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Moc03g14730 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14730
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr3:9894074..9900005
RNA-Seq ExpressionMoc03g14730
SyntenyMoc03g14730
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79134.1 hypothetical protein VITISV_000843 [Vitis vinifera]1.4e-0660.38Show/hide
Query:  MDQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
        +DQS GKT G ARM+DGLYYF++   SNKI Q  SS SSL V+ QIM+W+  L
Subjt:  MDQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
CAN81492.1 hypothetical protein VITISV_019989 [Vitis vinifera]8.9e-0660Show/hide
Query:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSLIVY
        DQSLGKT G ARM++GLYYF++   SNKI Q  SS SSLSV+ QIM  Y    +Y
Subjt:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSLIVY
RVW39524.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]4.0e-0651.52Show/hide
Query:  LGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWY---FSLIVYMLKRRSPSSSV
        LGKT G ARM+ GLYYF++   SNKI Q  SS SSLSV+ QIM+W+    +LI  +L  R P  ++
Subjt:  LGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWY---FSLIVYMLKRRSPSSSV
RVW92973.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]4.0e-0661.54Show/hide
Query:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
        DQS GKT G ARM++GLYYF +   SNKI Q  SS SSLSV+ QIM+W+  L
Subjt:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
XP_022155160.1 squamous cell carcinoma antigen recognized by T-cells 3-like [Momordica charantia]1.4e-1182.98Show/hide
Query:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIML
        D+S GKT+GCARMLDGLYYFDE SGSNKITQCFSS S LSVK++IML
Subjt:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIML
TrEMBL top hitse value%identityAlignment
A0A438DVM2 Retrovirus-related Pol polyprotein from transposon RE11.9e-0651.52Show/hide
Query:  LGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWY---FSLIVYMLKRRSPSSSV
        LGKT G ARM+ GLYYF++   SNKI Q  SS SSLSV+ QIM+W+    +LI  +L  R P  ++
Subjt:  LGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWY---FSLIVYMLKRRSPSSSV
A0A438I8D6 Retrovirus-related Pol polyprotein from transposon RE11.9e-0661.54Show/hide
Query:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
        DQS GKT G ARM++GLYYF +   SNKI Q  SS SSLSV+ QIM+W+  L
Subjt:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
A0A6J1DLN0 squamous cell carcinoma antigen recognized by T-cells 3-like6.8e-1282.98Show/hide
Query:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIML
        D+S GKT+GCARMLDGLYYFDE SGSNKITQCFSS S LSVK++IML
Subjt:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIML
A5BNN1 Integrase catalytic domain-containing protein6.6e-0760.38Show/hide
Query:  MDQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
        +DQS GKT G ARM+DGLYYF++   SNKI Q  SS SSL V+ QIM+W+  L
Subjt:  MDQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSL
A5BUG2 Uncharacterized protein4.3e-0660Show/hide
Query:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSLIVY
        DQSLGKT G ARM++GLYYF++   SNKI Q  SS SSLSV+ QIM  Y    +Y
Subjt:  DQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSLIVY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACGAATGCTCTGATACCAAATGATAAGCGCCAAGGAGGCGCTTCACATTTGGATATGGACCAATCCTTGGGGAAGACGTATGGATGTGCTAGGATGCTT
GATGGCCTCTACTACTTTGACGAGCCTTCTGGTAGTAATAAAATAACTCAATGCTTCAGTAGTTATAGTTCTCTTTCTGTTAAACAACAAATTATGCTTTGGTAT
TTTAGCTTGATTGTCTACATGTTGAAGCGGAGATCTCCTTCTTCATCTGTTGGCCCTCATGGCATGATGAGGATGGACTTCTTTCCTCTTGGGCTTGGACGCGTT
GGGCCTCCATTGAGCCGCCCCCCCGGATTTCTCCTTCATCTTCCAACCCCGCCGCCCCCCTTCTCTTGTTTTCTGGCGAGGTGCAGCGGCTCCGGCGGCGCTTCT
TCGGATCAACCAGCAGCGGTGGCGGCGACCTTCGGATCGAGCAGCGGCGCTGCGGCGCTCCTTCGAACAGCAGCGGCGACGTCCCGATCAAGTGGCGGCGCGGCC
CCCTCCTCGCAGCGGCGCACGGCGGACTGTTACAGCGGCAGACCAGCGATGCGACTCCCCGATGTTCCGACGGTCTGCAGCAGCGGCGGCGCACCGCGACGATCT
GCAACGAACCAGTGCGGCCTCCTCCTCGCGGCGGCGCACGGCGGACGGGCGGTACAGCAGCGGAACGGCGGCGACTTGCTGCTACGACCCGACGAACAACAACTC
CAGCGACGGGATTTGTACGTTACAGCGGTGTTTAGGACGTTTGGCGGTGACCCACATCCGTTTGAAGCTCGATTTAGGCTACCCACACCTTGGCGAGTTAGATCT
AGGGTGAGGTCCACGCAAAACTTAAGGGCGAGGTTGTGGGGTCGATACGAGGAGTCCTTTGGAGGGAAAACTATTGGGGCCTTGGGTATAAATGGTCAAGGGCCA
ATAGATGGGAAGTCATCGGGGCCTCAGGTGAAGGACTCGTGGGCGACCATGGTGATGGGACGGAGGAGACATGACGAGCGAGGACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGACGAATGCTCTGATACCAAATGATAAGCGCCAAGGAGGCGCTTCACATTTGGATATGGACCAATCCTTGGGGAAGACGTATGGATGTGCTAGGATGCTT
GATGGCCTCTACTACTTTGACGAGCCTTCTGGTAGTAATAAAATAACTCAATGCTTCAGTAGTTATAGTTCTCTTTCTGTTAAACAACAAATTATGCTTTGGTAT
TTTAGCTTGATTGTCTACATGTTGAAGCGGAGATCTCCTTCTTCATCTGTTGGCCCTCATGGCATGATGAGGATGGACTTCTTTCCTCTTGGGCTTGGACGCGTT
GGGCCTCCATTGAGCCGCCCCCCCGGATTTCTCCTTCATCTTCCAACCCCGCCGCCCCCCTTCTCTTGTTTTCTGGCGAGGTGCAGCGGCTCCGGCGGCGCTTCT
TCGGATCAACCAGCAGCGGTGGCGGCGACCTTCGGATCGAGCAGCGGCGCTGCGGCGCTCCTTCGAACAGCAGCGGCGACGTCCCGATCAAGTGGCGGCGCGGCC
CCCTCCTCGCAGCGGCGCACGGCGGACTGTTACAGCGGCAGACCAGCGATGCGACTCCCCGATGTTCCGACGGTCTGCAGCAGCGGCGGCGCACCGCGACGATCT
GCAACGAACCAGTGCGGCCTCCTCCTCGCGGCGGCGCACGGCGGACGGGCGGTACAGCAGCGGAACGGCGGCGACTTGCTGCTACGACCCGACGAACAACAACTC
CAGCGACGGGATTTGTACGTTACAGCGGTGTTTAGGACGTTTGGCGGTGACCCACATCCGTTTGAAGCTCGATTTAGGCTACCCACACCTTGGCGAGTTAGATCT
AGGGTGAGGTCCACGCAAAACTTAAGGGCGAGGTTGTGGGGTCGATACGAGGAGTCCTTTGGAGGGAAAACTATTGGGGCCTTGGGTATAAATGGTCAAGGGCCA
ATAGATGGGAAGTCATCGGGGCCTCAGGTGAAGGACTCGTGGGCGACCATGGTGATGGGACGGAGGAGACATGACGAGCGAGGACCATAG
Protein sequenceShow/hide protein sequence
MSTNALIPNDKRQGGASHLDMDQSLGKTYGCARMLDGLYYFDEPSGSNKITQCFSSYSSLSVKQQIMLWYFSLIVYMLKRRSPSSSVGPHGMMRMDFFPLGLGRV
GPPLSRPPGFLLHLPTPPPPFSCFLARCSGSGGASSDQPAAVAATFGSSSGAAALLRTAAATSRSSGGAAPSSQRRTADCYSGRPAMRLPDVPTVCSSGGAPRRS
ATNQCGLLLAAAHGGRAVQQRNGGDLLLRPDEQQLQRRDLYVTAVFRTFGGDPHPFEARFRLPTPWRVRSRVRSTQNLRARLWGRYEESFGGKTIGALGINGQGP
IDGKSSGPQVKDSWATMVMGRRRHDERGP