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Moc03g15320 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g15320
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr3:10268669..10269379
RNA-Seq ExpressionMoc03g15320
SyntenyMoc03g15320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142953.1 uncharacterized protein LOC111012947 [Momordica charantia]6.2e-4348.87Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA
        MST S+LLP DPEIE+T ++ R+EQRL+KQ  K QKE+E E                              +    A N   N I +AD RD  MR+YAA
Subjt:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA

Query:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV
           ++ +S + N  PA A FE KPMM QML  IG F G EHEDP  HLKSFI++AN FRLPGI+DDALRLTLFPFSL  +A AWLNAFP  +I T   +V
Subjt:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV

Query:  EKFLRQYDREPVHEAYDREPV
        +KFL +Y   P   A  RE +
Subjt:  EKFLRQYDREPVHEAYDREPV

XP_022150327.1 uncharacterized protein LOC111018524 [Momordica charantia]5.3e-4273.04Show/hide
Query:  MADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQI
        M +IPP++P DPP  NGN+    +NNEFNHI MADNRDV MREYAATAFQN DS I+NPIP  AN ELKP+MFQMLQ +G FGG+EHEDPHDHLK+F+QI
Subjt:  MADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQI

Query:  ANAFRLPGITDDALR
        A AFR P ITDDALR
Subjt:  ANAFRLPGITDDALR

XP_022155016.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022160 [Momordica charantia]5.6e-5255.4Show/hide
Query:  EQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKP
        E+R   Q  ++K ++ E   ESE EST T M +IPP++P DPP  NGN+                            AFQN DS I+NPIP  ANFELKP
Subjt:  EQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKP

Query:  MMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVEKFLRQYDREPVH----------E
        +MFQMLQ +G FGG+EH+DPHDHLK+F QIA AFR P ITDDALRLTLFPFSLKD+AR WLN FPPGSITTW SLVEKFL +Y     H           
Subjt:  MMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVEKFLRQYDREPVH----------E

Query:  AYDREPVHEAYDR
         YDREPVHEA++R
Subjt:  AYDREPVHEAYDR

XP_022158408.1 uncharacterized protein LOC111024897, partial [Momordica charantia]4.8e-10484.32Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAAT
        MSTRSFLLPLDPEIERTLRKTR+EQRLRKQLE QKEREGEISPESEVESTSTSMADIPPRDPVDPPA NGN+R HARN+EFN+IQMADNRDV MREYAAT
Subjt:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAAT

Query:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVE
        AFQNFDSGIVNPIPAH NFELKPMMFQMLQ IGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDA  LTLFPFSLKD+AR  LNAFP GSITTWGSLVE
Subjt:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVE

Query:  KFL-------------------RQYDREPVHEAYDR
        KFL                   RQYDREPVHEA++R
Subjt:  KFL-------------------RQYDREPVHEAYDR

XP_022159074.1 uncharacterized protein LOC111025516 [Momordica charantia]1.7e-4550.23Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA
        MST SFLLP +PEIE+T ++ R+EQRL+KQ  K QKE+E E                              +    A N   N I MAD RD  MR+YAA
Subjt:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA

Query:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV
        T  ++ +S ++NP+P  A FE KPMM QML  IG FGG EHEDP  HLKSFI++AN FRLPGI+DDALRLTLF FSL  +A AWLNAF   +ITTW  +V
Subjt:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV

Query:  EKFLRQYDREPVHEAYDREPV
        +KFL +Y   P   A  RE +
Subjt:  EKFLRQYDREPVHEAYDREPV

TrEMBL top hitse value%identityAlignment
A0A6J1CPJ3 uncharacterized protein LOC1110129473.0e-4348.87Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA
        MST S+LLP DPEIE+T ++ R+EQRL+KQ  K QKE+E E                              +    A N   N I +AD RD  MR+YAA
Subjt:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA

Query:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV
           ++ +S + N  PA A FE KPMM QML  IG F G EHEDP  HLKSFI++AN FRLPGI+DDALRLTLFPFSL  +A AWLNAFP  +I T   +V
Subjt:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV

Query:  EKFLRQYDREPVHEAYDREPV
        +KFL +Y   P   A  RE +
Subjt:  EKFLRQYDREPVHEAYDREPV

A0A6J1DAG1 uncharacterized protein LOC1110185242.5e-4273.04Show/hide
Query:  MADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQI
        M +IPP++P DPP  NGN+    +NNEFNHI MADNRDV MREYAATAFQN DS I+NPIP  AN ELKP+MFQMLQ +G FGG+EHEDPHDHLK+F+QI
Subjt:  MADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQI

Query:  ANAFRLPGITDDALR
        A AFR P ITDDALR
Subjt:  ANAFRLPGITDDALR

A0A6J1DQF5 LOW QUALITY PROTEIN: uncharacterized protein LOC1110221602.7e-5255.4Show/hide
Query:  EQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKP
        E+R   Q  ++K ++ E   ESE EST T M +IPP++P DPP  NGN+                            AFQN DS I+NPIP  ANFELKP
Subjt:  EQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIVNPIPAHANFELKP

Query:  MMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVEKFLRQYDREPVH----------E
        +MFQMLQ +G FGG+EH+DPHDHLK+F QIA AFR P ITDDALRLTLFPFSLKD+AR WLN FPPGSITTW SLVEKFL +Y     H           
Subjt:  MMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVEKFLRQYDREPVH----------E

Query:  AYDREPVHEAYDR
         YDREPVHEA++R
Subjt:  AYDREPVHEAYDR

A0A6J1DW02 uncharacterized protein LOC1110248972.3e-10484.32Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAAT
        MSTRSFLLPLDPEIERTLRKTR+EQRLRKQLE QKEREGEISPESEVESTSTSMADIPPRDPVDPPA NGN+R HARN+EFN+IQMADNRDV MREYAAT
Subjt:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAAT

Query:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVE
        AFQNFDSGIVNPIPAH NFELKPMMFQMLQ IGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDA  LTLFPFSLKD+AR  LNAFP GSITTWGSLVE
Subjt:  AFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVE

Query:  KFL-------------------RQYDREPVHEAYDR
        KFL                   RQYDREPVHEA++R
Subjt:  KFL-------------------RQYDREPVHEAYDR

A0A6J1E1A9 uncharacterized protein LOC1110255168.5e-4650.23Show/hide
Query:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA
        MST SFLLP +PEIE+T ++ R+EQRL+KQ  K QKE+E E                              +    A N   N I MAD RD  MR+YAA
Subjt:  MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEK-QKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAA

Query:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV
        T  ++ +S ++NP+P  A FE KPMM QML  IG FGG EHEDP  HLKSFI++AN FRLPGI+DDALRLTLF FSL  +A AWLNAF   +ITTW  +V
Subjt:  TAFQNFDSGIVNPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLV

Query:  EKFLRQYDREPVHEAYDREPV
        +KFL +Y   P   A  RE +
Subjt:  EKFLRQYDREPVHEAYDREPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACAAGATCTTTTCTTCTACCCCTTGACCCTGAGATTGAGCGGACCCTTCGAAAAACTCGACAGGAGCAAAGACTTCGAAAACAACTAGAAAAGCAAAAAGAGAG
AGAAGGTGAAATCAGTCCTGAAAGTGAGGTAGAGAGTACGAGCACATCAATGGCAGATATTCCACCTCGTGATCCGGTTGATCCACCTGCTTTTAACGGTAATATAAGGT
ATCACGCAAGAAATAATGAATTCAACCATATCCAGATGGCGGACAACAGAGACGTGACAATGCGAGAATATGCCGCCACGGCTTTTCAGAACTTTGATTCAGGGATAGTC
AACCCTATTCCAGCCCACGCAAACTTTGAGCTTAAACCAATGATGTTCCAAATGTTGCAGATAATTGGACATTTTGGAGGGCAGGAACATGAGGATCCACATGATCATCT
GAAATCATTCATTCAAATTGCAAATGCATTTCGATTACCTGGTATAACAGACGATGCTCTTAGACTAACACTTTTTCCATTTTCTTTGAAGGACAAAGCTAGAGCATGGC
TCAATGCATTTCCACCAGGATCCATCACCACATGGGGGTCGTTAGTGGAGAAGTTCTTAAGACAGTATGATCGTGAACCTGTTCACGAGGCGTATGATCGTGAACCTGTT
CACGAGGCGTATGATCGTGAACCTGTTCAGAGAGGAGATCATCTCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCACAAGATCTTTTCTTCTACCCCTTGACCCTGAGATTGAGCGGACCCTTCGAAAAACTCGACAGGAGCAAAGACTTCGAAAACAACTAGAAAAGCAAAAAGAGAG
AGAAGGTGAAATCAGTCCTGAAAGTGAGGTAGAGAGTACGAGCACATCAATGGCAGATATTCCACCTCGTGATCCGGTTGATCCACCTGCTTTTAACGGTAATATAAGGT
ATCACGCAAGAAATAATGAATTCAACCATATCCAGATGGCGGACAACAGAGACGTGACAATGCGAGAATATGCCGCCACGGCTTTTCAGAACTTTGATTCAGGGATAGTC
AACCCTATTCCAGCCCACGCAAACTTTGAGCTTAAACCAATGATGTTCCAAATGTTGCAGATAATTGGACATTTTGGAGGGCAGGAACATGAGGATCCACATGATCATCT
GAAATCATTCATTCAAATTGCAAATGCATTTCGATTACCTGGTATAACAGACGATGCTCTTAGACTAACACTTTTTCCATTTTCTTTGAAGGACAAAGCTAGAGCATGGC
TCAATGCATTTCCACCAGGATCCATCACCACATGGGGGTCGTTAGTGGAGAAGTTCTTAAGACAGTATGATCGTGAACCTGTTCACGAGGCGTATGATCGTGAACCTGTT
CACGAGGCGTATGATCGTGAACCTGTTCAGAGAGGAGATCATCTCCTTTAG
Protein sequenceShow/hide protein sequence
MSTRSFLLPLDPEIERTLRKTRQEQRLRKQLEKQKEREGEISPESEVESTSTSMADIPPRDPVDPPAFNGNIRYHARNNEFNHIQMADNRDVTMREYAATAFQNFDSGIV
NPIPAHANFELKPMMFQMLQIIGHFGGQEHEDPHDHLKSFIQIANAFRLPGITDDALRLTLFPFSLKDKARAWLNAFPPGSITTWGSLVEKFLRQYDREPVHEAYDREPV
HEAYDREPVQRGDHLL