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Moc03g14910 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g14910
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationchr3:10033994..10042527
RNA-Seq ExpressionMoc03g14910
SyntenyMoc03g14910
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.3e-7146.02Show/hide
Query:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        MAN+G EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGGD HVG GLDRGRGR
Subjt:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQRAPRANAQ------------------------------------------------------------------------------------
        GRGYHNFQRAPRANAQ                                                                                    
Subjt:  GRGYHNFQRAPRANAQ------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------SADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG
                      SADSKLRNREAYEKPKEKFEKGESSKK KEKV E NVRN +IKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKED        
Subjt:  --------------SADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG

Query:  VCESEEYSEEDPTHM
            EEYSEEDPTHM
Subjt:  VCESEEYSEEDPTHM

XP_022158803.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025268 [Momordica charantia]1.2e-3279.25Show/hide
Query:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE
        + +++SADSKLRNREAY KPKEKFEKGESSKKGKEK+  PNVRNRDIKCWK QGVGHYSRDCPNRRTMIIREGEFVTEDEKED            EEYSE
Subjt:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE

Query:  EDPTHM
        EDPTHM
Subjt:  EDPTHM

XP_022971169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111469948, partial [Cucurbita maxima]9.5e-3035.44Show/hide
Query:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWED--------------------------
        M N  +  +I+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED                          
Subjt:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWED--------------------------

Query:  --------------DQATVLAGPRGGDR-----------------------------------------------------HVGRGLDR------GRGRG
                      D A  L   + G +                                                     H+   ++R       R   
Subjt:  --------------DQATVLAGPRGGDR-----------------------------------------------------HVGRGLDR------GRGRG

Query:  RGYHNFQRAPRANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDN
        + + N     +  +++ D K RN+E  EKP+ KFEK ESS+ GKEKV++ NVRNRD+KC +CQGVGHYSRDCPN R M I++GE VT+DE  D++ E+ +
Subjt:  RGYHNFQRAPRANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDN

Query:  GVCESEEYSEEDPTHM
           ESEE+SEEDPTH+
Subjt:  GVCESEEYSEEDPTHM

XP_023520282.1 uncharacterized protein LOC111783592 [Cucurbita pepo subsp. pepo]5.2e-2829.88Show/hide
Query:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR--------------------------------------------------------------------------------AP---------
        GR YHN Q+                                                                                AP         
Subjt:  GRGYHNFQR--------------------------------------------------------------------------------AP---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG
                 + ++++ D K RN+E  EKP+ KFEKGESS+ GKEKV++ NVRNRD+KCW+CQGVGHYSRDCPN R M I+EGE VT+DE  D++ E+ + 
Subjt:  ---------RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG

Query:  VCESEEYSEEDPTHM
          ESEE+SEEDPTH+
Subjt:  VCESEEYSEEDPTHM

XP_023520835.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo]1.5e-2729.88Show/hide
Query:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        M N  D  NI+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED+              VG GL RGR  
Subjt:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQR--------------------------------------------------------------------------------AP---------
        GR YHN Q+                                                                                AP         
Subjt:  GRGYHNFQR--------------------------------------------------------------------------------AP---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG
                 + ++++ D K RN E  EKP+ KFEKGESS+ GKEKV++ NVRNRD+KCW+CQGVGHYSRDCPN R M I+EGE VT+DE  D++ E+ + 
Subjt:  ---------RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG

Query:  VCESEEYSEEDPTHM
          ESEE+SEEDPTH+
Subjt:  VCESEEYSEEDPTHM

TrEMBL top hitse value%identityAlignment
A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241156.3e-7246.02Show/hide
Query:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR
        MAN+G EGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQA+ RVPPPP  RVMDEDEYEGDGSDHWEDDQATVLA PRGGD HVG GLDRGRGR
Subjt:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWEDDQATVLAGPRGGDRHVGRGLDRGRGR

Query:  GRGYHNFQRAPRANAQ------------------------------------------------------------------------------------
        GRGYHNFQRAPRANAQ                                                                                    
Subjt:  GRGYHNFQRAPRANAQ------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------SADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG
                      SADSKLRNREAYEKPKEKFEKGESSKK KEKV E NVRN +IKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKED        
Subjt:  --------------SADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNG

Query:  VCESEEYSEEDPTHM
            EEYSEEDPTHM
Subjt:  VCESEEYSEEDPTHM

A0A6J1DX46 LOW QUALITY PROTEIN: uncharacterized protein LOC1110252685.8e-3379.25Show/hide
Query:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE
        + +++SADSKLRNREAY KPKEKFEKGESSKKGKEK+  PNVRNRDIKCWK QGVGHYSRDCPNRRTMIIREGEFVTEDEKED            EEYSE
Subjt:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE

Query:  EDPTHM
        EDPTHM
Subjt:  EDPTHM

A0A6J1EQJ1 uncharacterized protein LOC1114365306.2e-2762.26Show/hide
Query:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE
        + ++++ D K RN+E  EKP+ KFEKGESS+ GKEKV++ NVRNRD+KCW+CQGVGHYSRDCPN R M I+EGE VT+DE  D++ E+ +   ESEE+SE
Subjt:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE

Query:  EDPTHM
        EDPTH+
Subjt:  EDPTHM

A0A6J1G2Q3 uncharacterized protein LOC1114502862.8e-2763.21Show/hide
Query:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE
        + +++S D K RN+E  EKP+ KFEKGESS+ GKEKV++ NVRNRD+KCW+CQGVGHYSRDCPN R M I+EGE VT+DE  D++ E+ +   ESEE+SE
Subjt:  RANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSE

Query:  EDPTHM
        EDPTH+
Subjt:  EDPTHM

A0A6J1I7T3 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699484.6e-3035.44Show/hide
Query:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWED--------------------------
        M N  +  +I+DAR REA + T+ER+IR +E LT+RIGRLE QNQA++R+P P P      D YEGD SDH ED                          
Subjt:  MANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDHWED--------------------------

Query:  --------------DQATVLAGPRGGDR-----------------------------------------------------HVGRGLDR------GRGRG
                      D A  L   + G +                                                     H+   ++R       R   
Subjt:  --------------DQATVLAGPRGGDR-----------------------------------------------------HVGRGLDR------GRGRG

Query:  RGYHNFQRAPRANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDN
        + + N     +  +++ D K RN+E  EKP+ KFEK ESS+ GKEKV++ NVRNRD+KC +CQGVGHYSRDCPN R M I++GE VT+DE  D++ E+ +
Subjt:  RGYHNFQRAPRANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNRRTMIIREGEFVTEDEKEDEVEEDDN

Query:  GVCESEEYSEEDPTHM
           ESEE+SEEDPTH+
Subjt:  GVCESEEYSEEDPTHM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATAAGCTCGGCACTTCAAAACTGAGTTCGAAAAGCCTCGAGCTTGTTGCTCCTACGCCGAAAAGGAATGGAAGCCGCCGCTGTCGCCAGAAGGCATCG
GGTCTGCTCGTGGAGGGCCGCTCGTCTTGGAGAAACGCCGCAAATTGTCGTTGGCCGAGGCTTCCAGTCGCCGTGCAGGTGGGAGAGCACGCCAGCCGCTGTAGA
GGGAAGAAATCGCCGGAATCTGCAGCAGATCAGTGGATGGTGCCGCCGTGGGACGCCGGGAATCGCGAAGACGCCGTCGTTGATGTCGAGGAAACGCCCGTGGTC
TCGCCGGAGGTAATCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATG
GCTAATATTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGG
ATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCCACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCAT
TGGGAGGACGATCAGGCTACAGTTTTAGCGGGTCCAAGAGGGGGTGATAGACACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAAT
TTCCAAAGAGCCCCACGAGCGAATGCTCAAAGTGCTGATTCTAAACTTAGAAATCGAGAGGCATATGAGAAACCAAAAGAAAAGTTTGAGAAAGGAGAGAGTTCC
AAGAAGGGGAAAGAGAAAGTTGATGAACCTAATGTGAGGAATCGGGATATTAAATGCTGGAAATGTCAAGGAGTAGGACATTACAGTCGAGACTGCCCTAATAGA
AGAACTATGATAATTAGAGAAGGAGAGTTTGTAACAGAAGATGAGAAGGAAGATGAGGTAGAAGAGGACGACAATGGTGTATGTGAGAGTGAGGAGTATAGTGAA
GAGGACCCTACACATATGTATTTTCTTTTGGAGAAGTTATTTGCCTTTTGTGTTGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATAAGCTCGGCACTTCAAAACTGAGTTCGAAAAGCCTCGAGCTTGTTGCTCCTACGCCGAAAAGGAATGGAAGCCGCCGCTGTCGCCAGAAGGCATCG
GGTCTGCTCGTGGAGGGCCGCTCGTCTTGGAGAAACGCCGCAAATTGTCGTTGGCCGAGGCTTCCAGTCGCCGTGCAGGTGGGAGAGCACGCCAGCCGCTGTAGA
GGGAAGAAATCGCCGGAATCTGCAGCAGATCAGTGGATGGTGCCGCCGTGGGACGCCGGGAATCGCGAAGACGCCGTCGTTGATGTCGAGGAAACGCCCGTGGTC
TCGCCGGAGGTAATCCGTTCTAAAACTTTTCCTTGGGTTGATTCCATACTTGTTTTCGGGGTTTTTGGGATTGAGTTCTATGGGTCTTGTTCGTTAGCAAGCATG
GCTAATATTGGAGATGAAGGCAATATTTCTGATGCCCGGAGGAGAGAGGCGCTAGAAGGAACTGTTGAACGAATGATTCGTAGCATGGAGGCATTGACAGAACGG
ATAGGAAGGTTGGAGACTCAAAACCAAGCTCAGGAGAGAGTTCCACCACCTCCACCACCACGTGTTATGGATGAGGATGAGTATGAAGGTGATGGATCCGATCAT
TGGGAGGACGATCAGGCTACAGTTTTAGCGGGTCCAAGAGGGGGTGATAGACACGTTGGTCGTGGCTTAGATCGAGGGAGAGGCCGGGGAAGAGGCTATCATAAT
TTCCAAAGAGCCCCACGAGCGAATGCTCAAAGTGCTGATTCTAAACTTAGAAATCGAGAGGCATATGAGAAACCAAAAGAAAAGTTTGAGAAAGGAGAGAGTTCC
AAGAAGGGGAAAGAGAAAGTTGATGAACCTAATGTGAGGAATCGGGATATTAAATGCTGGAAATGTCAAGGAGTAGGACATTACAGTCGAGACTGCCCTAATAGA
AGAACTATGATAATTAGAGAAGGAGAGTTTGTAACAGAAGATGAGAAGGAAGATGAGGTAGAAGAGGACGACAATGGTGTATGTGAGAGTGAGGAGTATAGTGAA
GAGGACCCTACACATATGTATTTTCTTTTGGAGAAGTTATTTGCCTTTTGTGTTGAGTTTTAG
Protein sequenceShow/hide protein sequence
MSNKLGTSKLSSKSLELVAPTPKRNGSRRCRQKASGLLVEGRSSWRNAANCRWPRLPVAVQVGEHASRCRGKKSPESAADQWMVPPWDAGNREDAVVDVEETPVV
SPEVIRSKTFPWVDSILVFGVFGIEFYGSCSLASMANIGDEGNISDARRREALEGTVERMIRSMEALTERIGRLETQNQAQERVPPPPPPRVMDEDEYEGDGSDH
WEDDQATVLAGPRGGDRHVGRGLDRGRGRGRGYHNFQRAPRANAQSADSKLRNREAYEKPKEKFEKGESSKKGKEKVDEPNVRNRDIKCWKCQGVGHYSRDCPNR
RTMIIREGEFVTEDEKEDEVEEDDNGVCESEEYSEEDPTHMYFLLEKLFAFCVEF