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Moc03g15050 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g15050
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:10154738..10155340
RNA-Seq ExpressionMoc03g15050
SyntenyMoc03g15050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142768.1 uncharacterized protein LOC111012806 [Momordica charantia]2.7e-0791.67Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQAR
        MVQPA+SANTTERRGLNADNGPQRDLDAR VEDQ R
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQAR

XP_022150385.1 uncharacterized protein LOC111018561 [Momordica charantia]3.2e-0871.93Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQ-ARAGQE-GDLPRRSARHANQEL
        MVQPA SANTTERRGLNADNGPQRDLDARMVEDQ  RA +E  D P  S   +N +L
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQ-ARAGQE-GDLPRRSARHANQEL

XP_022154406.1 uncharacterized protein LOC111021683 [Momordica charantia]2.1e-0748.39Show/hide
Query:  MEEMYAEATRANRTASPSRVPGAPREKEGRVPSLHPGDREPIPNNRGWIIACGTTILESTSLIRRREHL-ESRKTLPPTPESSPTLTSRLNQS
        ME+MYAEATRANRTASPS  PGAP EK    PS+ PGDREPIPN+ G   +     L    +   R+HL E +K     PE S + + + + S
Subjt:  MEEMYAEATRANRTASPSRVPGAPREKEGRVPSLHPGDREPIPNNRGWIIACGTTILESTSLIRRREHL-ESRKTLPPTPESSPTLTSRLNQS

XP_022156638.1 uncharacterized protein LOC111023488 [Momordica charantia]2.0e-1354.65Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADP
        MVQP  SANT ERR LN +N  Q +LDA++ E+Q +AGQE D PRRS R+AN  LPP HP+  KANRGRGG +       D    P
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADP

XP_022159327.1 uncharacterized protein LOC111025738 [Momordica charantia]1.1e-1343.94Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADPEALSTLQRELDDMR
        MVQP  S NT +RR L A++G QR++ A +VE Q   G   +   RSAR    +L P HPKP KANRGRGG SR+ +  A      E    LQ+E++ MR
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADPEALSTLQRELDDMR

Query:  HRLCTMEEMYAEATRANRTASPSRVPGAPREK
         ++ TMEEMY E  +A    S S    A  E+
Subjt:  HRLCTMEEMYAEATRANRTASPSRVPGAPREK

TrEMBL top hitse value%identityAlignment
A0A6J1CP40 uncharacterized protein LOC1110128061.3e-0791.67Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQAR
        MVQPA+SANTTERRGLNADNGPQRDLDAR VEDQ R
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQAR

A0A6J1D8C0 uncharacterized protein LOC1110185611.6e-0871.93Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQ-ARAGQE-GDLPRRSARHANQEL
        MVQPA SANTTERRGLNADNGPQRDLDARMVEDQ  RA +E  D P  S   +N +L
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQ-ARAGQE-GDLPRRSARHANQEL

A0A6J1DNM4 Ribonuclease H1.0e-0748.39Show/hide
Query:  MEEMYAEATRANRTASPSRVPGAPREKEGRVPSLHPGDREPIPNNRGWIIACGTTILESTSLIRRREHL-ESRKTLPPTPESSPTLTSRLNQS
        ME+MYAEATRANRTASPS  PGAP EK    PS+ PGDREPIPN+ G   +     L    +   R+HL E +K     PE S + + + + S
Subjt:  MEEMYAEATRANRTASPSRVPGAPREKEGRVPSLHPGDREPIPNNRGWIIACGTTILESTSLIRRREHL-ESRKTLPPTPESSPTLTSRLNQS

A0A6J1DR60 uncharacterized protein LOC1110234889.5e-1454.65Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADP
        MVQP  SANT ERR LN +N  Q +LDA++ E+Q +AGQE D PRRS R+AN  LPP HP+  KANRGRGG +       D    P
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADP

A0A6J1DZJ1 uncharacterized protein LOC1110257385.5e-1443.94Show/hide
Query:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADPEALSTLQRELDDMR
        MVQP  S NT +RR L A++G QR++ A +VE Q   G   +   RSAR    +L P HPKP KANRGRGG SR+ +  A      E    LQ+E++ MR
Subjt:  MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADPEALSTLQRELDDMR

Query:  HRLCTMEEMYAEATRANRTASPSRVPGAPREK
         ++ TMEEMY E  +A    S S    A  E+
Subjt:  HRLCTMEEMYAEATRANRTASPSRVPGAPREK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGCCAGCAAGCTCTGCTAATACGACAGAACGGAGGGGTTTGAACGCTGATAACGGCCCTCAGCGAGATCTTGACGCTAGAATGGTCGAGGACCAGGCT
CGAGCAGGGCAAGAGGGAGATCTTCCACGGAGATCTGCCCGCCATGCGAACCAGGAGTTACCTCCTGTTCACCCTAAACCCTCAAAAGCCAACCGAGGCCGAGGA
GGGACCTCAAGAAAGGCTTCCCGGAGAGCCGACTCGACGGCAGACCCTGAGGCTTTGTCTACTCTCCAGCGCGAGTTGGATGATATGCGCCATCGGTTGTGCACG
ATGGAAGAAATGTACGCCGAGGCAACGCGGGCTAACCGAACAGCGTCTCCCTCCAGGGTCCCAGGCGCACCTAGAGAGAAGGAAGGTCGGGTTCCATCTCTCCAT
CCTGGCGACCGCGAGCCCATTCCCAACAATAGAGGGTGGATTATAGCTTGCGGGACAACGATCTTAGAAAGCACCTCACTGATAAGAAGAAGAGAGCATCTCGAG
AGCCGGAAGACTCTCCCTCCTACTCCCGAGAGTTCTCCAACTCTGACTTCAAGGCTCAATCAAAGTATAAGCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGCCAGCAAGCTCTGCTAATACGACAGAACGGAGGGGTTTGAACGCTGATAACGGCCCTCAGCGAGATCTTGACGCTAGAATGGTCGAGGACCAGGCT
CGAGCAGGGCAAGAGGGAGATCTTCCACGGAGATCTGCCCGCCATGCGAACCAGGAGTTACCTCCTGTTCACCCTAAACCCTCAAAAGCCAACCGAGGCCGAGGA
GGGACCTCAAGAAAGGCTTCCCGGAGAGCCGACTCGACGGCAGACCCTGAGGCTTTGTCTACTCTCCAGCGCGAGTTGGATGATATGCGCCATCGGTTGTGCACG
ATGGAAGAAATGTACGCCGAGGCAACGCGGGCTAACCGAACAGCGTCTCCCTCCAGGGTCCCAGGCGCACCTAGAGAGAAGGAAGGTCGGGTTCCATCTCTCCAT
CCTGGCGACCGCGAGCCCATTCCCAACAATAGAGGGTGGATTATAGCTTGCGGGACAACGATCTTAGAAAGCACCTCACTGATAAGAAGAAGAGAGCATCTCGAG
AGCCGGAAGACTCTCCCTCCTACTCCCGAGAGTTCTCCAACTCTGACTTCAAGGCTCAATCAAAGTATAAGCCTCTAA
Protein sequenceShow/hide protein sequence
MVQPASSANTTERRGLNADNGPQRDLDARMVEDQARAGQEGDLPRRSARHANQELPPVHPKPSKANRGRGGTSRKASRRADSTADPEALSTLQRELDDMRHRLCT
MEEMYAEATRANRTASPSRVPGAPREKEGRVPSLHPGDREPIPNNRGWIIACGTTILESTSLIRRREHLESRKTLPPTPESSPTLTSRLNQSISL