| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043002.1 gag/pol protein [Cucumis melo var. makuwa] | 3.1e-52 | 45.97 | Show/hide |
Query: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA----------LWNGRKASLR
HWK NCPKYL KKK EGKYDLLVLETCLVEND +AWILDSRA NHVCSS Q S ++QL+ EMTLKVGTG+V+S A L + +L
Subjt: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA----------LWNGRKASLR
Query: HFHIW--------------------------------------------GCP--------------------------------AHVLMTNPKKLEPRSK
F + G P AHVLMTNPKKLE RS+
Subjt: HFHIW--------------------------------------------GCP--------------------------------AHVLMTNPKKLEPRSK
Query: VCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVPRRSGRL
+C FVGY KETRGGLFFDPQ NRVFVSTN + + D KPRSK+V+N +AT+ STRVVD+ G ++R VDE +TS Q HP Q L++PRRSGR+
Subjt: VCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVPRRSGRL
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 7.3e-46 | 28.84 | Show/hide |
Query: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
GHWK NCPKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DS A NHVCSSFQGISSWRQL+ GEMT++VGTG VVS +A
Subjt: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------LWNGR
LWNGR
Subjt: -----------------------------------------------------------------------------------------------LWNGR
Query: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
K SLRHF IWGCPAHVL NPKKLEPRSK+CLFVGYPK TRGG F+DP++N+VFVSTN + + + KPRSK+V+NE+S+E T STRVV++ T
Subjt: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
Query: RVVDEASTSRQPHPPQVLKVPRRSGRL
RVV S++R H PQ L+ PRRSGR+
Subjt: RVVDEASTSRQPHPPQVLKVPRRSGRL
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| KAA0050621.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-46 | 41.5 | Show/hide |
Query: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA--------------------
HWK NCPKYL KKK EG A NHVCSS Q SS++QL+ EMTLKVGTG V+S A
Subjt: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA--------------------
Query: --------------------------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNP
LW GRK SL HF IWGCPAHVL+TNP
Subjt: --------------------------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNP
Query: KKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVP
KKLEPRS++C FVGYPKETRG LFFDPQENRVFVSTN + + D KPRSK+V+N EAT+ STRVVD+ G ++R VDE +TS Q HP Q L++P
Subjt: KKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVP
Query: RRSGRL
RRSGR+
Subjt: RRSGRL
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 7.3e-46 | 28.84 | Show/hide |
Query: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
GHWK NCPKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DS A NHVCSSFQGISSWRQL+ GEMT++VGTG VVS +A
Subjt: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------LWNGR
LWNGR
Subjt: -----------------------------------------------------------------------------------------------LWNGR
Query: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
K SLRHF IWGCPAHVL NPKKLEPRSK+CLFVGYPK TRGG F+DP++N+VFVSTN + + + KPRSK+V+NE+S+E T STRVV++ T
Subjt: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
Query: RVVDEASTSRQPHPPQVLKVPRRSGRL
RVV S++R H PQ L+ PRRSGR+
Subjt: RVVDEASTSRQPHPPQVLKVPRRSGRL
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| TYK27179.1 gag/pol protein [Cucumis melo var. makuwa] | 7.1e-49 | 49.55 | Show/hide |
Query: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
GHWK NCPKYL KKK EGKYDLLVLETCLV ND +AWILDS A NHVCSS Q + ++QL+ EMTLKVGTG+V+S A
Subjt: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
Query: -------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKET
LW GRK +L HF IWGC AH+L+TNPKKLEPRS++C FVGYPKET
Subjt: -------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKET
Query: RGGLFFDPQENRVFVSTNTS
RGGLFFDPQENRVFVSTN +
Subjt: RGGLFFDPQENRVFVSTNTS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 3.5e-46 | 28.84 | Show/hide |
Query: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
GHWK NCPKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DS A NHVCSSFQGISSWRQL+ GEMT++VGTG VVS +A
Subjt: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------LWNGR
LWNGR
Subjt: -----------------------------------------------------------------------------------------------LWNGR
Query: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
K SLRHF IWGCPAHVL NPKKLEPRSK+CLFVGYPK TRGG F+DP++N+VFVSTN + + + KPRSK+V+NE+S+E T STRVV++ T
Subjt: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
Query: RVVDEASTSRQPHPPQVLKVPRRSGRL
RVV S++R H PQ L+ PRRSGR+
Subjt: RVVDEASTSRQPHPPQVLKVPRRSGRL
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| A0A5A7TI08 Gag/pol protein | 1.5e-52 | 45.97 | Show/hide |
Query: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA----------LWNGRKASLR
HWK NCPKYL KKK EGKYDLLVLETCLVEND +AWILDSRA NHVCSS Q S ++QL+ EMTLKVGTG+V+S A L + +L
Subjt: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA----------LWNGRKASLR
Query: HFHIW--------------------------------------------GCP--------------------------------AHVLMTNPKKLEPRSK
F + G P AHVLMTNPKKLE RS+
Subjt: HFHIW--------------------------------------------GCP--------------------------------AHVLMTNPKKLEPRSK
Query: VCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVPRRSGRL
+C FVGY KETRGGLFFDPQ NRVFVSTN + + D KPRSK+V+N +AT+ STRVVD+ G ++R VDE +TS Q HP Q L++PRRSGR+
Subjt: VCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVPRRSGRL
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| A0A5A7UAP2 Gag/pol protein | 9.3e-47 | 41.5 | Show/hide |
Query: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA--------------------
HWK NCPKYL KKK EG A NHVCSS Q SS++QL+ EMTLKVGTG V+S A
Subjt: HWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA--------------------
Query: --------------------------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNP
LW GRK SL HF IWGCPAHVL+TNP
Subjt: --------------------------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNP
Query: KKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVP
KKLEPRS++C FVGYPKETRG LFFDPQENRVFVSTN + + D KPRSK+V+N EAT+ STRVVD+ G ++R VDE +TS Q HP Q L++P
Subjt: KKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTTRVVDEASTSRQPHPPQVLKVP
Query: RRSGRL
RRSGR+
Subjt: RRSGRL
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| A0A5D3CPJ6 Gag/pol protein | 3.5e-46 | 28.84 | Show/hide |
Query: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
GHWK NCPKYLAEKKKA +GKYDLLVLETCLVENDDSAWI+DS A NHVCSSFQGISSWRQL+ GEMT++VGTG VVS +A
Subjt: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -----------------------------------------------------------------------------------------------LWNGR
LWNGR
Subjt: -----------------------------------------------------------------------------------------------LWNGR
Query: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
K SLRHF IWGCPAHVL NPKKLEPRSK+CLFVGYPK TRGG F+DP++N+VFVSTN + + + KPRSK+V+NE+S+E T STRVV++ T
Subjt: KASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKETRGGLFFDPQENRVFVSTNTS----TRVVDQKPRSKVVINEISEEATNTSTRVVDQTGTTT
Query: RVVDEASTSRQPHPPQVLKVPRRSGRL
RVV S++R H PQ L+ PRRSGR+
Subjt: RVVDEASTSRQPHPPQVLKVPRRSGRL
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| A0A5D3DUY5 Gag/pol protein | 3.4e-49 | 49.55 | Show/hide |
Query: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
GHWK NCPKYL KKK EGKYDLLVLETCLV ND +AWILDS A NHVCSS Q + ++QL+ EMTLKVGTG+V+S A
Subjt: GHWKGNCPKYLAEKKKASEGKYDLLVLETCLVENDDSAWILDSRAANHVCSSFQGISSWRQLDAGEMTLKVGTGEVVSVVA-------------------
Query: -------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKET
LW GRK +L HF IWGC AH+L+TNPKKLEPRS++C FVGYPKET
Subjt: -------------------------------------------------------LWNGRKASLRHFHIWGCPAHVLMTNPKKLEPRSKVCLFVGYPKET
Query: RGGLFFDPQENRVFVSTNTS
RGGLFFDPQENRVFVSTN +
Subjt: RGGLFFDPQENRVFVSTNTS
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