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Moc03g14780 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14780
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:9952188..9953653
RNA-Seq ExpressionMoc03g14780
SyntenyMoc03g14780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017221509.1 PREDICTED: uncharacterized protein LOC108198257 [Daucus carota subsp. sativus]1.4e-0850.77Show/hide
Query:  FEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY
        F+V  LVLRKV+LN ++ L  +   NWEG YRV  I+  GT  LEDL  KP+   WN EH + YY
Subjt:  FEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY

XP_017227881.1 PREDICTED: uncharacterized protein LOC108203457 [Daucus carota subsp. sativus]4.8e-0953.85Show/hide
Query:  FEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY
        F+V  LVLRKV+LN K+ L  V   NWEG YRV  I+  GT  L DLG KP+   WN EH + YY
Subjt:  FEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY

XP_017239225.1 PREDICTED: uncharacterized protein LOC108212003 [Daucus carota subsp. sativus]1.1e-0852.31Show/hide
Query:  FEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY
        F+V  LVLRKV+LN ++ L  V   NWEG YRV  I+  GT  LEDL  KP+   WN EH + YY
Subjt:  FEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY

XP_020412910.1 uncharacterized protein LOC109947372 [Prunus persica]2.4e-0847.06Show/hide
Query:  HNRFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY
        H  F V   V+RKV L TKD  +  L P+WEG Y + GI+  GT  L D   K L H WNVEH + Y+
Subjt:  HNRFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY

XP_020420378.1 uncharacterized protein LOC109949361 [Prunus persica]1.4e-0845.59Show/hide
Query:  HNRFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY
        H  F +   V+RKV L TKD  +  L P+WEG Y + GI+  GT  L D   K L+H WNVEH + Y+
Subjt:  HNRFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYY

TrEMBL top hitse value%identityAlignment
A0A2N9FVV8 Ribonuclease H5.1e-0952.24Show/hide
Query:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP
        +FEV  LVLRKV L T+D  +  L PNWEG Y+V  I   GT  LE +  + L H WNVEH + YYP
Subjt:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP

A0A2N9G6T0 RNase H domain-containing protein8.7e-0952.24Show/hide
Query:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP
        +FEV  LVLRKV L TKD     L PNWE  Y+V  I   GT  LE +G + L H WN+EH + YYP
Subjt:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP

A0A2N9GNN7 Integrase catalytic domain-containing protein3.9e-0953.73Show/hide
Query:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP
        +FEV  LVLRKV L T+D  +  L PNWEG YRV  I   GT  LE +  + L H WNVEH + YYP
Subjt:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP

A0A2N9I7F1 Ribonuclease H6.7e-0950.75Show/hide
Query:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP
        RFEV  L+LRKV L T+D     L PNWEG Y+V  I   GT  LE +  + L H WN+EH + YYP
Subjt:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP

A0A2N9J642 Ribonuclease H6.7e-0953.73Show/hide
Query:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP
        +FEV  LVLRKV L T+D  +  L PNWEG YRV  I   GT  LE +  + L H WNVEH + YYP
Subjt:  RFEVVALVLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGGGCTCTGCTGAACTCTTTTGACACAAGCGTGGTTGAACAGGTCCCTCATTCTCATAACACTAATGCTAACACCCTCGCTCGCTTAACATCGTCTTAC
GAGACAGACTTGCCACGGGTAGTGATGGTAGAAAGTTTGAACGACTCAAGCCTCACTGAGCCCGAGGTTACGGACGTCGACCAGCCGAATGTGGGGGACTGGAAG
ATCGTTAAAGACCGAAAACTACCTGGCAACCGAGTAGACAACAACCAGCTCCAAAAAACGAGCGGCCTACTACCTACTCATAATCGGTTCGAGGTCGTAGCTTTG
GTGCTTAGGAAGGTGATGCTGAACACAAAGGACCGGTTAGACGAAGTGCTCAACCCTAATTGGGAGGGCCTCTATCGAGTGACCGGCATCATCTGCCTTGGAACC
TCCACGCTGGAAGATCTTGGAGACAAGCCTCTCGAACACCTGTGGAACGTGGAACACTTCCGCATATATTATCCCTACAAGAGCTGGGTGCCACCTAGTATATTA
TACCGCACCAGCGTCGACTTCTTTGTTGCAGGACACGTGGCTGCTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTACGGGCTCTGCTGAACTCTTTTGACACAAGCGTGGTTGAACAGGTCCCTCATTCTCATAACACTAATGCTAACACCCTCGCTCGCTTAACATCGTCTTAC
GAGACAGACTTGCCACGGGTAGTGATGGTAGAAAGTTTGAACGACTCAAGCCTCACTGAGCCCGAGGTTACGGACGTCGACCAGCCGAATGTGGGGGACTGGAAG
ATCGTTAAAGACCGAAAACTACCTGGCAACCGAGTAGACAACAACCAGCTCCAAAAAACGAGCGGCCTACTACCTACTCATAATCGGTTCGAGGTCGTAGCTTTG
GTGCTTAGGAAGGTGATGCTGAACACAAAGGACCGGTTAGACGAAGTGCTCAACCCTAATTGGGAGGGCCTCTATCGAGTGACCGGCATCATCTGCCTTGGAACC
TCCACGCTGGAAGATCTTGGAGACAAGCCTCTCGAACACCTGTGGAACGTGGAACACTTCCGCATATATTATCCCTACAAGAGCTGGGTGCCACCTAGTATATTA
TACCGCACCAGCGTCGACTTCTTTGTTGCAGGACACGTGGCTGCTTCCTAG
Protein sequenceShow/hide protein sequence
MVRALLNSFDTSVVEQVPHSHNTNANTLARLTSSYETDLPRVVMVESLNDSSLTEPEVTDVDQPNVGDWKIVKDRKLPGNRVDNNQLQKTSGLLPTHNRFEVVAL
VLRKVMLNTKDRLDEVLNPNWEGLYRVTGIICLGTSTLEDLGDKPLEHLWNVEHFRIYYPYKSWVPPSILYRTSVDFFVAGHVAAS