CuGenDBv2

Gene ID	Moc03g15230
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC111022160
Genome location	chr3:10226781..10227671
RNA-Seq Expression	Moc03g15230
Synteny	Moc03g15230
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022143608.1 uncharacterized protein LOC111013464 [Momordica charantia]

5.6e-21

94.74

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Query:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQR RAAPKKQDPA VLAL+IAT
Subjt:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

XP_022150317.1 uncharacterized protein LOC111018514 [Momordica charantia]

2.7e-23

90.48

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Query:  LDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        LDHPTKMMLNNAANGAFTKKTFNEIVDIL DLASHNELWCSQRS+ APKKQD A VLAL+IAT
Subjt:  LDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

XP_022155016.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia]

2.3e-27

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Query:  IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDIL DLASHNELWCSQRS+ APKKQD A VLAL+I T
Subjt:  IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]

1.1e-45

45.02

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Query:  MADIPPRDPVDPPAVNGNMRDHARNDEFNHIQMADNRDVAMREYVATAFQNFDSGI--------------------------------------------
        MADIPPRDPVDPPAVNGNMRDHARNDEFN+IQMADNRDVAMREY ATAFQNFDSGI                                            
Subjt:  MADIPPRDPVDPPAVNGNMRDHARNDEFNHIQMADNRDVAMREYVATAFQNFDSGI--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
         IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPA VLAL+IAT
Subjt:  -IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]

3.3e-21

94.74

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Query:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPA VLAL+IA+
Subjt:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CR45 uncharacterized protein LOC111013464

2.7e-21

94.74

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Query:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQR RAAPKKQDPA VLAL+IAT
Subjt:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

A0A6J1DAE9 uncharacterized protein LOC111018514

1.3e-23

90.48

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Query:  LDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        LDHPTKMMLNNAANGAFTKKTFNEIVDIL DLASHNELWCSQRS+ APKKQD A VLAL+IAT
Subjt:  LDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

A0A6J1DQF5 LOW QUALITY PROTEIN: uncharacterized protein LOC111022160

1.1e-27

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Query:  IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDIL DLASHNELWCSQRS+ APKKQD A VLAL+I T
Subjt:  IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

A0A6J1DW02 uncharacterized protein LOC111024897

5.4e-46

45.02

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Query:  MADIPPRDPVDPPAVNGNMRDHARNDEFNHIQMADNRDVAMREYVATAFQNFDSGI--------------------------------------------
        MADIPPRDPVDPPAVNGNMRDHARNDEFN+IQMADNRDVAMREY ATAFQNFDSGI                                            
Subjt:  MADIPPRDPVDPPAVNGNMRDHARNDEFNHIQMADNRDVAMREYVATAFQNFDSGI--------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
         IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPA VLAL+IAT
Subjt:  -IEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

A0A6J1DYG0 uncharacterized protein LOC111025764

1.6e-21

94.74

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Query:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT
        MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPA VLAL+IA+
Subjt:  MMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAAPKKQDPAEVLALEIAT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCAGATATTCCACCTCGTGATCCGGTTGATCCACCTGCTGTTAACGGTAATATGAGGGATCATGCAAGAAATGATGAATTCAACCATATCCAGATGGCGGACAACAG
AGACGTGGCAATGCGAGAATATGTCGCCACGGCTTTTCAGAACTTTGATTCAGGGATAATAGAACATTTCTTTAGAGGTTTAGATCATCCTACTAAGATGATGCTAAACA
ATGCTGCCAATGGAGCCTTTACAAAGAAGACATTCAACGAGATAGTTGACATCCTAAATGACTTAGCTTCACACAACGAACTATGGTGTTCGCAAAGATCTAGGGCAGCA
CCAAAGAAGCAAGATCCAGCTGAAGTTTTGGCTCTGGAGATTGCGACCCTCGATGCAAAAAGAGATGGTTACAATGAACCAGAGGCTAAAAAGAGATGGCATTGGGAATA
CAAAATCCATTAG

mRNA sequence

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Protein sequence

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MADIPPRDPVDPPAVNGNMRDHARNDEFNHIQMADNRDVAMREYVATAFQNFDSGIIEHFFRGLDHPTKMMLNNAANGAFTKKTFNEIVDILNDLASHNELWCSQRSRAA
PKKQDPAEVLALEIATLDAKRDGYNEPEAKKRWHWEYKIH

Moc03g15230 (gene) of Bitter gourd (OHB3-1) v2 genome