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Moc03g15480 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g15480
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionLINE-1 reverse transcriptase-like
Genome locationchr3:10334684..10336500
RNA-Seq ExpressionMoc03g15480
SyntenyMoc03g15480
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0009058 - biosynthetic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0019538 - protein metabolic process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0140096 - catalytic activity, acting on a protein (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5780473.1 putative RNA-directed DNA polymerase [Helianthus annuus]1.6e-0655.36Show/hide
Query:  MLSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSI
        +LS GGRLTL +SVL S+P+YYFS+ KA K VI+ +++LMR F+W G  ++ GK I
Subjt:  MLSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSI

PON81162.1 hypothetical protein TorRG33x02_230460, partial [Trema orientale]3.2e-0753.33Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKS-MDKLMRDFIWNGGAHRPGKSIAVFS
        LS+GGRLTL +SVL+SIPIYY S+ +A   VI+  ++KLMRDF+W GG H  G  +  ++
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKS-MDKLMRDFIWNGGAHRPGKSIAVFS

RVW43437.1 putative ribonuclease H protein [Vitis vinifera]1.6e-0637.97Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASGERRGDFAWERL
        +SKGGR+TL +SVL S+PIY+ S+ +  K V + +DK+ RDF+W GG+      +  +    +A ++G   GD  W+++
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASGERRGDFAWERL

RVW86677.1 LINE-1 reverse transcriptase-like [Vitis vinifera]1.6e-0638.37Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASGERR--------GDFAWER
        LSKGGR+TL +S L S+P+Y  S+ +  KGV + ++KL RDF+W GG+ +   +++V  R   A     +R         DF WE+
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASGERR--------GDFAWER

XP_030497604.1 uncharacterized protein LOC115713262 [Cannabis sativa]1.4e-0765.22Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNG
        LS+GGRLTL QSVL+S PIY+ S+ KA K V K+++KLMRDF+W G
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNG

TrEMBL top hitse value%identityAlignment
A0A803PW65 Uncharacterized protein8.1e-0948.53Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASG
        LS+GGRLTL QSVL+S+PIYY S+ KA K V+K+++K+MRDF W GG    G  +  +    +  + G
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASG

A0A803PZS1 Uncharacterized protein8.1e-0968.09Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGG
        LS+GGRLTL QSVL+S+PIYY S+ KA K VIK+++K+MRDF W GG
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGG

A0A803QEA6 Uncharacterized protein1.1e-0848.53Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASG
        LS+GGRLTL QSVL+S+PIYY S+ KA K V+K ++K+MR+F W GG    G  +  +    +  A G
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASG

A0A803QNN3 Uncharacterized protein8.1e-0965.96Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGG
        LS+GGRLTL QSVL+S+PIYY S+ KA K V+ S++K+MRDF+W GG
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGG

A0A803QQM3 Uncharacterized protein1.1e-0848.53Show/hide
Query:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASG
        LS+GGRLTL QSVL+S+PIY+ S+ KA K V+K ++K+MRDF W GG    G  +  +    +  A G
Subjt:  LSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCTAAAGGTGGTAGGCTTACTCTGGCACAATCAGTCCTTAATAGCATCCCAATTTATTATTTCTCGATTCTTAAAGCCTTGAAGGGTGTGATCAAATCG
ATGGATAAGCTTATGAGGGATTTTATATGGAATGGAGGGGCTCATAGACCGGGAAAGTCTATAGCAGTGTTTTCGAGGCGCACCCAGGCGAGCGCCTCAGGCGAG
AGGCGAGGCGATTTCGCCTGGGAGCGCCTTAAATGGTGCCAAGGCGAGCGCCTTCGACTGGGCGCTTGCCTTGTGCGCCTCACTTCAGTCAGGCGTCGTCTTTTT
ATCGCCTCTCGCCTCAAGGCGATCAAAGGACTTGTCACCTTGAGGTGCGCCTTGTGTCACAATCACACTTTAACAGGACTCACGAAGCGATTGTGCGGCACTTGC
TTTCACCCTCTAGCAAGTCAGCCAATACGGAAACGAATAGCCGGTGGCATAAAGGCTATATGTCGCAACCTCCACCCCCGTTCTCGAGAAAGCGGTTTTGGAAAA
CGGGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCTAAAGGTGGTAGGCTTACTCTGGCACAATCAGTCCTTAATAGCATCCCAATTTATTATTTCTCGATTCTTAAAGCCTTGAAGGGTGTGATCAAATCG
ATGGATAAGCTTATGAGGGATTTTATATGGAATGGAGGGGCTCATAGACCGGGAAAGTCTATAGCAGTGTTTTCGAGGCGCACCCAGGCGAGCGCCTCAGGCGAG
AGGCGAGGCGATTTCGCCTGGGAGCGCCTTAAATGGTGCCAAGGCGAGCGCCTTCGACTGGGCGCTTGCCTTGTGCGCCTCACTTCAGTCAGGCGTCGTCTTTTT
ATCGCCTCTCGCCTCAAGGCGATCAAAGGACTTGTCACCTTGAGGTGCGCCTTGTGTCACAATCACACTTTAACAGGACTCACGAAGCGATTGTGCGGCACTTGC
TTTCACCCTCTAGCAAGTCAGCCAATACGGAAACGAATAGCCGGTGGCATAAAGGCTATATGTCGCAACCTCCACCCCCGTTCTCGAGAAAGCGGTTTTGGAAAA
CGGGATTAG
Protein sequenceShow/hide protein sequence
MLSKGGRLTLAQSVLNSIPIYYFSILKALKGVIKSMDKLMRDFIWNGGAHRPGKSIAVFSRRTQASASGERRGDFAWERLKWCQGERLRLGACLVRLTSVRRRLF
IASRLKAIKGLVTLRCALCHNHTLTGLTKRLCGTCFHPLASQPIRKRIAGGIKAICRNLHPRSRESGFGKRD