; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g14500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionprotein SPIRRIG
Genome locationchr3:9771847..9786194
RNA-Seq ExpressionMoc03g14500
SyntenyMoc03g14500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]2.1e-1460Show/hide
Query:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ
        P+KGKGP +SETEESTNSAGSKLR+GGN++RRT+IFDS   QK KK+H+     G +S+ D +N+ PV LDK KP D+ E  EK+
Subjt:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ

XP_022155816.1 protein SPIRRIG [Momordica charantia]3.3e-2064.36Show/hide
Query:  STTRAMRGQRVTPHPRPQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEK
        STTR   G+ V     P+KGKGP+ESE+EESTNS GS+LRL  N KRRT+ FDS GQQKDKK+ +SPV  G KSN D+QNA P+DLDKDK  DR EL E+
Subjt:  STTRAMRGQRVTPHPRPQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEK

Query:  Q
        Q
Subjt:  Q

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.9e-1560Show/hide
Query:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ
        P+KGKGP ES+TEESTNS GSKLR+GGN+++RTRIFD    +K KK+H+SP   G KS+ D +N+ P+ LDK KP DR E  EK+
Subjt:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ

XP_023525925.1 uncharacterized protein LOC111789396 [Cucurbita pepo subsp. pepo]6.7e-0545.95Show/hide
Query:  FDVPTFPRTDAFGIIVPIPEHIFSK------------DLDIR-GTNCELVKIVNANEWAACGMLYFFTFEVDYV
        FDVPTFP T A G+IVPI E   SK              +IR GTN E VKIV AN+    G  Y+ TF+V  +
Subjt:  FDVPTFPRTDAFGIIVPIPEHIFSK------------DLDIR-GTNCELVKIVNANEWAACGMLYFFTFEVDYV

TrEMBL top hitse value%identityAlignment
A0A6J1CUA7 uncharacterized protein LOC1110146461.0e-1460Show/hide
Query:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ
        P+KGKGP +SETEESTNSAGSKLR+GGN++RRT+IFDS   QK KK+H+     G +S+ D +N+ PV LDK KP D+ E  EK+
Subjt:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ

A0A6J1DSV3 protein SPIRRIG1.6e-2064.36Show/hide
Query:  STTRAMRGQRVTPHPRPQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEK
        STTR   G+ V     P+KGKGP+ESE+EESTNS GS+LRL  N KRRT+ FDS GQQKDKK+ +SPV  G KSN D+QNA P+DLDKDK  DR EL E+
Subjt:  STTRAMRGQRVTPHPRPQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEK

Query:  Q
        Q
Subjt:  Q

A0A6J1DWY0 uncharacterized protein LOC1110252939.1e-1660Show/hide
Query:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ
        P+KGKGP ES+TEESTNS GSKLR+GGN+++RTRIFD    +K KK+H+SP   G KS+ D +N+ P+ LDK KP DR E  EK+
Subjt:  PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGCCGATGTGAGCTACTGTCAGCGGCGTGGTTATCGGGTATA
ACCGTCGGTCCCGAGATTATCGGGTCCGCCCAAGTATTCAGGTCGGTCCGGAGGCCGAGTTCGAGCTGCAATCTGAAATACACTGTTGTGCATATCCTTGCATAC
CTGAAGATTTCTATCATTCAAAATCATGTATTTGATACTTACTTAAAATGCACGGAGATCGTCAGAGTGCCAGCGAGCTTGGAAGAAACACCGATGTCGTTCGTC
GTGTTAGAGTGGGTCGCTGGACTCTTCGTCGTCGTCGGTCAATCACCGGAGGATGGTCTCAAGGCAGCAATGGAGGTCTGTTTTGATGTACCCACTTTTCCTCGT
ACCGATGCTTTTGGTATTATTGTTCCTATACCTGAACATATATTTTCAAAAGATCTTGATATTCGAGGTACAAATTGTGAACTTGTTAAAATTGTGAATGCAAAT
GAGTGGGCTGCATGTGGTATGTTGTATTTCTTCACCTTTGAGGTCGACTACGTATCAGAAGGAATTGAGGAAGCAGCTGACAGAGAACTGGACCAGACCGAGCAG
GGCTCGGGCTCCACTGTAGAAGGTTCTGGAACCATTCCCGCATCTATAAGTAAGCGAAGCAGTCTAACCCTAAGGGGTAGGTTTCAGTTCCCTGATCAACGAGTT
AGGAGGACCCGAGGGCGAAACAGGATTGAGTCGACAAAACGCAAAGCACCAAGAAGGACTGCCCGAGGTGCCTACGACAACAGCCCCTCAACAGCTCTAAAGTCA
GTTCGCGGCCTTAGAGAGAGAGGTGGAGAACATGCTTCAACGCATGACCCAACTACTTCAACAACTAGAGCCATGAGAGGCCAGCGAGTAACCCCTCATCCGAGA
CCCCAAAAGGGAAAAGGCCCGGTAGAGAGTGAGACTGAGGAGTCAACAAACAGTGCAGGGAGCAAATTGAGGCTAGGTGGCAATAGCAAACGACGAACTCGTATT
TTCGACTCCGGAGGCCAACAAAAGGACAAAAAGCGACACAGGTCTCCGGTACAATATGGGAGCAAAAGCAACAAAGATAGACAGAATGCGGGACCCGTAGACCTC
GACAAAGACAAGCCGGTGGATCGACATGAGTTGCCTGAGAAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGTATGAGGGCCGAGGTGAACCTGGCCGAGGTCCGACCTACCGGGAAGCTCGGTGGGGGCCGATGTGAGCTACTGTCAGCGGCGTGGTTATCGGGTATA
ACCGTCGGTCCCGAGATTATCGGGTCCGCCCAAGTATTCAGGTCGGTCCGGAGGCCGAGTTCGAGCTGCAATCTGAAATACACTGTTGTGCATATCCTTGCATAC
CTGAAGATTTCTATCATTCAAAATCATGTATTTGATACTTACTTAAAATGCACGGAGATCGTCAGAGTGCCAGCGAGCTTGGAAGAAACACCGATGTCGTTCGTC
GTGTTAGAGTGGGTCGCTGGACTCTTCGTCGTCGTCGGTCAATCACCGGAGGATGGTCTCAAGGCAGCAATGGAGGTCTGTTTTGATGTACCCACTTTTCCTCGT
ACCGATGCTTTTGGTATTATTGTTCCTATACCTGAACATATATTTTCAAAAGATCTTGATATTCGAGGTACAAATTGTGAACTTGTTAAAATTGTGAATGCAAAT
GAGTGGGCTGCATGTGGTATGTTGTATTTCTTCACCTTTGAGGTCGACTACGTATCAGAAGGAATTGAGGAAGCAGCTGACAGAGAACTGGACCAGACCGAGCAG
GGCTCGGGCTCCACTGTAGAAGGTTCTGGAACCATTCCCGCATCTATAAGTAAGCGAAGCAGTCTAACCCTAAGGGGTAGGTTTCAGTTCCCTGATCAACGAGTT
AGGAGGACCCGAGGGCGAAACAGGATTGAGTCGACAAAACGCAAAGCACCAAGAAGGACTGCCCGAGGTGCCTACGACAACAGCCCCTCAACAGCTCTAAAGTCA
GTTCGCGGCCTTAGAGAGAGAGGTGGAGAACATGCTTCAACGCATGACCCAACTACTTCAACAACTAGAGCCATGAGAGGCCAGCGAGTAACCCCTCATCCGAGA
CCCCAAAAGGGAAAAGGCCCGGTAGAGAGTGAGACTGAGGAGTCAACAAACAGTGCAGGGAGCAAATTGAGGCTAGGTGGCAATAGCAAACGACGAACTCGTATT
TTCGACTCCGGAGGCCAACAAAAGGACAAAAAGCGACACAGGTCTCCGGTACAATATGGGAGCAAAAGCAACAAAGATAGACAGAATGCGGGACCCGTAGACCTC
GACAAAGACAAGCCGGTGGATCGACATGAGTTGCCTGAGAAACAATAA
Protein sequenceShow/hide protein sequence
MLSMRAEVNLAEVRPTGKLGGGRCELLSAAWLSGITVGPEIIGSAQVFRSVRRPSSSCNLKYTVVHILAYLKISIIQNHVFDTYLKCTEIVRVPASLEETPMSFV
VLEWVAGLFVVVGQSPEDGLKAAMEVCFDVPTFPRTDAFGIIVPIPEHIFSKDLDIRGTNCELVKIVNANEWAACGMLYFFTFEVDYVSEGIEEAADRELDQTEQ
GSGSTVEGSGTIPASISKRSSLTLRGRFQFPDQRVRRTRGRNRIESTKRKAPRRTARGAYDNSPSTALKSVRGLRERGGEHASTHDPTTSTTRAMRGQRVTPHPR
PQKGKGPVESETEESTNSAGSKLRLGGNSKRRTRIFDSGGQQKDKKRHRSPVQYGSKSNKDRQNAGPVDLDKDKPVDRHELPEKQ