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Moc03g15060 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g15060
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionGag/pol protein
Genome locationchr3:10162941..10163330
RNA-Seq ExpressionMoc03g15060
SyntenyMoc03g15060
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032020.1 gag/pol protein [Cucumis melo var. makuwa]1.7e-2671.07Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSGSK +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

KAA0061339.1 gag/pol protein [Cucumis melo var. makuwa]3.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein1.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

A0A5A7SMN4 Gag/pol protein8.2e-2771.07Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSGSK +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

A0A5A7TU93 Gag/pol protein1.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

A0A5A7TWB9 Gag/pol protein1.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

A0A5A7V4M1 Gag/pol protein1.8e-2670.25Show/hide
Query:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK
        FNVAE NGAVIDE SQVSFILESL +SFL FRSNAVMN + YTLTTLLNELQT++SLMK  GQ+ EANVATS ++F+R S+SGTKS PSSSG+K +KKKK
Subjt:  FNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMN-VEYTLTTLLNELQTYQSLMKSMGQEWEANVATS-KRFNRCSSSGTKSAPSSSGSKTFKKKK

Query:  ADGKGSKPYSTTA-TAKKGKA
          G+G+K     A T KK KA
Subjt:  ADGKGSKPYSTTA-TAKKGKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGTATAAGACCCGTAGTTACAACTCCTTCAACGTGGCTGAGTCGAACGGGGCCGTCATAGACGAGCAGAGTCAAGTCAGCTTCATTCTGGAATCTCTT
CTGAAGAGTTTTCTACCATTTCGCAGCAATGCGGTTATGAATGTGGAGTACACTCTTACCACGCTCTTAAACGAGCTGCAGACCTACCAGTCTCTTATGAAAAGT
ATGGGACAAGAATGGGAGGCAAACGTTGCCACCTCAAAAAGGTTCAACCGATGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTT
AAGAAGAAGAAGGCTGATGGTAAGGGGTCTAAACCTTACTCCACTACTGCCACTGCCAAGAAAGGCAAGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTGTATAAGACCCGTAGTTACAACTCCTTCAACGTGGCTGAGTCGAACGGGGCCGTCATAGACGAGCAGAGTCAAGTCAGCTTCATTCTGGAATCTCTT
CTGAAGAGTTTTCTACCATTTCGCAGCAATGCGGTTATGAATGTGGAGTACACTCTTACCACGCTCTTAAACGAGCTGCAGACCTACCAGTCTCTTATGAAAAGT
ATGGGACAAGAATGGGAGGCAAACGTTGCCACCTCAAAAAGGTTCAACCGATGTTCGTCCTCTGGAACCAAGTCTGCGCCCTCTTCTTCTGGAAGTAAGACTTTT
AAGAAGAAGAAGGCTGATGGTAAGGGGTCTAAACCTTACTCCACTACTGCCACTGCCAAGAAAGGCAAGGCCTAG
Protein sequenceShow/hide protein sequence
MSLYKTRSYNSFNVAESNGAVIDEQSQVSFILESLLKSFLPFRSNAVMNVEYTLTTLLNELQTYQSLMKSMGQEWEANVATSKRFNRCSSSGTKSAPSSSGSKTF
KKKKADGKGSKPYSTTATAKKGKA