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Moc03g15500 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g15500
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionZinc finger, C3HC4 type family protein
Genome locationchr3:10339971..10343666
RNA-Seq ExpressionMoc03g15500
SyntenyMoc03g15500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583307.1 General transcription and DNA repair factor IIH subunit TFB1-1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3277.89Show/hide
Query:  FSAFSHVLMLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        FS  ++V M+S+ A+   ERLLGAALGSVFAGVVVFEQRKS+Y SIS+NYPP  QSPMRKPV+AKKYGPE SHLWN AVDQTFGP+IQALSSRGW
Subjt:  FSAFSHVLMLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
KAG7019216.1 hypothetical protein SDJN02_18174, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3277.89Show/hide
Query:  FSAFSHVLMLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        FS  ++V M+S+ A+   ERLLGAALGSVFAGVVVFEQRKS+Y SIS+NYPP  QSPMRKPV+AKKYGPE SHLWN AVDQTFGP+IQALSSRGW
Subjt:  FSAFSHVLMLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
XP_004152895.1 uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]2.6e-3285.06Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLG ALGSVFAGVVVFEQRKSLY+SISENYPPA QSPMRKPV+AKKYGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
XP_008457526.1 PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo]2.6e-3285.06Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLG ALGS FAGVVVFEQRKSLY+SISENYPPA QSPMRKPV+AKKYGPE SHLWNRAVDQTFGPMIQALSSRGW
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
XP_022156577.1 uncharacterized protein LOC111023455 [Momordica charantia]1.1e-3591.95Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
TrEMBL top hitse value%identityAlignment
A0A0A0LXB2 Uncharacterized protein3.4e-3383.33Show/hide
Query:  HVLMLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        +V M+S+ A+   ERLLG ALGSVFAGVVVFEQRKSLY+SISENYPPA QSPMRKPV+AKKYGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  HVLMLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
A0A1S3C5P6 uncharacterized protein LOC103497197 isoform X21.3e-3285.06Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLG ALGS FAGVVVFEQRKSLY+SISENYPPA QSPMRKPV+AKKYGPE SHLWNRAVDQTFGPMIQALSSRGW
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
A0A5D3BR76 Uncharacterized protein1.3e-3285.06Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLG ALGS FAGVVVFEQRKSLY+SISENYPPA QSPMRKPV+AKKYGPE SHLWNRAVDQTFGPMIQALSSRGW
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
A0A6J1DSC3 uncharacterized protein LOC1110234555.5e-3691.95Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
A0A6J1HZ79 uncharacterized protein LOC1114694461.8e-3182.76Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLGAALGSVFAGVVVFEQRKSLY SIS+NYPP  QSPMRKPV+AKKYGPE SHLWN AVDQTFGP+IQALSSRGW
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28430.1 unknown protein4.5e-1446.59Show/hide
Query:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISE-NYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW
        M+S+ A+   ERLLG  LGS   G +VFEQRK ++ S+S+      +Q+ +   +  KKY  E + LWN+AVDQTF P I+ LSSR W
Subjt:  MLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISE-NYPPANQSPMRKPVVAKKYGPEVSHLWNRAVDQTFGPMIQALSSRGW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTCGAAGATCTGTGTTCCTTGTCAATGTGTGGTACTTTGTTAGAAATTTCTACGTTAGTTCCGCCCAAATGGTGATTGAATCTGGTTTTAGCGCATTCAGCCA
TGTCCTCATGTTATCCCTGAGAGCGAAAGGAAACAATGAGCGACTGCTTGGTGCTGCATTGGGGAGCGTATTCGCCGGGGTTGTCGTTTTTGAGCAACGGAAAAGCTTAT
ATAGGTCCATTTCGGAAAATTATCCGCCCGCCAACCAATCTCCGATGAGAAAACCTGTAGTAGCAAAGAAATATGGTCCAGAGGTTTCGCACCTATGGAATAGAGCTGTT
GACCAGACATTTGGACCCATGATTCAGGCTCTCAGTTCGCGGGGATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTCGAAGATCTGTGTTCCTTGTCAATGTGTGGTACTTTGTTAGAAATTTCTACGTTAGTTCCGCCCAAATGGTGATTGAATCTGGTTTTAGCGCATTCAGCCA
TGTCCTCATGTTATCCCTGAGAGCGAAAGGAAACAATGAGCGACTGCTTGGTGCTGCATTGGGGAGCGTATTCGCCGGGGTTGTCGTTTTTGAGCAACGGAAAAGCTTAT
ATAGGTCCATTTCGGAAAATTATCCGCCCGCCAACCAATCTCCGATGAGAAAACCTGTAGTAGCAAAGAAATATGGTCCAGAGGTTTCGCACCTATGGAATAGAGCTGTT
GACCAGACATTTGGACCCATGATTCAGGCTCTCAGTTCGCGGGGATGGTGA
Protein sequenceShow/hide protein sequence
MSSRRSVFLVNVWYFVRNFYVSSAQMVIESGFSAFSHVLMLSLRAKGNNERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPANQSPMRKPVVAKKYGPEVSHLWNRAV
DQTFGPMIQALSSRGW