; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g14480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr3:9761895..9764937
RNA-Seq ExpressionMoc03g14480
SyntenyMoc03g14480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]9.1e-8135.64Show/hide
Query:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM
        M   KA++ ++ +S+ ++G +T          + Q   +    L  L E+  +   ++  NPLF            + + ++VS+MM D  T +  MAEM
Subjt:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM

Query:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN
        E+K+  LMK VEERD+EIA+LK+Q++  + +ESSQT  +K  DKGK + +ENQ  Q S S+ASLSVQQLQDMI N+IRAQY G  Q+S +YSKPYTKRI+
Subjt:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN

Query:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------
        +LRMP GYQP KFQ FDGKGNPKQHI HFVETCENAG+RGDQLV+QFVR+LKGNA                                             
Subjt:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------

Query:  ----------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVLDLEKESKSVEKTS-------NEFF----GPISVRSQRKTSRNAIKDVVKS
                        L GIKPRTFEELATRAHDM+LSIANRG KD LV     +   +  T        NE       P+   S+RK +++      K 
Subjt:  ----------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVLDLEKESKSVEKTS-------NEFF----GPISVRSQRKTSRNAIKDVVKS

Query:  IDQGEENWATVTRQKKQKQSFAWNKSSMLSKEHEHQGKKDSRKPKSERKE--------NKDSFRPKISATLKEIFPKKFFYIKKKKENL-----------
           G+E     T +++QK+ + +  S +     +   K+  + P+ +R E        N   +   IS  +++ F  K    K  +EN            
Subjt:  IDQGEENWATVTRQKKQKQSFAWNKSSMLSKEHEHQGKKDSRKPKSERKE--------NKDSFRPKISATLKEIFPKKFFYIKKKKENL-----------

Query:  -----------------------------------------------------------------------------------------ASSHYINVEEV
                                                                                                   ++Y + EE+
Subjt:  -----------------------------------------------------------------------------------------ASSHYINVEEV

Query:  DNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKI
        DN    +QR SVF  IKP TTR SVFQR+SMAT KEENQC      Q S F+RLS+S SKK+  ST  FD  ++  DQ ++ MKT+KAK F + NDD KI
Subjt:  DNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKI

Query:  HSIVHSR
        HS V SR
Subjt:  HSIVHSR

KAA0033746.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.7e-8435.58Show/hide
Query:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM
        M   KA++ ++  S+ ++G +T          + Q   +    L  L E+  +   ++  NPLF            + + ++VS+MM D  T +  M EM
Subjt:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM

Query:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN
        E+K+  LMK  EERD+EIA+LK+Q++     ESSQT  +K  DKGK + QENQ  Q S S+ASLSVQQLQDMI N+IRAQY G  Q+S +YSK YTKRI+
Subjt:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN

Query:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------
        +LRMP GYQPPKFQ FDGKGNPKQHIAHFVETCENAG+RGDQLV+QFVR+LKGNA                                             
Subjt:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------

Query:  -------LTGIKPRTFEELATRAHDMELSIANRGSKD---------------------------------------------------------------
               L GIKPRTFEEL+TRAHDMELSIAN G+KD                                                               
Subjt:  -------LTGIKPRTFEELATRAHDMELSIANRGSKD---------------------------------------------------------------

Query:  ---------------------------------------------------------------SLVLDLEKESK--------------SVEKTSNEF---
                                                                        L+L L +E+K              +V  TS+     
Subjt:  ---------------------------------------------------------------SLVLDLEKESK--------------SVEKTSNEF---

Query:  --------------FGPISVRSQRKT-SRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDS
                      F PI VR Q+KT + N+      S D+GEE W  VT +K+      Q  S    K S  +  H+ +G+++ +  KPK  + ++KD 
Subjt:  --------------FGPISVRSQRKT-SRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDS

Query:  FRPKISATLKEIFPKKFF--YIKKKKENLA---------SSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVF
        F+P+ S  L E  P+ F   + +K  E  A          ++Y + EEVDN    +QR  VF RIKP T R SVFQR+SMA  +EENQC  S   + S F
Subjt:  FRPKISATLKEIFPKKFF--YIKKKKENLA---------SSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVF

Query:  QRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR
        +RLS+ST KK+  STSAFD  ++I DQ ++ MK++K K F + NDD KIHS V SR
Subjt:  QRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-8338.75Show/hide
Query:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA
        +P+I+S+M+T+  T + +MAE+EKK+  LMK VEERDYEIA LKN IE++D AESS    +K  DKGK + QE+Q Q STSIASLSVQQLQ+MI ++I+ 
Subjt:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA

Query:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA------------------------
        QY G +Q+  LY KPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+AHF++TCE AGTRGD LVKQFVRTLKGNA                        
Subjt:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA------------------------

Query:  ---------------------------------------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVL---
                                                                       L GIKPRTFEELATRAHDMELSIANRG+KD L+    
Subjt:  ---------------------------------------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVL---

Query:  -------DLEKESKSVEKTSNEFFG-PISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKKQK-------------QSFAWNKSSML--SKEHEHQGK
               D +K + SV K S      P+   S+RK ++      ++    G+E   +  +++++K             +    N+   L   K  E  GK
Subjt:  -------DLEKESKSVEKTSNEFFG-PISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKKQK-------------QSFAWNKSSML--SKEHEHQGK

Query:  KD----------------------------SRKPKSE--------------------RKENKDSFRPKISATLKEIFPKKFFYIKKKKENL---------
         D                            +R+ K E                    + +++D  + + S TL E  P+ F  ++   E +         
Subjt:  KD----------------------------SRKPKSE--------------------RKENKDSFRPKISATLKEIFPKKFFYIKKKKENL---------

Query:  ----ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKT
              ++Y + +EV+N     QR SVF RIKPSTTR SVFQR+S+AT +EENQC   I  + S  +RLS+ST KK+  STS+FD  ++  DQ ++ MK+
Subjt:  ----ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKT

Query:  VKAKSFAKVNDDKKIHSIVHSR
         KAK F + NDD KIHS V SR
Subjt:  VKAKSFAKVNDDKKIHSIVHSR

KAA0065303.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.4e-9140.6Show/hide
Query:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA
        +P+I+S+M+ +  T + +MAE+EKK+  LMK VEERDYEIA LKN IE++D AESS    +K  DKGK + QE+Q Q STSIASLSVQQLQ+MI ++I+ 
Subjt:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA

Query:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNAL-----------------------
        QY G +Q+  LYSKPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+A+F+ETCE AGTRGD LVKQFVRTLKGNA                        
Subjt:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNAL-----------------------

Query:  -------TGIKPRTFEELATRAHDMELSIANRGSKD----------------------------------------------------------------
                GIKPRTFEELATRAHDMELSIANRG+KD                                                                
Subjt:  -------TGIKPRTFEELATRAHDMELSIANRGSKD----------------------------------------------------------------

Query:  ------------------------SLVLDLEKESK--------------SVEKTSNE--------------FFG---PISVR-SQRKTSRNAIKDVVKSI
                                 L+L L +E K              ++E TSN                FG   PI V   QR  + N+        
Subjt:  ------------------------SLVLDLEKESK--------------SVEKTSNE--------------FFG---PISVR-SQRKTSRNAIKDVVKSI

Query:  DQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL------------
        D G E W TVTRQK       QKQ     K +  S  ++ +G+++ +   PK  + +++D  + + S TL E  P+ F  ++   E +            
Subjt:  DQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL------------

Query:  -ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKA
           ++Y + +EV+N     QR S F RIKPSTTR SVFQR+SMAT +EENQC   I  + S F+RLS+STSKK+  STSAFD  ++  DQ ++ MK+ KA
Subjt:  -ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKA

Query:  KSFAKVNDDKKIHSIVHSRGLVPRGCVSRTISI
        K F K NDD KIHS V S       C+ R +S+
Subjt:  KSFAKVNDDKKIHSIVHSRGLVPRGCVSRTISI

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.0e-8434.36Show/hide
Query:  TAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLFDLN-------------PDIVSIMMTDASTMDEKMAEMEKKLAAL
        T+  +S I     T+ CS E Q  E      VA  +        +   ++  NP  D +             P+I+S+M+T+  T + +MAE+EKK+  L
Subjt:  TAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLFDLN-------------PDIVSIMMTDASTMDEKMAEMEKKLAAL

Query:  MKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRINDLRMPAGY
        MK VEERDYEIA LKN IE++D AESS    +K  DKGK + QE+Q Q STSIASLSVQQLQ+MI ++I+ QY G +Q+  LYSKPYTKRI++LRMP GY
Subjt:  MKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRINDLRMPAGY

Query:  QPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA-----------------------------------------------------
        QPPKFQ FDGKGNPKQH+AHF+ETCE AGTRGD LVKQFVRTLKGNA                                                     
Subjt:  QPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA-----------------------------------------------------

Query:  ----------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKD------------------------------------
                                          L GIKPRTFEELATRAHDMELSI NRG+KD                                    
Subjt:  ----------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKD------------------------------------

Query:  -----------------------------------------------------------------------------------------SLVLDLEKESK
                                                                                                  L+L L +E K
Subjt:  -----------------------------------------------------------------------------------------SLVLDLEKESK

Query:  --------------SVEKTSNE--------------FFGPISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHE
                      ++E TSN                FG   +  QR  + N+        D  +E W TVTRQK       QK+S    K +  S  H+
Subjt:  --------------SVEKTSNE--------------FFGPISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHE

Query:  HQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL-------------ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQ
         +G+++ +   PK  + +++D  + + S TL E  P+ F  ++   E +              +++Y + +EV+N     QR SVF RIKPSTTR SVFQ
Subjt:  HQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL-------------ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQ

Query:  RMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR
        R+SMAT +EENQC   I  + S F+RLS+S SKKN  STSAFD  ++  DQ ++ MK++KAK F + NDD KIHS V SR
Subjt:  RMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein4.4e-8135.64Show/hide
Query:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM
        M   KA++ ++ +S+ ++G +T          + Q   +    L  L E+  +   ++  NPLF            + + ++VS+MM D  T +  MAEM
Subjt:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM

Query:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN
        E+K+  LMK VEERD+EIA+LK+Q++  + +ESSQT  +K  DKGK + +ENQ  Q S S+ASLSVQQLQDMI N+IRAQY G  Q+S +YSKPYTKRI+
Subjt:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN

Query:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------
        +LRMP GYQP KFQ FDGKGNPKQHI HFVETCENAG+RGDQLV+QFVR+LKGNA                                             
Subjt:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------

Query:  ----------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVLDLEKESKSVEKTS-------NEFF----GPISVRSQRKTSRNAIKDVVKS
                        L GIKPRTFEELATRAHDM+LSIANRG KD LV     +   +  T        NE       P+   S+RK +++      K 
Subjt:  ----------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVLDLEKESKSVEKTS-------NEFF----GPISVRSQRKTSRNAIKDVVKS

Query:  IDQGEENWATVTRQKKQKQSFAWNKSSMLSKEHEHQGKKDSRKPKSERKE--------NKDSFRPKISATLKEIFPKKFFYIKKKKENL-----------
           G+E     T +++QK+ + +  S +     +   K+  + P+ +R E        N   +   IS  +++ F  K    K  +EN            
Subjt:  IDQGEENWATVTRQKKQKQSFAWNKSSMLSKEHEHQGKKDSRKPKSERKE--------NKDSFRPKISATLKEIFPKKFFYIKKKKENL-----------

Query:  -----------------------------------------------------------------------------------------ASSHYINVEEV
                                                                                                   ++Y + EE+
Subjt:  -----------------------------------------------------------------------------------------ASSHYINVEEV

Query:  DNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKI
        DN    +QR SVF  IKP TTR SVFQR+SMAT KEENQC      Q S F+RLS+S SKK+  ST  FD  ++  DQ ++ MKT+KAK F + NDD KI
Subjt:  DNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKI

Query:  HSIVHSR
        HS V SR
Subjt:  HSIVHSR

A0A5A7SUW1 Retrotransposon gag protein3.3e-8435.58Show/hide
Query:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM
        M   KA++ ++  S+ ++G +T          + Q   +    L  L E+  +   ++  NPLF            + + ++VS+MM D  T +  M EM
Subjt:  MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLF------------DLNPDIVSIMMTDASTMDEKMAEM

Query:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN
        E+K+  LMK  EERD+EIA+LK+Q++     ESSQT  +K  DKGK + QENQ  Q S S+ASLSVQQLQDMI N+IRAQY G  Q+S +YSK YTKRI+
Subjt:  EKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQ-SQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRIN

Query:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------
        +LRMP GYQPPKFQ FDGKGNPKQHIAHFVETCENAG+RGDQLV+QFVR+LKGNA                                             
Subjt:  DLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA---------------------------------------------

Query:  -------LTGIKPRTFEELATRAHDMELSIANRGSKD---------------------------------------------------------------
               L GIKPRTFEEL+TRAHDMELSIAN G+KD                                                               
Subjt:  -------LTGIKPRTFEELATRAHDMELSIANRGSKD---------------------------------------------------------------

Query:  ---------------------------------------------------------------SLVLDLEKESK--------------SVEKTSNEF---
                                                                        L+L L +E+K              +V  TS+     
Subjt:  ---------------------------------------------------------------SLVLDLEKESK--------------SVEKTSNEF---

Query:  --------------FGPISVRSQRKT-SRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDS
                      F PI VR Q+KT + N+      S D+GEE W  VT +K+      Q  S    K S  +  H+ +G+++ +  KPK  + ++KD 
Subjt:  --------------FGPISVRSQRKT-SRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDS

Query:  FRPKISATLKEIFPKKFF--YIKKKKENLA---------SSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVF
        F+P+ S  L E  P+ F   + +K  E  A          ++Y + EEVDN    +QR  VF RIKP T R SVFQR+SMA  +EENQC  S   + S F
Subjt:  FRPKISATLKEIFPKKFF--YIKKKKENLA---------SSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVF

Query:  QRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR
        +RLS+ST KK+  STSAFD  ++I DQ ++ MK++K K F + NDD KIHS V SR
Subjt:  QRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR

A0A5A7URH1 Ty3-gypsy retrotransposon protein5.6e-8438.75Show/hide
Query:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA
        +P+I+S+M+T+  T + +MAE+EKK+  LMK VEERDYEIA LKN IE++D AESS    +K  DKGK + QE+Q Q STSIASLSVQQLQ+MI ++I+ 
Subjt:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA

Query:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA------------------------
        QY G +Q+  LY KPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+AHF++TCE AGTRGD LVKQFVRTLKGNA                        
Subjt:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA------------------------

Query:  ---------------------------------------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVL---
                                                                       L GIKPRTFEELATRAHDMELSIANRG+KD L+    
Subjt:  ---------------------------------------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKDSLVL---

Query:  -------DLEKESKSVEKTSNEFFG-PISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKKQK-------------QSFAWNKSSML--SKEHEHQGK
               D +K + SV K S      P+   S+RK ++      ++    G+E   +  +++++K             +    N+   L   K  E  GK
Subjt:  -------DLEKESKSVEKTSNEFFG-PISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKKQK-------------QSFAWNKSSML--SKEHEHQGK

Query:  KD----------------------------SRKPKSE--------------------RKENKDSFRPKISATLKEIFPKKFFYIKKKKENL---------
         D                            +R+ K E                    + +++D  + + S TL E  P+ F  ++   E +         
Subjt:  KD----------------------------SRKPKSE--------------------RKENKDSFRPKISATLKEIFPKKFFYIKKKKENL---------

Query:  ----ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKT
              ++Y + +EV+N     QR SVF RIKPSTTR SVFQR+S+AT +EENQC   I  + S  +RLS+ST KK+  STS+FD  ++  DQ ++ MK+
Subjt:  ----ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKT

Query:  VKAKSFAKVNDDKKIHSIVHSR
         KAK F + NDD KIHS V SR
Subjt:  VKAKSFAKVNDDKKIHSIVHSR

A0A5A7VAV4 Retrotransposon gag protein2.1e-9140.6Show/hide
Query:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA
        +P+I+S+M+ +  T + +MAE+EKK+  LMK VEERDYEIA LKN IE++D AESS    +K  DKGK + QE+Q Q STSIASLSVQQLQ+MI ++I+ 
Subjt:  NPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRA

Query:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNAL-----------------------
        QY G +Q+  LYSKPYTKRI++LRMP GYQPPKFQ FDGKGNPKQH+A+F+ETCE AGTRGD LVKQFVRTLKGNA                        
Subjt:  QYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNAL-----------------------

Query:  -------TGIKPRTFEELATRAHDMELSIANRGSKD----------------------------------------------------------------
                GIKPRTFEELATRAHDMELSIANRG+KD                                                                
Subjt:  -------TGIKPRTFEELATRAHDMELSIANRGSKD----------------------------------------------------------------

Query:  ------------------------SLVLDLEKESK--------------SVEKTSNE--------------FFG---PISVR-SQRKTSRNAIKDVVKSI
                                 L+L L +E K              ++E TSN                FG   PI V   QR  + N+        
Subjt:  ------------------------SLVLDLEKESK--------------SVEKTSNE--------------FFG---PISVR-SQRKTSRNAIKDVVKSI

Query:  DQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL------------
        D G E W TVTRQK       QKQ     K +  S  ++ +G+++ +   PK  + +++D  + + S TL E  P+ F  ++   E +            
Subjt:  DQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHEHQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL------------

Query:  -ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKA
           ++Y + +EV+N     QR S F RIKPSTTR SVFQR+SMAT +EENQC   I  + S F+RLS+STSKK+  STSAFD  ++  DQ ++ MK+ KA
Subjt:  -ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKA

Query:  KSFAKVNDDKKIHSIVHSRGLVPRGCVSRTISI
        K F K NDD KIHS V S       C+ R +S+
Subjt:  KSFAKVNDDKKIHSIVHSRGLVPRGCVSRTISI

A0A5D3BX77 Retrotransposon gag protein1.9e-8434.36Show/hide
Query:  TAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLFDLN-------------PDIVSIMMTDASTMDEKMAEMEKKLAAL
        T+  +S I     T+ CS E Q  E      VA  +        +   ++  NP  D +             P+I+S+M+T+  T + +MAE+EKK+  L
Subjt:  TAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLFDLN-------------PDIVSIMMTDASTMDEKMAEMEKKLAAL

Query:  MKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRINDLRMPAGY
        MK VEERDYEIA LKN IE++D AESS    +K  DKGK + QE+Q Q STSIASLSVQQLQ+MI ++I+ QY G +Q+  LYSKPYTKRI++LRMP GY
Subjt:  MKTVEERDYEIASLKNQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRINDLRMPAGY

Query:  QPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA-----------------------------------------------------
        QPPKFQ FDGKGNPKQH+AHF+ETCE AGTRGD LVKQFVRTLKGNA                                                     
Subjt:  QPPKFQHFDGKGNPKQHIAHFVETCENAGTRGDQLVKQFVRTLKGNA-----------------------------------------------------

Query:  ----------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKD------------------------------------
                                          L GIKPRTFEELATRAHDMELSI NRG+KD                                    
Subjt:  ----------------------------------LTGIKPRTFEELATRAHDMELSIANRGSKD------------------------------------

Query:  -----------------------------------------------------------------------------------------SLVLDLEKESK
                                                                                                  L+L L +E K
Subjt:  -----------------------------------------------------------------------------------------SLVLDLEKESK

Query:  --------------SVEKTSNE--------------FFGPISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHE
                      ++E TSN                FG   +  QR  + N+        D  +E W TVTRQK       QK+S    K +  S  H+
Subjt:  --------------SVEKTSNE--------------FFGPISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQKK------QKQSFAWNKSSMLSKEHE

Query:  HQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL-------------ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQ
         +G+++ +   PK  + +++D  + + S TL E  P+ F  ++   E +              +++Y + +EV+N     QR SVF RIKPSTTR SVFQ
Subjt:  HQGKKDSR--KPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENL-------------ASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQ

Query:  RMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR
        R+SMAT +EENQC   I  + S F+RLS+S SKKN  STSAFD  ++  DQ ++ MK++KAK F + NDD KIHS V SR
Subjt:  RMSMATTKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTAAAAAGGCTTCTACAACAGCTGCTTACATGAGTAACATTCATATGGGTCATATCACCTATGGTTGCTCTGATGAATTCCAACTACGGGAACATCAAACTCT
TCCTGTTGTTGCAAACAAATTAATGATGCTGCAAGAAACAGCTATTGAAAATGAGTTTCTTGTTAATCATAACCCCTTATTTGATCTTAACCCTGACATTGTCTCTATTA
TGATGACTGATGCAAGCACTATGGATGAAAAAATGGCTGAAATGGAAAAGAAGCTCGCTGCATTGATGAAGACAGTGGAAGAAAGAGATTATGAAATCGCTTCCTTGAAG
AATCAGATTGAAAACAAAGATGTTGCTGAGTCGAGTCAAACCCTTGCTATTAAGATAAATGATAAGGGAAAGACTATCGCTCAAGAAAATCAATCGCAATATTCCACTTC
GATCGCTTCGCTGTCTGTTCAGCAGCTCCAAGATATGATCACGAACACGATCAGAGCGCAATACGACGGATCTTCTCAAAGCTCCCTCTTGTATTCTAAGCCATATACTA
AGAGAATTAATGATCTGAGAATGCCTGCTGGATACCAACCTCCAAAATTCCAACATTTCGATGGGAAAGGCAATCCCAAACAACATATTGCTCACTTCGTCGAAACTTGT
GAGAATGCTGGTACAAGAGGCGATCAATTGGTCAAGCAGTTCGTCAGAACGCTAAAGGGAAACGCCTTGACTGGTATAAAACCTCGCACCTTTGAAGAGCTAGCAACTCG
TGCTCACGATATGGAGCTAAGCATTGCTAATCGAGGAAGTAAAGATTCTTTAGTGCTGGACTTAGAGAAAGAAAGCAAAAGTGTTGAGAAAACTTCAAATGAATTTTTTG
GTCCTATATCTGTTCGATCTCAACGGAAGACTTCAAGAAATGCCATTAAAGATGTTGTCAAATCTATCGATCAGGGAGAGGAAAACTGGGCTACTGTGACTCGTCAGAAG
AAACAAAAACAAAGTTTTGCTTGGAATAAGTCATCTATGCTCAGCAAAGAGCATGAACACCAAGGAAAGAAGGATTCAAGGAAGCCTAAATCAGAGAGGAAAGAAAATAA
AGACTCCTTTCGACCCAAGATATCGGCGACCTTAAAAGAAATTTTCCCAAAAAAATTCTTCTATATCAAAAAGAAGAAAGAAAATCTTGCAAGTTCACATTACATAAATG
TGGAAGAGGTTGACAACTTTAAAATAACTAGGCAAAGAGCTTCTGTCTTCGGTCGTATCAAGCCTTCAACTACTCGACCTTCGGTCTTCCAGAGGATGAGTATGGCCACA
ACAAAAGAAGAAAATCAATGTTTTATTTCCATCTCCATTCAACCTTCAGTCTTTCAAAGGCTAAGCGTCTCCACGTCAAAGAAAAATCATTCTTCGACATCTGCTTTTGA
TTGTTCAGAAGTGATAGGCGATCAATTTGAAAAAACGATGAAGACCGTGAAGGCGAAATCATTTGCTAAAGTGAATGATGACAAGAAAATTCACAGCATTGTTCATTCCC
GTGGCCTTGTCCCGCGAGGATGTGTGAGTCGGACGATATCCATATACAGGCGTCATCCCCGAAAGGATGGTAGCCGTGAGGGGTACTTCACCAAATTAGGTGGCCTTGTC
CCGCCAGGATGTGTGAGCCGGACGATATCCCTATATAGGCGTCATCCCCGAAAGGATGGTAACCGTGAGGGATACTTCACCAAATTAGGTGGTCTTGTCCCGCGAGGATA
TGTGAGCCGGACGATATCTCTATATAGGCGTCATCCCCGAAAGGATGGTAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCAAGGATGTGTGAGCTGGG
CGATATCCCTATATAGGCGTCATCCCCGAAAGGATGGTAGCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTAAAAAGGCTTCTACAACAGCTGCTTACATGAGTAACATTCATATGGGTCATATCACCTATGGTTGCTCTGATGAATTCCAACTACGGGAACATCAAACTCT
TCCTGTTGTTGCAAACAAATTAATGATGCTGCAAGAAACAGCTATTGAAAATGAGTTTCTTGTTAATCATAACCCCTTATTTGATCTTAACCCTGACATTGTCTCTATTA
TGATGACTGATGCAAGCACTATGGATGAAAAAATGGCTGAAATGGAAAAGAAGCTCGCTGCATTGATGAAGACAGTGGAAGAAAGAGATTATGAAATCGCTTCCTTGAAG
AATCAGATTGAAAACAAAGATGTTGCTGAGTCGAGTCAAACCCTTGCTATTAAGATAAATGATAAGGGAAAGACTATCGCTCAAGAAAATCAATCGCAATATTCCACTTC
GATCGCTTCGCTGTCTGTTCAGCAGCTCCAAGATATGATCACGAACACGATCAGAGCGCAATACGACGGATCTTCTCAAAGCTCCCTCTTGTATTCTAAGCCATATACTA
AGAGAATTAATGATCTGAGAATGCCTGCTGGATACCAACCTCCAAAATTCCAACATTTCGATGGGAAAGGCAATCCCAAACAACATATTGCTCACTTCGTCGAAACTTGT
GAGAATGCTGGTACAAGAGGCGATCAATTGGTCAAGCAGTTCGTCAGAACGCTAAAGGGAAACGCCTTGACTGGTATAAAACCTCGCACCTTTGAAGAGCTAGCAACTCG
TGCTCACGATATGGAGCTAAGCATTGCTAATCGAGGAAGTAAAGATTCTTTAGTGCTGGACTTAGAGAAAGAAAGCAAAAGTGTTGAGAAAACTTCAAATGAATTTTTTG
GTCCTATATCTGTTCGATCTCAACGGAAGACTTCAAGAAATGCCATTAAAGATGTTGTCAAATCTATCGATCAGGGAGAGGAAAACTGGGCTACTGTGACTCGTCAGAAG
AAACAAAAACAAAGTTTTGCTTGGAATAAGTCATCTATGCTCAGCAAAGAGCATGAACACCAAGGAAAGAAGGATTCAAGGAAGCCTAAATCAGAGAGGAAAGAAAATAA
AGACTCCTTTCGACCCAAGATATCGGCGACCTTAAAAGAAATTTTCCCAAAAAAATTCTTCTATATCAAAAAGAAGAAAGAAAATCTTGCAAGTTCACATTACATAAATG
TGGAAGAGGTTGACAACTTTAAAATAACTAGGCAAAGAGCTTCTGTCTTCGGTCGTATCAAGCCTTCAACTACTCGACCTTCGGTCTTCCAGAGGATGAGTATGGCCACA
ACAAAAGAAGAAAATCAATGTTTTATTTCCATCTCCATTCAACCTTCAGTCTTTCAAAGGCTAAGCGTCTCCACGTCAAAGAAAAATCATTCTTCGACATCTGCTTTTGA
TTGTTCAGAAGTGATAGGCGATCAATTTGAAAAAACGATGAAGACCGTGAAGGCGAAATCATTTGCTAAAGTGAATGATGACAAGAAAATTCACAGCATTGTTCATTCCC
GTGGCCTTGTCCCGCGAGGATGTGTGAGTCGGACGATATCCATATACAGGCGTCATCCCCGAAAGGATGGTAGCCGTGAGGGGTACTTCACCAAATTAGGTGGCCTTGTC
CCGCCAGGATGTGTGAGCCGGACGATATCCCTATATAGGCGTCATCCCCGAAAGGATGGTAACCGTGAGGGATACTTCACCAAATTAGGTGGTCTTGTCCCGCGAGGATA
TGTGAGCCGGACGATATCTCTATATAGGCGTCATCCCCGAAAGGATGGTAGCCGTGAGGGATACTTCACCAAATTAGGTGGCCTTGTCCCGCAAGGATGTGTGAGCTGGG
CGATATCCCTATATAGGCGTCATCCCCGAAAGGATGGTAGCCATTAG
Protein sequenceShow/hide protein sequence
MEFKKASTTAAYMSNIHMGHITYGCSDEFQLREHQTLPVVANKLMMLQETAIENEFLVNHNPLFDLNPDIVSIMMTDASTMDEKMAEMEKKLAALMKTVEERDYEIASLK
NQIENKDVAESSQTLAIKINDKGKTIAQENQSQYSTSIASLSVQQLQDMITNTIRAQYDGSSQSSLLYSKPYTKRINDLRMPAGYQPPKFQHFDGKGNPKQHIAHFVETC
ENAGTRGDQLVKQFVRTLKGNALTGIKPRTFEELATRAHDMELSIANRGSKDSLVLDLEKESKSVEKTSNEFFGPISVRSQRKTSRNAIKDVVKSIDQGEENWATVTRQK
KQKQSFAWNKSSMLSKEHEHQGKKDSRKPKSERKENKDSFRPKISATLKEIFPKKFFYIKKKKENLASSHYINVEEVDNFKITRQRASVFGRIKPSTTRPSVFQRMSMAT
TKEENQCFISISIQPSVFQRLSVSTSKKNHSSTSAFDCSEVIGDQFEKTMKTVKAKSFAKVNDDKKIHSIVHSRGLVPRGCVSRTISIYRRHPRKDGSREGYFTKLGGLV
PPGCVSRTISLYRRHPRKDGNREGYFTKLGGLVPRGYVSRTISLYRRHPRKDGSREGYFTKLGGLVPQGCVSWAISLYRRHPRKDGSH