTACCACGCTCTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCAGCGCTTAGGCGCTGTCCTGCAGCACCGCAGCACTGGGGTTGGGGGCCTAGGCATCGGCATGTCTACTTCTATTATTGCCCTGCTTGCCGCCGAAAA
CTTAACTGCAAAAATTACACACAATGGAAAACGAACCTTAACACGATACTTGTGGTAGATGATCTTAGATGGATCAAGGCCAATGACAAGGCCAAGGTCCACATC
TTGGCAAGCATATCTGATGTGCTGGCTAAGAAGCATGAGAGCATGGTCACCGCAAGGGAGATCATGGACTCGTTGAGGGACATGTTTGGACAGTCGTCCATTCAA
GCCCGACACGATGCCCTCAAGTTCATTTACAATTCCCGCATGAAAAAGGGAACATTAGGGCGAGAACATGTTCTCAATCTGATGGTCCACTTTAATGTGGCTGAA
GTGAACGACGCTGTCATAGACGAGGAGAGTCAGGATAGAGTACAACCTTACCACGCTCTTAAATGA
Protein sequenceShow/hide protein sequence
MGAALRRCPAAPQHWGWGPRHRHVYFYYCPACRRKLNCKNYTQWKTNLNTILVVDDLRWIKANDKAKVHILASISDVLAKKHESMVTAREIMDSLRDMFGQSSIQ
ARHDALKFIYNSRMKKGTLGREHVLNLMVHFNVAEVNDAVIDEESQDRVQPYHALK