; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Moc03g15830 (gene) of Bitter gourd (OHB3-1) v2 genome

Gene IDMoc03g15830
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRibonuclease H
Genome locationchr3:10554091..10555160
RNA-Seq ExpressionMoc03g15830
SyntenyMoc03g15830
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145129.1 uncharacterized protein LOC111014646 [Momordica charantia]5.1e-6467.43Show/hide
Query:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD------------
        MTPERSPRRSDDNCS KRRLNLDDPQVGG EDGTSQ N ER EGLPE HALTTPEP QKQFAVLEDKVEGMLQ MTQV+RQ+E+QESD            
Subjt:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD------------

Query:  --------EATNP------------------DFQ----QHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTE
                E+TN                   D Q    QHK   PNGG+S+ D+RN EP+S DKGKP DQPESS KRHNQKEKGFDL+ELLDQADSPFTE
Subjt:  --------EATNP------------------DFQ----QHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTE

Query:  EIMKEKVPPKFNLPTVKQ
        EIM+EKVPPKF LPTVKQ
Subjt:  EIMKEKVPPKFNLPTVKQ

XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]5.8e-6075Show/hide
Query:  MKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQ
        MKEKVPPKF LP +K++DG+TDP+DHLDVY EW DIYG++EA+R RVFS TL  S RIWF+QLKR SISSFK LARAFVTQF GG  RSRPVAYLLTIKQ
Subjt:  MKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQ

Query:  RTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA
        + TESL DYVARFN+EKLQVEGLTD V LL F+SG+KDE L FSF K+T  TFSEA +RA
Subjt:  RTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA

XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]1.1e-7186.5Show/hide
Query:  EEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLT
        EEIMK KVPPKF LPTVKQFDGT D VDHLD Y EWMDIYGVSEAV+ RVFSTTL+ SAR+WFRQLKRGSISSFKSLA+AFVTQF+GGR RSRPVAYLLT
Subjt:  EEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLT

Query:  IKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA
        IKQR TESLHDYVARFNEEKLQVEGLT+ VSL+AFMS I+DEHLSFSF KKTPSTFSEAL+RA
Subjt:  IKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.8e-13075.29Show/hide
Query:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD--EATN------
        MTPERSPRRSDD+CS KRRLNL DPQVGG EDGTSQ N ER EGL E  ALTTPEP QKQFAVLEDK    +  +    +     ESD  E+TN      
Subjt:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD--EATN------

Query:  ----------------PDFQQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQ
                           +QHKSP PNGGKS+ D+RN EPIS DKGKP D+PESS KRH+ KEKGFDL+ELLDQADSPFTEEIM+EKVPPKF LPTVKQ
Subjt:  ----------------PDFQQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQ

Query:  FDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEE
        FD TTDPVDHLD Y EWMDIYGVSEAVR RVFSTTLN SARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESL DYVARFNEE
Subjt:  FDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEE

Query:  KLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA
        KLQVEGLTD VSLLAFMSG++DEHLSFSF K+TP+TFSEAL+RA
Subjt:  KLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA

XP_022159109.1 uncharacterized protein LOC111025548 [Momordica charantia]3.0e-10184.44Show/hide
Query:  QQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMD
        +QHKS  PNG K++ DNRN EPIS +KGKP D+PESS KRHNQKEKGFDL+ELL QADSPFTEEIM+EKVPPKF LPTVK FDG T+PVDHLD Y EWMD
Subjt:  QQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMD

Query:  IYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSG
        IYGVS+A+R RVFSTTLN SARIWFRQLKRGSISSFKSLARAF+TQFVGGRCRSRPVAYLLTIKQRT ESLHDYVARFNEEKLQ+EGLTD VSLLAFMSG
Subjt:  IYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSG

Query:  IKDEHLSFSFRKKTPSTFSEALNRA
        ++DEHLSFSF K+TPSTFSEAL+RA
Subjt:  IKDEHLSFSFRKKTPSTFSEALNRA

TrEMBL top hitse value%identityAlignment
A0A6J1CUA7 uncharacterized protein LOC1110146462.5e-6467.43Show/hide
Query:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD------------
        MTPERSPRRSDDNCS KRRLNLDDPQVGG EDGTSQ N ER EGLPE HALTTPEP QKQFAVLEDKVEGMLQ MTQV+RQ+E+QESD            
Subjt:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD------------

Query:  --------EATNP------------------DFQ----QHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTE
                E+TN                   D Q    QHK   PNGG+S+ D+RN EP+S DKGKP DQPESS KRHNQKEKGFDL+ELLDQADSPFTE
Subjt:  --------EATNP------------------DFQ----QHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTE

Query:  EIMKEKVPPKFNLPTVKQ
        EIM+EKVPPKF LPTVKQ
Subjt:  EIMKEKVPPKFNLPTVKQ

A0A6J1D3B7 uncharacterized protein LOC1110166192.8e-6075Show/hide
Query:  MKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQ
        MKEKVPPKF LP +K++DG+TDP+DHLDVY EW DIYG++EA+R RVFS TL  S RIWF+QLKR SISSFK LARAFVTQF GG  RSRPVAYLLTIKQ
Subjt:  MKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQ

Query:  RTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA
        + TESL DYVARFN+EKLQVEGLTD V LL F+SG+KDE L FSF K+T  TFSEA +RA
Subjt:  RTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA

A0A6J1D7D2 uncharacterized protein LOC1110183075.5e-7286.5Show/hide
Query:  EEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLT
        EEIMK KVPPKF LPTVKQFDGT D VDHLD Y EWMDIYGVSEAV+ RVFSTTL+ SAR+WFRQLKRGSISSFKSLA+AFVTQF+GGR RSRPVAYLLT
Subjt:  EEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLT

Query:  IKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA
        IKQR TESLHDYVARFNEEKLQVEGLT+ VSL+AFMS I+DEHLSFSF KKTPSTFSEAL+RA
Subjt:  IKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA

A0A6J1DWY0 uncharacterized protein LOC1110252938.9e-13175.29Show/hide
Query:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD--EATN------
        MTPERSPRRSDD+CS KRRLNL DPQVGG EDGTSQ N ER EGL E  ALTTPEP QKQFAVLEDK    +  +    +     ESD  E+TN      
Subjt:  MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESD--EATN------

Query:  ----------------PDFQQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQ
                           +QHKSP PNGGKS+ D+RN EPIS DKGKP D+PESS KRH+ KEKGFDL+ELLDQADSPFTEEIM+EKVPPKF LPTVKQ
Subjt:  ----------------PDFQQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQ

Query:  FDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEE
        FD TTDPVDHLD Y EWMDIYGVSEAVR RVFSTTLN SARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESL DYVARFNEE
Subjt:  FDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEE

Query:  KLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA
        KLQVEGLTD VSLLAFMSG++DEHLSFSF K+TP+TFSEAL+RA
Subjt:  KLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSEALNRA

A0A6J1E1E7 uncharacterized protein LOC1110255481.5e-10184.44Show/hide
Query:  QQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMD
        +QHKS  PNG K++ DNRN EPIS +KGKP D+PESS KRHNQKEKGFDL+ELL QADSPFTEEIM+EKVPPKF LPTVK FDG T+PVDHLD Y EWMD
Subjt:  QQHKSPTPNGGKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMD

Query:  IYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSG
        IYGVS+A+R RVFSTTLN SARIWFRQLKRGSISSFKSLARAF+TQFVGGRCRSRPVAYLLTIKQRT ESLHDYVARFNEEKLQ+EGLTD VSLLAFMSG
Subjt:  IYGVSEAVRYRVFSTTLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSG

Query:  IKDEHLSFSFRKKTPSTFSEALNRA
        ++DEHLSFSF K+TPSTFSEAL+RA
Subjt:  IKDEHLSFSFRKKTPSTFSEALNRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTACCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGATCCGAGGATGGGACCAGC
CAGTCAAACCCGGAACGTCATGAAGGGTTGCCCGAGACGCATGCACTAACGACCCCTGAGCCACCCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGC
ATGCTGCAATGCATGACCCAAGTCGTTCGACAATTCGAGCAACAAGAGTCCGACGAGGCAACGAACCCGGATTTTCAGCAACATAAATCCCCGACACCAAACGGG
GGCAAGAGCAACCAGGATAACCGAAACTTTGAGCCGATAAGCCGCGACAAAGGCAAACCGACAGATCAGCCAGAGTCTTCAGTGAAGAGACATAACCAAAAGGAA
AAGGGATTCGACCTCAAAGAACTTCTTGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAAAGAGAAGGTCCCTCCAAAATTCAATCTACCCACGGTGAAA
CAATTCGACGGGACGACCGACCCAGTGGACCATCTAGATGTTTATCTTGAATGGATGGATATCTACGGGGTGTCAGAGGCGGTCAGGTATCGGGTATTCTCGACT
ACATTAAACGAGTCAGCCAGAATATGGTTCCGACAATTAAAACGAGGGTCAATCTCGAGTTTCAAGAGCCTGGCCAGAGCATTCGTGACCCAGTTTGTAGGGGGA
CGGTGTCGGAGCCGACCCGTGGCTTATCTTTTAACTATTAAACAGAGGACGACAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAAAAGCTGCAGGTA
GAAGGCCTTACAGACGTTGTATCTCTGCTGGCCTTCATGTCCGGCATCAAGGATGAGCATTTGTCATTTTCGTTCAGAAAGAAAACACCAAGTACCTTCTCGGAG
GCGCTGAACCGAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACCAGAAAGGAGTCCACGACGCTCTGATGATAACTGCTCTACCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGATCCGAGGATGGGACCAGC
CAGTCAAACCCGGAACGTCATGAAGGGTTGCCCGAGACGCATGCACTAACGACCCCTGAGCCACCCCAAAAGCAGTTCGCGGTCTTGGAAGACAAGGTAGAGGGC
ATGCTGCAATGCATGACCCAAGTCGTTCGACAATTCGAGCAACAAGAGTCCGACGAGGCAACGAACCCGGATTTTCAGCAACATAAATCCCCGACACCAAACGGG
GGCAAGAGCAACCAGGATAACCGAAACTTTGAGCCGATAAGCCGCGACAAAGGCAAACCGACAGATCAGCCAGAGTCTTCAGTGAAGAGACATAACCAAAAGGAA
AAGGGATTCGACCTCAAAGAACTTCTTGATCAAGCCGACTCACCATTCACGGAGGAGATCATGAAAGAGAAGGTCCCTCCAAAATTCAATCTACCCACGGTGAAA
CAATTCGACGGGACGACCGACCCAGTGGACCATCTAGATGTTTATCTTGAATGGATGGATATCTACGGGGTGTCAGAGGCGGTCAGGTATCGGGTATTCTCGACT
ACATTAAACGAGTCAGCCAGAATATGGTTCCGACAATTAAAACGAGGGTCAATCTCGAGTTTCAAGAGCCTGGCCAGAGCATTCGTGACCCAGTTTGTAGGGGGA
CGGTGTCGGAGCCGACCCGTGGCTTATCTTTTAACTATTAAACAGAGGACGACAGAGAGTCTACACGACTATGTAGCTCGGTTCAACGAGGAAAAGCTGCAGGTA
GAAGGCCTTACAGACGTTGTATCTCTGCTGGCCTTCATGTCCGGCATCAAGGATGAGCATTTGTCATTTTCGTTCAGAAAGAAAACACCAAGTACCTTCTCGGAG
GCGCTGAACCGAGCTTAG
Protein sequenceShow/hide protein sequence
MTPERSPRRSDDNCSTKRRLNLDDPQVGGSEDGTSQSNPERHEGLPETHALTTPEPPQKQFAVLEDKVEGMLQCMTQVVRQFEQQESDEATNPDFQQHKSPTPNG
GKSNQDNRNFEPISRDKGKPTDQPESSVKRHNQKEKGFDLKELLDQADSPFTEEIMKEKVPPKFNLPTVKQFDGTTDPVDHLDVYLEWMDIYGVSEAVRYRVFST
TLNESARIWFRQLKRGSISSFKSLARAFVTQFVGGRCRSRPVAYLLTIKQRTTESLHDYVARFNEEKLQVEGLTDVVSLLAFMSGIKDEHLSFSFRKKTPSTFSE
ALNRA