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Moc03g15030 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g15030
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:10120074..10126191
RNA-Seq ExpressionMoc03g15030
SyntenyMoc03g15030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]2.6e-0666.67Show/hide
Query:  MKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL
        MKEK+PPKFKLP IK+Y+ S DP DH+D Y EW +IYG+
Subjt:  MKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.5e-0661.9Show/hide
Query:  DDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL
        ++IMK K+PPKFKLP +KQ++ + D  DH+DAYREWM+IYG+
Subjt:  DDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.3e-1339.02Show/hide
Query:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHIPWTDRTYSTLVEVRS-KPPCLSDQVDLMEDFVQAPAS
        +++QADSPFT++IM+EK+PPKFKLP +KQ++ + DP DH+DAYREWM+IYG+   S+  R  +  T    S  +  R  K   +S    L   FV     
Subjt:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHIPWTDRTYSTLVEVRS-KPPCLSDQVDLMEDFVQAPAS

Query:  SHLRSSSQLNFLVVQTTVERTFR
           RS      L ++     + R
Subjt:  SHLRSSSQLNFLVVQTTVERTFR

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]9.1e-1255.56Show/hide
Query:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHI
        ++ QADSPFT++IM+EK+PPKFKLP +K ++   +P DH+DAYREWM+IYG+   SD  R  +
Subjt:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHI

XP_030950134.1 uncharacterized protein LOC115974049 [Quercus lobata]1.7e-0526.23Show/hide
Query:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHIPWTDRTYSTLVEVRSKPPCLSDQVDLMEDFVQAPASS
        +V Q DSPFT  +    +PPKF++P ++ Y+ +KDP DH+++++  M++ G+  P+++     P T +  + +   R  P  +S   +L   F       
Subjt:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHIPWTDRTYSTLVEVRSKPPCLSDQVDLMEDFVQAPASS

Query:  HLRSSSQLNFLVVQTTVERTFR
        H    S    + ++   + T R
Subjt:  HLRSSSQLNFLVVQTTVERTFR

TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166191.2e-0666.67Show/hide
Query:  MKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL
        MKEK+PPKFKLP IK+Y+ S DP DH+D Y EW +IYG+
Subjt:  MKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL

A0A6J1D7D2 uncharacterized protein LOC1110183077.3e-0761.9Show/hide
Query:  DDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL
        ++IMK K+PPKFKLP +KQ++ + D  DH+DAYREWM+IYG+
Subjt:  DDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL

A0A6J1DWY0 uncharacterized protein LOC1110252936.1e-1439.02Show/hide
Query:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHIPWTDRTYSTLVEVRS-KPPCLSDQVDLMEDFVQAPAS
        +++QADSPFT++IM+EK+PPKFKLP +KQ++ + DP DH+DAYREWM+IYG+   S+  R  +  T    S  +  R  K   +S    L   FV     
Subjt:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHIPWTDRTYSTLVEVRS-KPPCLSDQVDLMEDFVQAPAS

Query:  SHLRSSSQLNFLVVQTTVERTFR
           RS      L ++     + R
Subjt:  SHLRSSSQLNFLVVQTTVERTFR

A0A6J1DZ49 uncharacterized protein LOC1110248518.9e-0564.1Show/hide
Query:  MKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL
        MKEK  PKFKLP I +Y+ S DP DH+DAYREW +IY +
Subjt:  MKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGL

A0A6J1E1E7 uncharacterized protein LOC1110255484.4e-1255.56Show/hide
Query:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHI
        ++ QADSPFT++IM+EK+PPKFKLP +K ++   +P DH+DAYREWM+IYG+   SD  R  +
Subjt:  MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAGCAAGCTGATTCTCCATTTACTGATGACATCATGAAGGAGAAGATACCTCCAAAGTTCAAGCTACCCAACATCAAACAATACAACTACTCGAAAGAC
CCAACGGACCACGTGGATGCGTATCGTGAATGGATGAATATTTATGGGTTAGAGACGCCATCAGATGTTTATCGTTCTCATATACCTTGGACGGATCGAACTTAC
TCGACTCTAGTAGAGGTAAGGTCAAAGCCGCCATGCTTAAGCGATCAAGTCGACCTCATGGAGGACTTTGTCCAGGCTCCTGCATCCTCACATCTACGCTCATCA
AGCCAACTTAATTTTTTGGTAGTTCAAACTACGGTTGAGCGGACATTTCGACAAGGCAAAATCGACAACACCTTAAATAGACATAGTCGAGTAGACCTCTTTGAT
GCCTCGATCCCACATGAGGTCCGCCCCAATAAGCCTGTGACAATGAAGAACAATATTGGTGCAAAACTTAAGAGACCTTATCCATTTCTGGAGTTCACCCTGATT
TTGATTCCATACATCAAACCCTCCGTAGGGGTGGTCGCTTTAGGGCGGCACGCAGGCCGTATACTTTCTCCATTCACCTTGGTATTGAACCATGCAAACACCTTC
CGTAATGAGGCCACGCTCAAGGCGCCCACACCCAGCACCTCGGGTTGCTCCCGGGTTGTGGCAGCAAACGAGCGGTGCCTAGGCAGCGATCAGGCGCTAGGTGCA
GCTCCTAAGCGTTGTCTTCTCAAGTTGCACGGACAGCTCCGATTTTCGCTTCATTTTTCTGGTACTCTTTCACATAAACTCCTTGCCATGAATGACACGAACGTA
CAGACTCGATTTTTAGAATTAAACGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAGCAAGCTGATTCTCCATTTACTGATGACATCATGAAGGAGAAGATACCTCCAAAGTTCAAGCTACCCAACATCAAACAATACAACTACTCGAAAGAC
CCAACGGACCACGTGGATGCGTATCGTGAATGGATGAATATTTATGGGTTAGAGACGCCATCAGATGTTTATCGTTCTCATATACCTTGGACGGATCGAACTTAC
TCGACTCTAGTAGAGGTAAGGTCAAAGCCGCCATGCTTAAGCGATCAAGTCGACCTCATGGAGGACTTTGTCCAGGCTCCTGCATCCTCACATCTACGCTCATCA
AGCCAACTTAATTTTTTGGTAGTTCAAACTACGGTTGAGCGGACATTTCGACAAGGCAAAATCGACAACACCTTAAATAGACATAGTCGAGTAGACCTCTTTGAT
GCCTCGATCCCACATGAGGTCCGCCCCAATAAGCCTGTGACAATGAAGAACAATATTGGTGCAAAACTTAAGAGACCTTATCCATTTCTGGAGTTCACCCTGATT
TTGATTCCATACATCAAACCCTCCGTAGGGGTGGTCGCTTTAGGGCGGCACGCAGGCCGTATACTTTCTCCATTCACCTTGGTATTGAACCATGCAAACACCTTC
CGTAATGAGGCCACGCTCAAGGCGCCCACACCCAGCACCTCGGGTTGCTCCCGGGTTGTGGCAGCAAACGAGCGGTGCCTAGGCAGCGATCAGGCGCTAGGTGCA
GCTCCTAAGCGTTGTCTTCTCAAGTTGCACGGACAGCTCCGATTTTCGCTTCATTTTTCTGGTACTCTTTCACATAAACTCCTTGCCATGAATGACACGAACGTA
CAGACTCGATTTTTAGAATTAAACGCCTAA
Protein sequenceShow/hide protein sequence
MVEQADSPFTDDIMKEKIPPKFKLPNIKQYNYSKDPTDHVDAYREWMNIYGLETPSDVYRSHIPWTDRTYSTLVEVRSKPPCLSDQVDLMEDFVQAPASSHLRSS
SQLNFLVVQTTVERTFRQGKIDNTLNRHSRVDLFDASIPHEVRPNKPVTMKNNIGAKLKRPYPFLEFTLILIPYIKPSVGVVALGRHAGRILSPFTLVLNHANTF
RNEATLKAPTPSTSGCSRVVAANERCLGSDQALGAAPKRCLLKLHGQLRFSLHFSGTLSHKLLAMNDTNVQTRFLELNA